RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 TRAV8-2A0A0B4J237 113 aa13.6□□□□□ -0.23
CCDC7-203ENST00000362006 ADCYAP1P18509 176 aa13.6□□□□□ -0.23
CCDC7-203ENST00000362006 TSPAN4O14817 238 aa13.59□□□□□ -0.23
CCDC7-203ENST00000362006 TAS2R60P59551 318 aa13.59□□□□□ -0.23
CCDC7-203ENST00000362006 PSG3Q16557 428 aa13.59□□□□□ -0.23
CCDC7-203ENST00000362006 DCANP1Q8TF63 244 aa13.59□□□□□ -0.23
CCDC7-203ENST00000362006 NIPSNAP3BQ9BS92 247 aa13.59□□□□□ -0.23
CCDC7-203ENST00000362006 IGKV3-7A0A075B6H7 116 aa13.58□□□□□ -0.23
CCDC7-203ENST00000362006 DIRC3C9JPN6 131 aa13.58□□□□□ -0.23
CCDC7-203ENST00000362006 GNG5P63218 68 aa13.58□□□□□ -0.23
CCDC7-203ENST00000362006 ZNF674Q2M3X9 581 aa13.58□□□□□ -0.23
CCDC7-203ENST00000362006 LCN12Q6JVE5 192 aa13.58□□□□□ -0.23
CCDC7-203ENST00000362006 KLF12Q9Y4X4 402 aa13.58□□□□□ -0.23
CCDC7-203ENST00000362006 FBLL1A6NHQ2 334 aaKnown RBP13.58□□□□□ -0.24
CCDC7-203ENST00000362006 M0R3E3 92 aa13.58□□□□□ -0.24
CCDC7-203ENST00000362006 GBGT1Q8N5D6 347 aa13.58□□□□□ -0.24
CCDC7-203ENST00000362006 OR2K2Q8NGT1 345 aa13.58□□□□□ -0.24
CCDC7-203ENST00000362006 RPH3ALQ9UNE2 315 aa13.58□□□□□ -0.24
CCDC7-203ENST00000362006 K7EQG2 157 aa13.57□□□□□ -0.24
CCDC7-203ENST00000362006 SAP30O75446 220 aa13.57□□□□□ -0.24
CCDC7-203ENST00000362006 RPL35P42766 123 aaKnown RBP13.57□□□□□ -0.24
CCDC7-203ENST00000362006 TMEM183BQ1AE95 376 aa13.57□□□□□ -0.24
CCDC7-203ENST00000362006 TMEM241Q24JQ0 296 aa13.57□□□□□ -0.24
CCDC7-203ENST00000362006 FMC1Q96HJ9 113 aa13.57□□□□□ -0.24
CCDC7-203ENST00000362006 C9JCJ5 164 aa13.57□□□□□ -0.24
CCDC7-203ENST00000362006 APOC3P02656 99 aa13.57□□□□□ -0.24
CCDC7-203ENST00000362006 UBE2G1P62253 170 aa13.57□□□□□ -0.24
CCDC7-203ENST00000362006 SNRPD3P62318 126 aaKnown RBP13.57□□□□□ -0.24
CCDC7-203ENST00000362006 IGFL4Q6B9Z1 124 aa13.57□□□□□ -0.24
CCDC7-203ENST00000362006 NAT8Q9UHE5 227 aa13.57□□□□□ -0.24
CCDC7-203ENST00000362006 RBAKDNA6NC62 111 aa13.56□□□□□ -0.24
CCDC7-203ENST00000362006 CD300EQ496F6 205 aaPredicted RBP13.56□□□□□ -0.24
CCDC7-203ENST00000362006 GOLT1AQ6ZVE7 132 aa13.56□□□□□ -0.24
CCDC7-203ENST00000362006 WFDC3Q8IUB2 231 aa13.56□□□□□ -0.24
CCDC7-203ENST00000362006 TMEM61Q8N0U2 210 aa13.56□□□□□ -0.24
CCDC7-203ENST00000362006 SVBPQ8N300 66 aa13.56□□□□□ -0.24
CCDC7-203ENST00000362006 RNF182Q8N6D2 247 aa13.56□□□□□ -0.24
CCDC7-203ENST00000362006 SPAG8Q99932 426 aaPredicted RBP13.56□□□□□ -0.24
CCDC7-203ENST00000362006 DERL1Q9BUN8 251 aa13.56□□□□□ -0.24
CCDC7-203ENST00000362006 TRBV6-1A0A0K0K1D8 114 aa13.55□□□□□ -0.24
CCDC7-203ENST00000362006 HLA-DMBP28068 263 aa13.55□□□□□ -0.24
CCDC7-203ENST00000362006 INSL3P51460 131 aa13.55□□□□□ -0.24
CCDC7-203ENST00000362006 PNRC1Q12796 327 aaPredicted RBP13.55□□□□□ -0.24
CCDC7-203ENST00000362006 TMEM75Q8N9X5 138 aa13.55□□□□□ -0.24
CCDC7-203ENST00000362006 TVP23CQ96ET8 276 aa13.55□□□□□ -0.24
CCDC7-203ENST00000362006 SELENOKQ9Y6D0 94 aa13.55□□□□□ -0.24
CCDC7-203ENST00000362006 LY96Q9Y6Y9 160 aa13.55□□□□□ -0.24
CCDC7-203ENST00000362006 OR4C46A6NHA9 309 aa13.54□□□□□ -0.24
CCDC7-203ENST00000362006 IGLV1-51P01701 117 aa13.54□□□□□ -0.24
CCDC7-203ENST00000362006 GNG4P50150 75 aa13.54□□□□□ -0.24
CCDC7-203ENST00000362006 ZNF738Q8NE65 137 aa13.54□□□□□ -0.24
CCDC7-203ENST00000362006 MCRIP2Q9BUT9 160 aaKnown RBP13.54□□□□□ -0.24
CCDC7-203ENST00000362006 SDF2L1Q9HCN8 221 aa13.54□□□□□ -0.24
CCDC7-203ENST00000362006 ZNF705FA8MVS1 300 aaPredicted RBP13.54□□□□□ -0.24
CCDC7-203ENST00000362006 TFPI2P48307 235 aa13.54□□□□□ -0.24
CCDC7-203ENST00000362006 SMIM12Q96EX1 92 aa13.54□□□□□ -0.24
CCDC7-203ENST00000362006 TENM1Q9UKZ4 2725 aa13.53□□□□□ -0.24
CCDC7-203ENST00000362006 SNAPINO95295 136 aa13.53□□□□□ -0.24
CCDC7-203ENST00000362006 C20orf173Q96LM9 149 aa13.53□□□□□ -0.24
CCDC7-203ENST00000362006 LINC00479Q96M42 142 aa13.53□□□□□ -0.24
CCDC7-203ENST00000362006 TRAV34A0A0B4J273 112 aa13.52□□□□□ -0.24
CCDC7-203ENST00000362006 C9orf66Q5T8R8 295 aa13.52□□□□□ -0.24
CCDC7-203ENST00000362006 WFDC9Q8NEX5 89 aa13.52□□□□□ -0.24
CCDC7-203ENST00000362006 FLI1Q01543 452 aaPredicted RBP13.52□□□□□ -0.25
CCDC7-203ENST00000362006 GUCA2BQ16661 112 aa13.52□□□□□ -0.25
CCDC7-203ENST00000362006 CENPWQ5EE01 88 aa13.52□□□□□ -0.25
CCDC7-203ENST00000362006 BAGE2Q86Y30 109 aa13.52□□□□□ -0.25
CCDC7-203ENST00000362006 IGF2BP2-AS1Q96M15 143 aa13.52□□□□□ -0.25
CCDC7-203ENST00000362006 ZFP30Q9Y2G7 519 aa13.52□□□□□ -0.25
CCDC7-203ENST00000362006 CD33P20138 364 aa13.51□□□□□ -0.25
CCDC7-203ENST00000362006 PSG8Q9UQ74 426 aa13.51□□□□□ -0.25
CCDC7-203ENST00000362006 TRBV20OR9-2A0A075B6H5 130 aa13.51□□□□□ -0.25
CCDC7-203ENST00000362006 LTAP01374 205 aa13.51□□□□□ -0.25
CCDC7-203ENST00000362006 IGLV2-11P01706 119 aa13.51□□□□□ -0.25
CCDC7-203ENST00000362006 CMC4P56277 68 aaPredicted RBP13.51□□□□□ -0.25
CCDC7-203ENST00000362006 OR10J6PQ8NGY7 276 aa13.51□□□□□ -0.25
CCDC7-203ENST00000362006 IGKV2-40A0A087WW87 121 aaPredicted RBP13.5□□□□□ -0.25
CCDC7-203ENST00000362006 B4DEV8 164 aa13.5□□□□□ -0.25
CCDC7-203ENST00000362006 PRAC2D3DTV9 90 aa13.5□□□□□ -0.25
CCDC7-203ENST00000362006 IGKV2D-40P01614 121 aaPredicted RBP13.5□□□□□ -0.25
CCDC7-203ENST00000362006 ZNF688P0C7X2 276 aa13.5□□□□□ -0.25
CCDC7-203ENST00000362006 C9orf47Q6ZRZ4 202 aa13.5□□□□□ -0.25
CCDC7-203ENST00000362006 M0R036 132 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 RPL23P62829 140 aaKnown RBP13.49□□□□□ -0.25
CCDC7-203ENST00000362006 PSMG4Q5JS54 123 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 SAPCD1Q5SSQ6 148 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 PRNTQ86SH4 94 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 Q86TA4 180 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 LINC01551Q86U37 167 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 CLRN3Q8NCR9 226 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 OCC1Q8TAD7 63 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 LINC00477Q96M19 166 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 BIN3Q9NQY0 253 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 PPP1R14DQ9NXH3 145 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 FBN1P35555 2871 aaKnown RBP13.49□□□□□ -0.25
CCDC7-203ENST00000362006 TRAV8-1A0A0A6YYK1 113 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 TMEM78Q5T7P6 136 aa13.49□□□□□ -0.25
CCDC7-203ENST00000362006 ZNF256Q9Y2P7 627 aaPredicted RBP13.49□□□□□ -0.25
CCDC7-203ENST00000362006 ADIRFQ15847 76 aa13.48□□□□□ -0.25
CCDC7-203ENST00000362006 FAM24BQ8N5W8 94 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms