RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TRAV8-2A0A0B4J237 113 aa15.48■□□□□ 0.07
SHISA4-201ENST00000362011 K7EQG2 157 aa15.48■□□□□ 0.07
SHISA4-201ENST00000362011 HLA-DMBP28068 263 aa15.48■□□□□ 0.07
SHISA4-201ENST00000362011 IGFL4Q6B9Z1 124 aa15.48■□□□□ 0.07
SHISA4-201ENST00000362011 WFDC9Q8NEX5 89 aa15.48■□□□□ 0.07
SHISA4-201ENST00000362011 CMTM2Q8TAZ6 248 aa15.48■□□□□ 0.07
SHISA4-201ENST00000362011 SPAG8Q99932 426 aaPredicted RBP15.48■□□□□ 0.07
SHISA4-201ENST00000362011 TCEAL7Q9BRU2 100 aa15.48■□□□□ 0.07
SHISA4-201ENST00000362011 SRP19P09132 144 aaKnown RBP15.47■□□□□ 0.07
SHISA4-201ENST00000362011 LCN12Q6JVE5 192 aa15.47■□□□□ 0.07
SHISA4-201ENST00000362011 MRPL53Q96EL3 112 aaKnown RBP15.47■□□□□ 0.07
SHISA4-201ENST00000362011 IZUMO1RA6ND01 250 aa15.46■□□□□ 0.07
SHISA4-201ENST00000362011 CSN1S1P47710 185 aa15.46■□□□□ 0.07
SHISA4-201ENST00000362011 PSG3Q16557 428 aa15.46■□□□□ 0.07
SHISA4-201ENST00000362011 RNF182Q8N6D2 247 aa15.46■□□□□ 0.07
SHISA4-201ENST00000362011 CITED4Q96RK1 184 aa15.46■□□□□ 0.07
SHISA4-201ENST00000362011 EPDR1Q9UM22 224 aa15.46■□□□□ 0.07
SHISA4-201ENST00000362011 RPH3ALQ9UNE2 315 aa15.46■□□□□ 0.07
SHISA4-201ENST00000362011 SCO2A0A1W2PP80 73 aa15.45■□□□□ 0.06
SHISA4-201ENST00000362011 OR4C46A6NHA9 309 aa15.45■□□□□ 0.06
SHISA4-201ENST00000362011 C9JQL5 133 aa15.45■□□□□ 0.06
SHISA4-201ENST00000362011 TMEM250H0YL14 139 aa15.45■□□□□ 0.06
SHISA4-201ENST00000362011 M0R3E3 92 aa15.45■□□□□ 0.06
SHISA4-201ENST00000362011 GNG5P63218 68 aa15.45■□□□□ 0.06
SHISA4-201ENST00000362011 GUCA2BQ16661 112 aa15.45■□□□□ 0.06
SHISA4-201ENST00000362011 ARL6IP6Q8N6S5 226 aa15.45■□□□□ 0.06
SHISA4-201ENST00000362011 HIST1H2BAQ96A08 127 aa15.45■□□□□ 0.06
SHISA4-201ENST00000362011 C11orf52Q96A22 123 aa15.45■□□□□ 0.06
SHISA4-201ENST00000362011 PEX7O00628 323 aa15.44■□□□□ 0.06
SHISA4-201ENST00000362011 SNRPD3P62318 126 aaKnown RBP15.44■□□□□ 0.06
SHISA4-201ENST00000362011 KPRPQ5T749 579 aaPredicted RBP15.44■□□□□ 0.06
SHISA4-201ENST00000362011 ZNF738Q8NE65 137 aa15.44■□□□□ 0.06
SHISA4-201ENST00000362011 C20orf173Q96LM9 149 aa15.44■□□□□ 0.06
SHISA4-201ENST00000362011 LINC00052Q96N35 136 aa15.44■□□□□ 0.06
SHISA4-201ENST00000362011 ATG101Q9BSB4 218 aa15.44■□□□□ 0.06
SHISA4-201ENST00000362011 SLC35B3Q9H1N7 401 aa15.44■□□□□ 0.06
SHISA4-201ENST00000362011 ZNF688P0C7X2 276 aa15.43■□□□□ 0.06
SHISA4-201ENST00000362011 CEBPGP53567 150 aa15.43■□□□□ 0.06
SHISA4-201ENST00000362011 BEAN1Q3B7T3 259 aa15.43■□□□□ 0.06
SHISA4-201ENST00000362011 FAM24BQ8N5W8 94 aa15.43■□□□□ 0.06
SHISA4-201ENST00000362011 CYB561D1Q8N8Q1 229 aa15.43■□□□□ 0.06
SHISA4-201ENST00000362011 GPR61Q9BZJ8 451 aa15.43■□□□□ 0.06
SHISA4-201ENST00000362011 DIRC3C9JPN6 131 aa15.43■□□□□ 0.06
SHISA4-201ENST00000362011 TCRAP04437 139 aa15.43■□□□□ 0.06
SHISA4-201ENST00000362011 IGLL1P15814 213 aa15.43■□□□□ 0.06
SHISA4-201ENST00000362011 AKR1C3P42330 323 aa15.43■□□□□ 0.06
SHISA4-201ENST00000362011 SERTM2A0A1B0GWG4 89 aa15.42■□□□□ 0.06
SHISA4-201ENST00000362011 ZNF705FA8MVS1 300 aaPredicted RBP15.42■□□□□ 0.06
SHISA4-201ENST00000362011 K7EQM0 130 aa15.42■□□□□ 0.06
SHISA4-201ENST00000362011 SFTA3P0C7M3 94 aa15.42■□□□□ 0.06
SHISA4-201ENST00000362011 GOLT1AQ6ZVE7 132 aa15.42■□□□□ 0.06
SHISA4-201ENST00000362011 RPUSD4Q96CM3 377 aaKnown RBP15.42■□□□□ 0.06
SHISA4-201ENST00000362011 ZNF256Q9Y2P7 627 aaPredicted RBP15.42■□□□□ 0.06
SHISA4-201ENST00000362011 SORL1Q92673 2214 aa15.41■□□□□ 0.06
SHISA4-201ENST00000362011 CNN1P51911 297 aaKnown RBP15.41■□□□□ 0.06
SHISA4-201ENST00000362011 PSMG4Q5JS54 123 aa15.41■□□□□ 0.06
SHISA4-201ENST00000362011 C2CD4CQ8TF44 421 aa15.41■□□□□ 0.06
SHISA4-201ENST00000362011 TMEM218A2RU14 115 aa15.4■□□□□ 0.06
SHISA4-201ENST00000362011 SAMD5Q5TGI4 173 aa15.4■□□□□ 0.06
SHISA4-201ENST00000362011 PARLQ9H300 379 aa15.4■□□□□ 0.06
SHISA4-201ENST00000362011 IGKV2-40A0A087WW87 121 aaPredicted RBP15.39■□□□□ 0.05
SHISA4-201ENST00000362011 IGKV2D-40P01614 121 aaPredicted RBP15.39■□□□□ 0.05
SHISA4-201ENST00000362011 PRB4P10163 310 aaPredicted RBP15.39■□□□□ 0.05
SHISA4-201ENST00000362011 MAP6D1Q9H9H5 199 aa15.39■□□□□ 0.05
SHISA4-201ENST00000362011 AGRNO00468 2067 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 RBAKDNA6NC62 111 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 PRAC2D3DTV9 90 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 G3V4G9 280 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 S100A9P06702 114 aaKnown RBP15.38■□□□□ 0.05
SHISA4-201ENST00000362011 CMC4P56277 68 aaPredicted RBP15.38■□□□□ 0.05
SHISA4-201ENST00000362011 DEFB131AP59861 70 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 UBE2G1P62253 170 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 ZNF674Q2M3X9 581 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 SOHLH1Q5JUK2 328 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 TMEM75Q8N9X5 138 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 FMC1Q96HJ9 113 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 DERL1Q9BUN8 251 aa15.38■□□□□ 0.05
SHISA4-201ENST00000362011 SMIM7Q9BQ49 75 aa15.37■□□□□ 0.05
SHISA4-201ENST00000362011 TRAV34A0A0B4J273 112 aa15.36■□□□□ 0.05
SHISA4-201ENST00000362011 ZNF727A8MUV8 499 aa15.36■□□□□ 0.05
SHISA4-201ENST00000362011 F8W036 122 aa15.36■□□□□ 0.05
SHISA4-201ENST00000362011 RPL35P42766 123 aaKnown RBP15.36■□□□□ 0.05
SHISA4-201ENST00000362011 TMEM183BQ1AE95 376 aa15.36■□□□□ 0.05
SHISA4-201ENST00000362011 FAM74A3Q4VXF1 159 aa15.36■□□□□ 0.05
SHISA4-201ENST00000362011 OR10J6PQ8NGY7 276 aa15.36■□□□□ 0.05
SHISA4-201ENST00000362011 LINC00479Q96M42 142 aa15.36■□□□□ 0.05
SHISA4-201ENST00000362011 KLF12Q9Y4X4 402 aa15.36■□□□□ 0.05
SHISA4-201ENST00000362011 FBLL1A6NHQ2 334 aaKnown RBP15.35■□□□□ 0.05
SHISA4-201ENST00000362011 TAS2R60P59551 318 aa15.35■□□□□ 0.05
SHISA4-201ENST00000362011 DEFB1P60022 68 aa15.35■□□□□ 0.05
SHISA4-201ENST00000362011 EBLN2Q6P2I7 272 aa15.35■□□□□ 0.05
SHISA4-201ENST00000362011 OR8A1Q8NGG7 326 aa15.35■□□□□ 0.05
SHISA4-201ENST00000362011 SEC11CQ9BY50 192 aa15.35■□□□□ 0.05
SHISA4-201ENST00000362011 TRAV8-1A0A0A6YYK1 113 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 TRBV6-1A0A0K0K1D8 114 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 OR11H12B2RN74 326 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 KRBOX1C9JBD0 128 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 F6UB75 175 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 ADCYAP1P18509 176 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 FLI1Q01543 452 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms