RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 TMEM241Q24JQ0 296 aa6.69□□□□□ -1.34
SNX27-201ENST00000368838 FAM106AQ4KMX7 169 aa6.69□□□□□ -1.34
SNX27-201ENST00000368838 COX8CQ7Z4L0 72 aa6.69□□□□□ -1.34
SNX27-201ENST00000368838 WFDC9Q8NEX5 89 aa6.69□□□□□ -1.34
SNX27-201ENST00000368838 MRPL53Q96EL3 112 aaKnown RBP6.69□□□□□ -1.34
SNX27-201ENST00000368838 MS4A10Q96PG2 267 aa6.69□□□□□ -1.34
SNX27-201ENST00000368838 DUX3Q96PT4 197 aa6.69□□□□□ -1.34
SNX27-201ENST00000368838 ELOVL1Q9BW60 279 aa6.69□□□□□ -1.34
SNX27-201ENST00000368838 PARLQ9H300 379 aa6.69□□□□□ -1.34
SNX27-201ENST00000368838 C19orf73Q9NVV2 129 aa6.69□□□□□ -1.34
SNX27-201ENST00000368838 TSSC4Q9Y5U2 329 aaPredicted RBP6.69□□□□□ -1.34
SNX27-201ENST00000368838 A0A1B0GV50 99 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 ZNF785A8K8V0 405 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 ZNF727A8MUV8 499 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 TSPAN4O14817 238 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 NDUFB4O95168 129 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 ATP5G3P48201 142 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 CST9LP1Q5W188 147 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 SIGLEC15Q6ZMC9 328 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 C4orf3Q8WVX3 66 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 SMIM7Q9BQ49 75 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 SLC50A1Q9BRV3 221 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 DAZ1Q9NQZ3 744 aaKnown RBP6.68□□□□□ -1.34
SNX27-201ENST00000368838 PPP1R14DQ9NXH3 145 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 ZNF586Q9NXT0 402 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 UFC1Q9Y3C8 167 aa6.68□□□□□ -1.34
SNX27-201ENST00000368838 OR10J4P0C629 311 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 PYYP10082 97 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 GALR1P47211 349 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 DEFA5Q01523 94 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 TMEM183BQ1AE95 376 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 LCNL1Q6ZST4 164 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 LINC00482Q8N8I6 264 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 GLMPQ8WWB7 406 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 GRAMD2BQ96HH9 432 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 ATG101Q9BSB4 218 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 EPDR1Q9UM22 224 aa6.67□□□□□ -1.34
SNX27-201ENST00000368838 SORL1Q92673 2214 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 C7orf77A4D0Y5 90 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 RBAKDNA6NC62 111 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 HELTA6NFD8 242 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 PPP1R2P9O14990 202 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 SLC25A5P05141 298 aaKnown RBP6.66□□□□□ -1.34
SNX27-201ENST00000368838 FHL3Q13643 280 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 KLF5Q13887 457 aaPredicted RBP6.66□□□□□ -1.34
SNX27-201ENST00000368838 DEFB136Q30KP8 78 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 LINC01551Q86U37 167 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 OR8I2Q8N0Y5 310 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 KLHL30-AS1Q8NEE0 82 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 C17orf77Q96MU5 243 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 IMMP2LQ96T52 175 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 ZNF331Q9NQX6 463 aaPredicted RBP6.66□□□□□ -1.34
SNX27-201ENST00000368838 SIGLEC8Q9NYZ4 499 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 S4R3C0 116 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 TENM3Q9P273 2699 aa6.66□□□□□ -1.34
SNX27-201ENST00000368838 TRBV20OR9-2A0A075B6H5 130 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 TRAV2A0A0B4J234 112 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 IGHV7-4-1A0A0J9YVY3 117 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 PGPA6NDG6 321 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 PEX7O00628 323 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 EIF3GO75821 320 aaKnown RBP eCLIP6.65□□□□□ -1.35
SNX27-201ENST00000368838 IGHV3-23P01764 117 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 MT-ND4LP03901 98 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 TCRAP04437 139 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 CNN1P51911 297 aaKnown RBP6.65□□□□□ -1.35
SNX27-201ENST00000368838 UBE2G2P60604 165 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 RPL23P62829 140 aaKnown RBP6.65□□□□□ -1.35
SNX27-201ENST00000368838 FAM231DQ6ZW35 169 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 TMEM75Q8N9X5 138 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 FMC1Q96HJ9 113 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 BTF3L4Q96K17 158 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 IGF2BP2-AS1Q96M15 143 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 MLST8Q9BVC4 326 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 Q9H3A6 140 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 AAMDCQ9H7C9 122 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 BIN3Q9NQY0 253 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 SMCO4Q9NRQ5 59 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 SMPXQ9UHP9 88 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 ZFP30Q9Y2G7 519 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 SMAD5-AS1Q9Y6J3 95 aa6.65□□□□□ -1.35
SNX27-201ENST00000368838 TRBV7-9A0A0J9YWB2 115 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 SCO2A0A1W2PP80 73 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 PPP5D1E7EU14 171 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 K7EQM0 130 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 DNASE2O00115 360 aaPredicted RBP6.64□□□□□ -1.35
SNX27-201ENST00000368838 GCGP01275 180 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 TRBV12-3P01733 135 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 RPL35P42766 123 aaKnown RBP6.64□□□□□ -1.35
SNX27-201ENST00000368838 RANP62826 216 aaKnown RBP6.64□□□□□ -1.35
SNX27-201ENST00000368838 ATRAIDQ6UW56 229 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 UNQ9165/PRO28630Q6UXU0 137 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 DPF1Q92782 380 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 ISOC2Q96AB3 205 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 GNB4Q9HAV0 340 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 MLXQ9UH92 298 aa6.64□□□□□ -1.35
SNX27-201ENST00000368838 TRAV9-1A0A075B6T8 112 aa6.63□□□□□ -1.35
SNX27-201ENST00000368838 TMEM213A2RRL7 107 aa6.63□□□□□ -1.35
SNX27-201ENST00000368838 ISLRO14498 428 aa6.63□□□□□ -1.35
SNX27-201ENST00000368838 SOCS3O14543 225 aa6.63□□□□□ -1.35
SNX27-201ENST00000368838 CHEK1O14757 476 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms