RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 MORN3Q6PF18 240 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-201ENST00000374673 RPUSD4Q96CM3 377 aaKnown RBP11.04□□□□□ -0.64
HSPG2-201ENST00000374673 ASCL2Q99929 193 aa11.04□□□□□ -0.64
HSPG2-201ENST00000374673 TM2D3Q9BRN9 247 aa11.04□□□□□ -0.64
HSPG2-201ENST00000374673 TMEM167BQ9NRX6 74 aa11.04□□□□□ -0.64
HSPG2-201ENST00000374673 MAP1LC3B2A6NCE7 125 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 A8MTW9 85 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 ZNF705FA8MVS1 300 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-201ENST00000374673 UBE2CO00762 179 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 DUSP14O95147 198 aaKnown RBP11.03□□□□□ -0.64
HSPG2-201ENST00000374673 FHITP49789 147 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 RAB5CP51148 216 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 ICAM4Q14773 271 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 EXOC3-AS1Q8N2X6 119 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 OR8A1Q8NGG7 326 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 MAP1LC3BQ9GZQ8 125 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 CSTL1Q9H114 145 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 Q9H3A6 140 aa11.03□□□□□ -0.64
HSPG2-201ENST00000374673 M0R3E3 92 aa11.02□□□□□ -0.65
HSPG2-201ENST00000374673 NHLRC4P0CG21 123 aaPredicted RBP11.02□□□□□ -0.65
HSPG2-201ENST00000374673 SULT1A2P50226 295 aa11.02□□□□□ -0.65
HSPG2-201ENST00000374673 RANP62826 216 aaKnown RBP11.02□□□□□ -0.65
HSPG2-201ENST00000374673 FAM213BQ8TBF2 198 aa11.02□□□□□ -0.65
HSPG2-201ENST00000374673 MBD3L1Q8WWY6 194 aa11.02□□□□□ -0.65
HSPG2-201ENST00000374673 BOLA1Q9Y3E2 137 aa11.02□□□□□ -0.65
HSPG2-201ENST00000374673 PRAC2D3DTV9 90 aa11.01□□□□□ -0.65
HSPG2-201ENST00000374673 CNN1P51911 297 aaKnown RBP11.01□□□□□ -0.65
HSPG2-201ENST00000374673 FGF8P55075 233 aaPredicted RBP11.01□□□□□ -0.65
HSPG2-201ENST00000374673 NUTF2P61970 127 aaKnown RBP11.01□□□□□ -0.65
HSPG2-201ENST00000374673 Q6ZWC4 215 aa11.01□□□□□ -0.65
HSPG2-201ENST00000374673 OR4B1Q8NGF8 309 aa11.01□□□□□ -0.65
HSPG2-201ENST00000374673 SPATA25Q9BR10 227 aa11.01□□□□□ -0.65
HSPG2-201ENST00000374673 OTORQ9NRC9 128 aa11.01□□□□□ -0.65
HSPG2-201ENST00000374673 BOLA2-SMG1P6H3BVE0 249 aa11□□□□□ -0.65
HSPG2-201ENST00000374673 CA1P00915 261 aaPredicted RBP11□□□□□ -0.65
HSPG2-201ENST00000374673 ZNF705DP0CH99 300 aaPredicted RBP11□□□□□ -0.65
HSPG2-201ENST00000374673 ZNF705BP0CI00 300 aaPredicted RBP11□□□□□ -0.65
HSPG2-201ENST00000374673 HIST1H1AQ02539 215 aaPredicted RBP11□□□□□ -0.65
HSPG2-201ENST00000374673 FAM74A1Q5RGS3 127 aa11□□□□□ -0.65
HSPG2-201ENST00000374673 AMTNQ6UX39 209 aa11□□□□□ -0.65
HSPG2-201ENST00000374673 ZMAT4Q9H898 229 aa11□□□□□ -0.65
HSPG2-201ENST00000374673 PGPA6NDG6 321 aa10.99□□□□□ -0.65
HSPG2-201ENST00000374673 IGKV3-20P01619 116 aa10.99□□□□□ -0.65
HSPG2-201ENST00000374673 GIG44P09565 113 aaPredicted RBP10.99□□□□□ -0.65
HSPG2-201ENST00000374673 H2AFB1P0C5Y9 115 aa10.99□□□□□ -0.65
HSPG2-201ENST00000374673 IQCF2Q8IXL9 164 aa10.99□□□□□ -0.65
HSPG2-201ENST00000374673 ARL6IP6Q8N6S5 226 aa10.99□□□□□ -0.65
HSPG2-201ENST00000374673 OR10J6PQ8NGY7 276 aa10.99□□□□□ -0.65
HSPG2-201ENST00000374673 RXFP4Q8TDU9 374 aa10.99□□□□□ -0.65
HSPG2-201ENST00000374673 TMPRSS5Q9H3S3 457 aa10.99□□□□□ -0.65
HSPG2-201ENST00000374673 TP53TG1Q9Y2A0 90 aa10.99□□□□□ -0.65
HSPG2-201ENST00000374673 A0A1W2PRE2 83 aa10.98□□□□□ -0.65
HSPG2-201ENST00000374673 NPIPB6E9PJ23 425 aa10.98□□□□□ -0.65
HSPG2-201ENST00000374673 PRB4P10163 310 aaPredicted RBP10.98□□□□□ -0.65
HSPG2-201ENST00000374673 CSN1S1P47710 185 aa10.98□□□□□ -0.65
HSPG2-201ENST00000374673 DEFB135Q30KP9 77 aa10.98□□□□□ -0.65
HSPG2-201ENST00000374673 SFT2D1Q8WV19 159 aa10.98□□□□□ -0.65
HSPG2-201ENST00000374673 C1QTNF4Q9BXJ3 329 aa10.98□□□□□ -0.65
HSPG2-201ENST00000374673 RBAKDNA6NC62 111 aa10.97□□□□□ -0.65
HSPG2-201ENST00000374673 ALKAL2Q6UX46 152 aa10.97□□□□□ -0.65
HSPG2-201ENST00000374673 CMTM2Q8TAZ6 248 aa10.97□□□□□ -0.65
HSPG2-201ENST00000374673 RNF183Q96D59 192 aa10.97□□□□□ -0.65
HSPG2-201ENST00000374673 OVOL2Q9BRP0 275 aa10.97□□□□□ -0.65
HSPG2-201ENST00000374673 SLC35B3Q9H1N7 401 aa10.97□□□□□ -0.65
HSPG2-201ENST00000374673 ARL2-SNX15V9GYD0 113 aa10.97□□□□□ -0.65
HSPG2-201ENST00000374673 DNAH9Q9NYC9 4486 aa10.97□□□□□ -0.65
HSPG2-201ENST00000374673 TRAV1-1A0A0B4J248 108 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 GGTLC3B5MD39 225 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 DIRC3C9JPN6 131 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 SPRY2O43597 315 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 AMBPP02760 352 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 SLC25A5P05141 298 aaKnown RBP10.96□□□□□ -0.65
HSPG2-201ENST00000374673 C9orf47Q6ZRZ4 202 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 C5orf17Q8NAS9 161 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 CSNK1G2-AS1Q8NCQ2 148 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 LINC00477Q96M19 166 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 RCHY1Q96PM5 261 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 ODF3Q96PU9 254 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 RETNQ9HD89 108 aa10.96□□□□□ -0.65
HSPG2-201ENST00000374673 IGKV2-40A0A087WW87 121 aaPredicted RBP10.95□□□□□ -0.66
HSPG2-201ENST00000374673 FAM74A7A6NL05 159 aa10.95□□□□□ -0.66
HSPG2-201ENST00000374673 IGKV2D-40P01614 121 aaPredicted RBP10.95□□□□□ -0.66
HSPG2-201ENST00000374673 HBE1P02100 147 aa10.95□□□□□ -0.66
HSPG2-201ENST00000374673 FXYD7P58549 80 aa10.95□□□□□ -0.66
HSPG2-201ENST00000374673 SUMO1P63165 101 aaKnown RBP10.95□□□□□ -0.66
HSPG2-201ENST00000374673 NKX6-2Q9C056 277 aaPredicted RBP10.95□□□□□ -0.66
HSPG2-201ENST00000374673 PPP1R14DQ9NXH3 145 aa10.95□□□□□ -0.66
HSPG2-201ENST00000374673 XCL2Q9UBD3 114 aa10.95□□□□□ -0.66
HSPG2-201ENST00000374673 YTHDF2Q9Y5A9 579 aaKnown RBP10.95□□□□□ -0.66
HSPG2-201ENST00000374673 A0A1B0GV50 99 aa10.94□□□□□ -0.66
HSPG2-201ENST00000374673 SERTM2A0A1B0GWG4 89 aa10.94□□□□□ -0.66
HSPG2-201ENST00000374673 ZNF705EA8MWA4 302 aaPredicted RBP10.94□□□□□ -0.66
HSPG2-201ENST00000374673 TEX46H3BTG2 121 aa10.94□□□□□ -0.66
HSPG2-201ENST00000374673 CT45A10P0DMU9 189 aa10.94□□□□□ -0.66
HSPG2-201ENST00000374673 PPT1P50897 306 aa10.94□□□□□ -0.66
HSPG2-201ENST00000374673 UBE2G2P60604 165 aa10.94□□□□□ -0.66
HSPG2-201ENST00000374673 ERCC8Q13216 396 aa10.94□□□□□ -0.66
HSPG2-201ENST00000374673 SPINK13Q1W4C9 94 aa10.94□□□□□ -0.66
HSPG2-201ENST00000374673 VGLL1Q99990 258 aa10.94□□□□□ -0.66
HSPG2-201ENST00000374673 AGPAT4-IT1Q9H0P7 198 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms