RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 IGHV1-69P01742 117 aa17.8■□□□□ 0.44
TM9SF3-201ENST00000371142 TMEM14BQ9NUH8 114 aa17.8■□□□□ 0.44
TM9SF3-201ENST00000371142 ANAPC10Q9UM13 185 aa17.79■□□□□ 0.44
TM9SF3-201ENST00000371142 NDUFA4L2Q9NRX3 87 aa17.79■□□□□ 0.44
TM9SF3-201ENST00000371142 K7ENP7 123 aa17.79■□□□□ 0.44
TM9SF3-201ENST00000371142 DLEU1O43261 78 aa17.78■□□□□ 0.44
TM9SF3-201ENST00000371142 PFN1P07737 140 aaKnown RBP17.78■□□□□ 0.44
TM9SF3-201ENST00000371142 OVOL2Q9BRP0 275 aa17.78■□□□□ 0.44
TM9SF3-201ENST00000371142 A0A1B0GUS0 222 aa17.78■□□□□ 0.44
TM9SF3-201ENST00000371142 C9JAW5 83 aa17.78■□□□□ 0.44
TM9SF3-201ENST00000371142 CYYR1Q96J86 154 aa17.78■□□□□ 0.44
TM9SF3-201ENST00000371142 KLF12Q9Y4X4 402 aa17.78■□□□□ 0.44
TM9SF3-201ENST00000371142 ZNF664Q8N3J9 261 aa17.78■□□□□ 0.44
TM9SF3-201ENST00000371142 DAD1P61803 113 aa17.77■□□□□ 0.44
TM9SF3-201ENST00000371142 Q6ZR03 302 aa17.77■□□□□ 0.44
TM9SF3-201ENST00000371142 TRAV12-2A0A075B6T6 113 aa17.77■□□□□ 0.44
TM9SF3-201ENST00000371142 ZNF833PQ6ZTB9 187 aa17.77■□□□□ 0.44
TM9SF3-201ENST00000371142 TRAV26-2A0A0B4J265 109 aa17.77■□□□□ 0.44
TM9SF3-201ENST00000371142 ZNF124Q15973 351 aa17.76■□□□□ 0.43
TM9SF3-201ENST00000371142 EDA2RQ9HAV5 297 aa17.76■□□□□ 0.43
TM9SF3-201ENST00000371142 AZU1P20160 251 aa17.76■□□□□ 0.43
TM9SF3-201ENST00000371142 Q71RC1 249 aaPredicted RBP17.76■□□□□ 0.43
TM9SF3-201ENST00000371142 IGHV3-38A0A0C4DH36 116 aa17.76■□□□□ 0.43
TM9SF3-201ENST00000371142 IGHV2-70DA0A0C4DH43 119 aa17.76■□□□□ 0.43
TM9SF3-201ENST00000371142 C17orf58Q2M2W7 97 aa17.76■□□□□ 0.43
TM9SF3-201ENST00000371142 CEP250Q9BV73 2442 aa17.76■□□□□ 0.43
TM9SF3-201ENST00000371142 YPEL3P61236 119 aaPredicted RBP17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 PMVKQ15126 192 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 ZNF561-AS1K7EIQ3 104 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 GATA3P23771 443 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 DNAJC30Q96LL9 226 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 ZNF492Q9P255 531 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 PFN2P35080 140 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 GATA4P43694 442 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 GTSF1LQ9H1H1 148 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 WISP1O95388 367 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 C8orf86Q6ZUL3 223 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 TRBV19A0A075B6N1 114 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 PRSS46E5RG02 174 aa17.75■□□□□ 0.43
TM9SF3-201ENST00000371142 GAGE12BA1L429 117 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 C9JQL5 133 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 GAGE7O76087 117 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 GAGE12FP0CL80 117 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 GAGE12GP0CL81 117 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 GAGE12IP0CL82 117 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 Q8TCH9 128 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 SBF1O95248 1867 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 TRBV25-1A0A075B6N4 114 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 WDR86Q86TI4 376 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 ZNF114Q8NC26 417 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 MST1LQ2TV78 715 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 I3L3M4 83 aa17.74■□□□□ 0.43
TM9SF3-201ENST00000371142 LMO1P25800 156 aa17.73■□□□□ 0.43
TM9SF3-201ENST00000371142 PAX9P55771 341 aa17.73■□□□□ 0.43
TM9SF3-201ENST00000371142 C2orf66Q6UXQ4 117 aa17.73■□□□□ 0.43
TM9SF3-201ENST00000371142 TPSG1Q9NRR2 321 aa17.73■□□□□ 0.43
TM9SF3-201ENST00000371142 PHF3Q92576 2039 aaKnown RBP17.73■□□□□ 0.43
TM9SF3-201ENST00000371142 ADAMTSL5Q6ZMM2 481 aa17.73■□□□□ 0.43
TM9SF3-201ENST00000371142 YLPM1P49750 1951 aaKnown RBP17.72■□□□□ 0.43
TM9SF3-201ENST00000371142 ZNF503-AS2A6NEH8 195 aa17.72■□□□□ 0.43
TM9SF3-201ENST00000371142 TEX36Q5VZQ5 186 aa17.72■□□□□ 0.43
TM9SF3-201ENST00000371142 FAM104BQ5XKR9 115 aa17.72■□□□□ 0.43
TM9SF3-201ENST00000371142 C18orf32Q8TCD1 76 aa17.72■□□□□ 0.43
TM9SF3-201ENST00000371142 HEATR1Q9H583 2144 aaKnown RBP17.72■□□□□ 0.43
TM9SF3-201ENST00000371142 ANXA2RQ3ZCQ2 193 aa17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 NEGR1Q7Z3B1 354 aa17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 KIAA2026Q5HYC2 2103 aa17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 GVINP1Q7Z2Y8 2422 aa17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 IGHV1OR15-1A0A075B7D0 117 aa17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 UBE2V1Q13404 147 aa17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 TCTEX1D4Q5JR98 221 aa17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 LOXP28300 417 aaPredicted RBP17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 PROK2Q9HC23 129 aa17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 RHODO00212 210 aa17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 Q8N8P6 123 aa17.71■□□□□ 0.43
TM9SF3-201ENST00000371142 GAGE6Q13070 117 aa17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 MYO7BQ6PIF6 2116 aa17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 ZNRF2Q8NHG8 242 aa17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 TMEM141Q96I45 108 aa17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 RPL32P62910 135 aaKnown RBP17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 Q0VG73 95 aa17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 CD5LO43866 347 aa17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 TCF15Q12870 199 aa17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 ASPHD1Q5U4P2 390 aa17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 POLR3KQ9Y2Y1 108 aaPredicted RBP17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 CR1LQ2VPA4 569 aa17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 MRPL51Q4U2R6 128 aaKnown RBP17.7■□□□□ 0.42
TM9SF3-201ENST00000371142 SNHG12Q9BXW3 62 aa17.69■□□□□ 0.42
TM9SF3-201ENST00000371142 CEACAM8P31997 349 aaPredicted RBP17.69■□□□□ 0.42
TM9SF3-201ENST00000371142 FANCMQ8IYD8 2048 aa17.69■□□□□ 0.42
TM9SF3-201ENST00000371142 POLEQ07864 2286 aa17.69■□□□□ 0.42
TM9SF3-201ENST00000371142 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.69■□□□□ 0.42
TM9SF3-201ENST00000371142 PRSS57Q6UWY2 283 aa17.69■□□□□ 0.42
TM9SF3-201ENST00000371142 DIAPH2-AS1Q14236 149 aa17.68■□□□□ 0.42
TM9SF3-201ENST00000371142 FAM120AOSQ5T036 256 aa17.68■□□□□ 0.42
TM9SF3-201ENST00000371142 LY6G6EA0A0G2JKS1 128 aa17.68■□□□□ 0.42
TM9SF3-201ENST00000371142 ZNF726P1Q15940 193 aa17.68■□□□□ 0.42
TM9SF3-201ENST00000371142 U3KQA8 63 aa17.68■□□□□ 0.42
TM9SF3-201ENST00000371142 PTPRDP23468 1912 aa17.68■□□□□ 0.42
TM9SF3-201ENST00000371142 A0A096LPF7 62 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms