RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 OTORQ9NRC9 128 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 PRELID1Q9Y255 219 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 LY96Q9Y6Y9 160 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 U3KQE9 123 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 TRBV19A0A075B6N1 114 aa8.53□□□□□ -1.04
CSNK1E-202ENST00000366216 BUB3O43684 328 aa8.53□□□□□ -1.04
CSNK1E-202ENST00000366216 GGCTO75223 188 aaKnown RBP8.53□□□□□ -1.04
CSNK1E-202ENST00000366216 RANP62826 216 aaKnown RBP8.53□□□□□ -1.04
CSNK1E-202ENST00000366216 C5orf17Q8NAS9 161 aa8.53□□□□□ -1.04
CSNK1E-202ENST00000366216 METTL26Q96S19 204 aa8.53□□□□□ -1.04
CSNK1E-202ENST00000366216 DERL1Q9BUN8 251 aa8.53□□□□□ -1.04
CSNK1E-202ENST00000366216 CTDSP1Q9GZU7 261 aa8.53□□□□□ -1.04
CSNK1E-202ENST00000366216 Q9H3A6 140 aa8.53□□□□□ -1.04
CSNK1E-202ENST00000366216 TMEM242Q9NWH2 141 aa8.53□□□□□ -1.04
CSNK1E-202ENST00000366216 IGHV3-35A0A0C4DH35 117 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 RBMY1BA6NDE4 496 aaKnown RBP8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 PGPA6NDG6 321 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 RBMY1EA6NEQ0 496 aaKnown RBP8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 HELTA6NFD8 242 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 PEX7O00628 323 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 TSPAN4O14817 238 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 ZNF253O75346 499 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 TRBV12-3P01733 135 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 IGHV3-11P01762 117 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 RBMY1DP0C7P1 496 aaKnown RBP8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 RPL35P42766 123 aaKnown RBP8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 TAS2R60P59551 318 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 TMEM88Q6PEY1 159 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 LINC01551Q86U37 167 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 CBLN2Q8IUK8 224 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 SBSPONQ8IVN8 264 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 OR8I2Q8N0Y5 310 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 PEF1Q9UBV8 284 aaKnown RBP8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 EPDR1Q9UM22 224 aa8.52□□□□□ -1.05
CSNK1E-202ENST00000366216 TRBV20OR9-2A0A075B6H5 130 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 A0A087X0K7 114 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 TMEM238LA0A1B0GVL6 79 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 CXorf65A6NEN9 183 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 MT-ND4LP03901 98 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 SLC25A5P05141 298 aaKnown RBP8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 S100A9P06702 114 aaKnown RBP8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 AKR1C3P42330 323 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 CNN1P51911 297 aaKnown RBP8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 PSG9Q00887 426 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 ADIRFQ15847 76 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 SIGLEC15Q6ZMC9 328 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 LCNL1Q6ZST4 164 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 ARL6IP6Q8N6S5 226 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 UBE2E2Q96LR5 201 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 ATG101Q9BSB4 218 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 KLF12Q9Y4X4 402 aa8.51□□□□□ -1.05
CSNK1E-202ENST00000366216 SNRPCP09234 159 aaKnown RBP8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 LGALS1P09382 135 aaKnown RBP8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 GALR1P47211 349 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 MEOX2P50222 304 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 TMEM183BQ1AE95 376 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 RNF212Q495C1 297 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 GPHB5Q86YW7 130 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 C15orf54Q8N8G6 183 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 ISOC2Q96AB3 205 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 ANAPC16Q96DE5 110 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 C17orf77Q96MU5 243 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 SMAD5-AS1Q9Y6J3 95 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 DNAH10Q8IVF4 4471 aa8.5□□□□□ -1.05
CSNK1E-202ENST00000366216 IGHV3OR16-8A0A075B7F1 116 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 A0A1W2PS18 150 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 H3BTX0 84 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 K7EMT4 169 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 PPP1R2P9O14990 202 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 GHRHP01286 108 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 TCRAP04437 139 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 ATF4P18848 351 aaPredicted RBP8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 GNG4P50150 75 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 FAM106AQ4KMX7 169 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 CENPWQ5EE01 88 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 C16orf54Q6UWD8 224 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 UNQ9165/PRO28630Q6UXU0 137 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 C8orf86Q6ZUL3 223 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 OCC1Q8TAD7 63 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 CMTM2Q8TAZ6 248 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 SMIM12Q96EX1 92 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 IGF2BP2-AS1Q96M15 143 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 AAMDCQ9H7C9 122 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 ZMAT4Q9H898 229 aa8.49□□□□□ -1.05
CSNK1E-202ENST00000366216 KMT2AQ03164 3969 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 HECTD4Q9Y4D8 3996 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 TRBV6-1A0A0K0K1D8 114 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 SERTM2A0A1B0GWG4 89 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 COLCA2A8K830 154 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 SLC17A3O00476 420 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 APOHP02749 345 aaPredicted RBP8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 GNG5P63218 68 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 EXOC3-AS1Q8N2X6 119 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 GLMPQ8WWB7 406 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 GRAMD2BQ96HH9 432 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 FMC1Q96HJ9 113 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 YPEL4Q96NS1 127 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 DUX3Q96PT4 197 aa8.48□□□□□ -1.05
CSNK1E-202ENST00000366216 ZNF256Q9Y2P7 627 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms