RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 ADCYAP1P18509 176 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 HLA-DMBP28068 263 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 ID1P41134 155 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 CSN1S1P47710 185 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 GNG5P63218 68 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 PAFAH1B2P68402 229 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 PSG3Q16557 428 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 C10orf91Q5T1B1 145 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 IGFL4Q6B9Z1 124 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 RBPMS2Q6ZRY4 209 aaKnown RBP12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 RNF182Q8N6D2 247 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 SPATA3Q8NHX4 192 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 C20orf173Q96LM9 149 aa12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 MCRIP2Q9BUT9 160 aaKnown RBP12.91□□□□□ -0.34
HLA-DMA-201ENST00000374843 IGKV3-7A0A075B6H7 116 aa12.9□□□□□ -0.34
HLA-DMA-201ENST00000374843 KRBOX1C9JBD0 128 aa12.9□□□□□ -0.34
HLA-DMA-201ENST00000374843 DIRC3C9JPN6 131 aa12.9□□□□□ -0.34
HLA-DMA-201ENST00000374843 AKR1C3P42330 323 aa12.9□□□□□ -0.34
HLA-DMA-201ENST00000374843 SOHLH1Q5JUK2 328 aa12.9□□□□□ -0.34
HLA-DMA-201ENST00000374843 C9orf66Q5T8R8 295 aa12.9□□□□□ -0.34
HLA-DMA-201ENST00000374843 GBGT1Q8N5D6 347 aa12.9□□□□□ -0.34
HLA-DMA-201ENST00000374843 SEC11CQ9BY50 192 aa12.9□□□□□ -0.34
HLA-DMA-201ENST00000374843 PARLQ9H300 379 aa12.9□□□□□ -0.34
HLA-DMA-201ENST00000374843 KLF12Q9Y4X4 402 aa12.9□□□□□ -0.34
HLA-DMA-201ENST00000374843 TRBV6-1A0A0K0K1D8 114 aa12.89□□□□□ -0.35
HLA-DMA-201ENST00000374843 OR4C46A6NHA9 309 aa12.89□□□□□ -0.35
HLA-DMA-201ENST00000374843 DNASE2O00115 360 aaPredicted RBP12.89□□□□□ -0.35
HLA-DMA-201ENST00000374843 WIPF1O43516 503 aa12.89□□□□□ -0.35
HLA-DMA-201ENST00000374843 FAM74A3Q4VXF1 159 aa12.89□□□□□ -0.35
HLA-DMA-201ENST00000374843 LCN12Q6JVE5 192 aa12.89□□□□□ -0.35
HLA-DMA-201ENST00000374843 FAM24BQ8N5W8 94 aa12.89□□□□□ -0.35
HLA-DMA-201ENST00000374843 DERL1Q9BUN8 251 aa12.89□□□□□ -0.35
HLA-DMA-201ENST00000374843 ZNF256Q9Y2P7 627 aaPredicted RBP12.89□□□□□ -0.35
HLA-DMA-201ENST00000374843 CARHSP1Q9Y2V2 147 aaKnown RBP12.89□□□□□ -0.35
HLA-DMA-201ENST00000374843 RBAKDNA6NC62 111 aa12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 IZUMO1RA6ND01 250 aa12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 S100A9P06702 114 aaKnown RBP12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 CD33P20138 364 aa12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 RPL35P42766 123 aaKnown RBP12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 CNN1P51911 297 aaKnown RBP12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 SNRPD3P62318 126 aaKnown RBP12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 TMEM75Q8N9X5 138 aa12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 LINC00052Q96N35 136 aa12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 MDFIQ99750 246 aa12.88□□□□□ -0.35
HLA-DMA-201ENST00000374843 TRRAPQ9Y4A5 3859 aa12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 FBLL1A6NHQ2 334 aaKnown RBP12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 C9JCJ5 164 aa12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 IGLV2-11P01706 119 aa12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 TFPI2P48307 235 aa12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 TAS2R60P59551 318 aa12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 GOLT1AQ6ZVE7 132 aa12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 ZNF738Q8NE65 137 aa12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 FMC1Q96HJ9 113 aa12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 IGF2BP2-AS1Q96M15 143 aa12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 SMIM7Q9BQ49 75 aa12.87□□□□□ -0.35
HLA-DMA-201ENST00000374843 TRBV20OR9-2A0A075B6H5 130 aa12.86□□□□□ -0.35
HLA-DMA-201ENST00000374843 ZNF705FA8MVS1 300 aaPredicted RBP12.86□□□□□ -0.35
HLA-DMA-201ENST00000374843 PRAC2D3DTV9 90 aa12.86□□□□□ -0.35
HLA-DMA-201ENST00000374843 F8W036 122 aa12.86□□□□□ -0.35
HLA-DMA-201ENST00000374843 K7EQM0 130 aa12.86□□□□□ -0.35
HLA-DMA-201ENST00000374843 ZNF688P0C7X2 276 aa12.86□□□□□ -0.35
HLA-DMA-201ENST00000374843 CEBPGP53567 150 aa12.86□□□□□ -0.35
HLA-DMA-201ENST00000374843 WFDC3Q8IUB2 231 aa12.86□□□□□ -0.35
HLA-DMA-201ENST00000374843 RPH3ALQ9UNE2 315 aa12.86□□□□□ -0.35
HLA-DMA-201ENST00000374843 CMYA5Q8N3K9 4069 aa12.86□□□□□ -0.35
HLA-DMA-201ENST00000374843 IGKV2-40A0A087WW87 121 aaPredicted RBP12.85□□□□□ -0.35
HLA-DMA-201ENST00000374843 ZNF727A8MUV8 499 aa12.85□□□□□ -0.35
HLA-DMA-201ENST00000374843 IGKV2D-40P01614 121 aaPredicted RBP12.85□□□□□ -0.35
HLA-DMA-201ENST00000374843 BEAN1Q3B7T3 259 aa12.85□□□□□ -0.35
HLA-DMA-201ENST00000374843 Q86TA4 180 aa12.85□□□□□ -0.35
HLA-DMA-201ENST00000374843 LINC00479Q96M42 142 aa12.85□□□□□ -0.35
HLA-DMA-201ENST00000374843 FAM110AQ9BQ89 295 aa12.85□□□□□ -0.35
HLA-DMA-201ENST00000374843 ZNF674Q2M3X9 581 aa12.84□□□□□ -0.35
HLA-DMA-201ENST00000374843 CENPWQ5EE01 88 aa12.84□□□□□ -0.35
HLA-DMA-201ENST00000374843 PSMG4Q5JS54 123 aa12.84□□□□□ -0.35
HLA-DMA-201ENST00000374843 C9orf47Q6ZRZ4 202 aa12.84□□□□□ -0.35
HLA-DMA-201ENST00000374843 SMIM12Q96EX1 92 aa12.84□□□□□ -0.35
HLA-DMA-201ENST00000374843 NIPSNAP3BQ9BS92 247 aa12.84□□□□□ -0.35
HLA-DMA-201ENST00000374843 GPR61Q9BZJ8 451 aa12.84□□□□□ -0.35
HLA-DMA-201ENST00000374843 MAP6D1Q9H9H5 199 aa12.84□□□□□ -0.35
HLA-DMA-201ENST00000374843 LY96Q9Y6Y9 160 aa12.84□□□□□ -0.35
HLA-DMA-201ENST00000374843 TRAV8-1A0A0A6YYK1 113 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 TRAV34A0A0B4J273 112 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 NPIPB6E9PJ23 425 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 LTAP01374 205 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 S100A1P23297 94 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 UBE2G1P62253 170 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 FLI1Q01543 452 aaPredicted RBP12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 GUCA2BQ16661 112 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 KRTAP21-3Q3LHN1 58 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 OR8A1Q8NGG7 326 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 PPP1R14DQ9NXH3 145 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 NAT8Q9UHE5 227 aa12.83□□□□□ -0.36
HLA-DMA-201ENST00000374843 GNG4P50150 75 aa12.82□□□□□ -0.36
HLA-DMA-201ENST00000374843 ODF3L2Q3SX64 289 aa12.82□□□□□ -0.36
HLA-DMA-201ENST00000374843 PRR31Q5SQ13 230 aa12.82□□□□□ -0.36
HLA-DMA-201ENST00000374843 FOXI2Q6ZQN5 318 aa12.82□□□□□ -0.36
HLA-DMA-201ENST00000374843 VGLL1Q99990 258 aa12.82□□□□□ -0.36
HLA-DMA-201ENST00000374843 PSG8Q9UQ74 426 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms