RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 STAG3L3P0CL85 134 aa11.23□□□□□ -0.61
PFDN6-202ENST00000374607 NKX2-5P52952 324 aaPredicted RBP11.23□□□□□ -0.61
PFDN6-202ENST00000374607 ICAM4Q14773 271 aa11.23□□□□□ -0.61
PFDN6-202ENST00000374607 GDF5OSQ5U4N7 250 aa11.23□□□□□ -0.61
PFDN6-202ENST00000374607 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
PFDN6-202ENST00000374607 EXOC3-AS1Q8N2X6 119 aa11.23□□□□□ -0.61
PFDN6-202ENST00000374607 C9orf62Q8N4C0 152 aa11.23□□□□□ -0.61
PFDN6-202ENST00000374607 STOML3Q8TAV4 291 aa11.23□□□□□ -0.61
PFDN6-202ENST00000374607 FAM213BQ8TBF2 198 aa11.23□□□□□ -0.61
PFDN6-202ENST00000374607 TMED6Q8WW62 240 aa11.23□□□□□ -0.61
PFDN6-202ENST00000374607 A0A0J9YX75 114 aa11.22□□□□□ -0.61
PFDN6-202ENST00000374607 ZNF705FA8MVS1 300 aaPredicted RBP11.22□□□□□ -0.61
PFDN6-202ENST00000374607 ZNF705DP0CH99 300 aaPredicted RBP11.22□□□□□ -0.61
PFDN6-202ENST00000374607 ZNF705BP0CI00 300 aaPredicted RBP11.22□□□□□ -0.61
PFDN6-202ENST00000374607 CMTM2Q8TAZ6 248 aa11.22□□□□□ -0.61
PFDN6-202ENST00000374607 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
PFDN6-202ENST00000374607 TMEM167BQ9NRX6 74 aa11.22□□□□□ -0.61
PFDN6-202ENST00000374607 NDUFB4O95168 129 aa11.21□□□□□ -0.61
PFDN6-202ENST00000374607 PRB4P10163 310 aaPredicted RBP11.21□□□□□ -0.61
PFDN6-202ENST00000374607 GCHFRP30047 84 aa11.21□□□□□ -0.61
PFDN6-202ENST00000374607 DEFB135Q30KP9 77 aa11.21□□□□□ -0.61
PFDN6-202ENST00000374607 DPPA3Q6W0C5 159 aa11.21□□□□□ -0.61
PFDN6-202ENST00000374607 LYPD1Q8N2G4 141 aa11.21□□□□□ -0.61
PFDN6-202ENST00000374607 OR8A1Q8NGG7 326 aa11.21□□□□□ -0.61
PFDN6-202ENST00000374607 MRPL53Q96EL3 112 aaKnown RBP11.21□□□□□ -0.61
PFDN6-202ENST00000374607 ZNF503Q96F45 646 aa11.21□□□□□ -0.61
PFDN6-202ENST00000374607 PHYHIPLQ96FC7 376 aa11.21□□□□□ -0.61
PFDN6-202ENST00000374607 RCHY1Q96PM5 261 aa11.21□□□□□ -0.61
PFDN6-202ENST00000374607 Q9H3A6 140 aa11.21□□□□□ -0.61
PFDN6-202ENST00000374607 MAP1LC3B2A6NCE7 125 aa11.2□□□□□ -0.62
PFDN6-202ENST00000374607 SPRY2O43597 315 aa11.2□□□□□ -0.62
PFDN6-202ENST00000374607 CNN1P51911 297 aaKnown RBP11.2□□□□□ -0.62
PFDN6-202ENST00000374607 FGF8P55075 233 aaPredicted RBP11.2□□□□□ -0.62
PFDN6-202ENST00000374607 FXYD7P58549 80 aa11.2□□□□□ -0.62
PFDN6-202ENST00000374607 Q6ZWC4 215 aa11.2□□□□□ -0.62
PFDN6-202ENST00000374607 TM2D3Q9BRN9 247 aa11.2□□□□□ -0.62
PFDN6-202ENST00000374607 MAP1LC3BQ9GZQ8 125 aa11.2□□□□□ -0.62
PFDN6-202ENST00000374607 PGPA6NDG6 321 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 TEX46H3BTG2 121 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 M0R3E3 92 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 RAB5CP51148 216 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 SSX7Q7RTT5 188 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 RXFP4Q8TDU9 374 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 SFT2D1Q8WV19 159 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 RETNQ9HD89 108 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 XCL2Q9UBD3 114 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 RPH3ALQ9UNE2 315 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 U3KQK5 164 aa11.19□□□□□ -0.62
PFDN6-202ENST00000374607 H2AFB1P0C5Y9 115 aa11.18□□□□□ -0.62
PFDN6-202ENST00000374607 FHITP49789 147 aa11.18□□□□□ -0.62
PFDN6-202ENST00000374607 ZNF726P1Q15940 193 aa11.18□□□□□ -0.62
PFDN6-202ENST00000374607 OTORQ9NRC9 128 aa11.18□□□□□ -0.62
PFDN6-202ENST00000374607 A0A1B0GV50 99 aa11.17□□□□□ -0.62
PFDN6-202ENST00000374607 PRAC2D3DTV9 90 aa11.17□□□□□ -0.62
PFDN6-202ENST00000374607 SLC25A5P05141 298 aaKnown RBP11.17□□□□□ -0.62
PFDN6-202ENST00000374607 TMEM78Q5T7P6 136 aa11.17□□□□□ -0.62
PFDN6-202ENST00000374607 CLUHP3Q96NS8 147 aa11.17□□□□□ -0.62
PFDN6-202ENST00000374607 SLC35B3Q9H1N7 401 aa11.17□□□□□ -0.62
PFDN6-202ENST00000374607 TP53TG1Q9Y2A0 90 aa11.17□□□□□ -0.62
PFDN6-202ENST00000374607 AMBPP02760 352 aa11.16□□□□□ -0.62
PFDN6-202ENST00000374607 TSPOP30536 169 aa11.16□□□□□ -0.62
PFDN6-202ENST00000374607 UBE2G2P60604 165 aa11.16□□□□□ -0.62
PFDN6-202ENST00000374607 SPINK13Q1W4C9 94 aa11.16□□□□□ -0.62
PFDN6-202ENST00000374607 RNF183Q96D59 192 aa11.16□□□□□ -0.62
PFDN6-202ENST00000374607 RARRES2Q99969 163 aa11.16□□□□□ -0.62
PFDN6-202ENST00000374607 TMEM208Q9BTX3 173 aa11.16□□□□□ -0.62
PFDN6-202ENST00000374607 TMPRSS5Q9H3S3 457 aa11.16□□□□□ -0.62
PFDN6-202ENST00000374607 IGHV3OR16-12A0A075B7B8 117 aa11.15□□□□□ -0.62
PFDN6-202ENST00000374607 IGKV2-40A0A087WW87 121 aaPredicted RBP11.15□□□□□ -0.62
PFDN6-202ENST00000374607 BOLA2-SMG1P6H3BVE0 249 aa11.15□□□□□ -0.62
PFDN6-202ENST00000374607 K7EQM0 130 aa11.15□□□□□ -0.62
PFDN6-202ENST00000374607 IFNA7P01567 189 aa11.15□□□□□ -0.62
PFDN6-202ENST00000374607 IGKV2D-40P01614 121 aaPredicted RBP11.15□□□□□ -0.62
PFDN6-202ENST00000374607 SULT1A2P50226 295 aa11.15□□□□□ -0.62
PFDN6-202ENST00000374607 SUMO1P63165 101 aaKnown RBP11.15□□□□□ -0.62
PFDN6-202ENST00000374607 LINC00477Q96M19 166 aa11.15□□□□□ -0.62
PFDN6-202ENST00000374607 OVOL2Q9BRP0 275 aa11.15□□□□□ -0.62
PFDN6-202ENST00000374607 PLA2G2EQ9NZK7 142 aa11.15□□□□□ -0.62
PFDN6-202ENST00000374607 ZNF705EA8MWA4 302 aaPredicted RBP11.14□□□□□ -0.63
PFDN6-202ENST00000374607 M0R2Z0 102 aa11.14□□□□□ -0.63
PFDN6-202ENST00000374607 LEPP41159 167 aa11.14□□□□□ -0.63
PFDN6-202ENST00000374607 ERCC8Q13216 396 aa11.14□□□□□ -0.63
PFDN6-202ENST00000374607 ALKAL2Q6UX46 152 aa11.14□□□□□ -0.63
PFDN6-202ENST00000374607 OR11H2Q8NH07 326 aa11.14□□□□□ -0.63
PFDN6-202ENST00000374607 NKX6-2Q9C056 277 aaPredicted RBP11.14□□□□□ -0.63
PFDN6-202ENST00000374607 GOLT1BQ9Y3E0 138 aa11.14□□□□□ -0.63
PFDN6-202ENST00000374607 A0A1W2PRE2 83 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 DIRC3C9JPN6 131 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 NPIPB6E9PJ23 425 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 J3KRW8 73 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 INSP01308 110 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 HBE1P02100 147 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 CDKN1BP46527 198 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 PPT1P50897 306 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 DMRTA1Q5VZB9 504 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 CST9LP1Q5W188 147 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 C5orf17Q8NAS9 161 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 SUN5Q8TC36 379 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 MBD3L1Q8WWY6 194 aa11.13□□□□□ -0.63
PFDN6-202ENST00000374607 AGRNO00468 2067 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms