RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 CNN1P51911 297 aaKnown RBP14.07□□□□□ -0.16
HLA-DRB1-201ENST00000360004 FXYD7P58549 80 aa14.07□□□□□ -0.16
HLA-DRB1-201ENST00000360004 RANP62826 216 aaKnown RBP14.07□□□□□ -0.16
HLA-DRB1-201ENST00000360004 ICAM4Q14773 271 aa14.07□□□□□ -0.16
HLA-DRB1-201ENST00000360004 EXOC3-AS1Q8N2X6 119 aa14.07□□□□□ -0.16
HLA-DRB1-201ENST00000360004 OR8A1Q8NGG7 326 aa14.07□□□□□ -0.16
HLA-DRB1-201ENST00000360004 TGP01266 2768 aa14.07□□□□□ -0.16
HLA-DRB1-201ENST00000360004 CSN1S1P47710 185 aa14.06□□□□□ -0.16
HLA-DRB1-201ENST00000360004 CD300CQ08708 224 aa14.06□□□□□ -0.16
HLA-DRB1-201ENST00000360004 LGALSLQ3ZCW2 172 aaPredicted RBP14.06□□□□□ -0.16
HLA-DRB1-201ENST00000360004 FAM74A1Q5RGS3 127 aa14.06□□□□□ -0.16
HLA-DRB1-201ENST00000360004 EIF5AL1Q6IS14 154 aaKnown RBP14.06□□□□□ -0.16
HLA-DRB1-201ENST00000360004 BAP18Q8IXM2 172 aa14.06□□□□□ -0.16
HLA-DRB1-201ENST00000360004 PHYHIPLQ96FC7 376 aa14.06□□□□□ -0.16
HLA-DRB1-201ENST00000360004 XCL2Q9UBD3 114 aa14.06□□□□□ -0.16
HLA-DRB1-201ENST00000360004 TP53TG1Q9Y2A0 90 aa14.06□□□□□ -0.16
HLA-DRB1-201ENST00000360004 CTXND1A0A1B0GTU2 59 aa14.05□□□□□ -0.16
HLA-DRB1-201ENST00000360004 NDUFB4O95168 129 aa14.05□□□□□ -0.16
HLA-DRB1-201ENST00000360004 CXorf1O96002 111 aa14.05□□□□□ -0.16
HLA-DRB1-201ENST00000360004 SEC11BP0C7V7 166 aa14.05□□□□□ -0.16
HLA-DRB1-201ENST00000360004 STAG3L2P0CL84 134 aa14.05□□□□□ -0.16
HLA-DRB1-201ENST00000360004 STAG3L3P0CL85 134 aa14.05□□□□□ -0.16
HLA-DRB1-201ENST00000360004 RNF183Q96D59 192 aa14.05□□□□□ -0.16
HLA-DRB1-201ENST00000360004 MRPL53Q96EL3 112 aaKnown RBP14.05□□□□□ -0.16
HLA-DRB1-201ENST00000360004 ZNF503Q96F45 646 aa14.05□□□□□ -0.16
HLA-DRB1-201ENST00000360004 CMTM2Q8TAZ6 248 aa14.04□□□□□ -0.16
HLA-DRB1-201ENST00000360004 OVOL2Q9BRP0 275 aa14.04□□□□□ -0.16
HLA-DRB1-201ENST00000360004 Q9H3A6 140 aa14.04□□□□□ -0.16
HLA-DRB1-201ENST00000360004 TMEM167BQ9NRX6 74 aa14.04□□□□□ -0.16
HLA-DRB1-201ENST00000360004 UMAD1C9J7I0 102 aa14.03□□□□□ -0.16
HLA-DRB1-201ENST00000360004 M0R3E3 92 aa14.03□□□□□ -0.16
HLA-DRB1-201ENST00000360004 GCHFRP30047 84 aa14.03□□□□□ -0.16
HLA-DRB1-201ENST00000360004 LYPD1Q8N2G4 141 aa14.03□□□□□ -0.16
HLA-DRB1-201ENST00000360004 STOML3Q8TAV4 291 aa14.03□□□□□ -0.16
HLA-DRB1-201ENST00000360004 FAM213BQ8TBF2 198 aa14.03□□□□□ -0.16
HLA-DRB1-201ENST00000360004 TMED6Q8WW62 240 aa14.03□□□□□ -0.16
HLA-DRB1-201ENST00000360004 CLUHP3Q96NS8 147 aa14.03□□□□□ -0.16
HLA-DRB1-201ENST00000360004 RARRES2Q99969 163 aa14.03□□□□□ -0.16
HLA-DRB1-201ENST00000360004 SLC35B3Q9H1N7 401 aa14.03□□□□□ -0.16
HLA-DRB1-201ENST00000360004 MAP1LC3B2A6NCE7 125 aa14.02□□□□□ -0.17
HLA-DRB1-201ENST00000360004 PRAC2D3DTV9 90 aa14.02□□□□□ -0.17
HLA-DRB1-201ENST00000360004 AMBPP02760 352 aa14.02□□□□□ -0.17
HLA-DRB1-201ENST00000360004 SLC51BQ86UW2 128 aa14.02□□□□□ -0.17
HLA-DRB1-201ENST00000360004 OR11H2Q8NH07 326 aa14.02□□□□□ -0.17
HLA-DRB1-201ENST00000360004 MAP1LC3BQ9GZQ8 125 aa14.02□□□□□ -0.17
HLA-DRB1-201ENST00000360004 RPH3ALQ9UNE2 315 aa14.02□□□□□ -0.17
HLA-DRB1-201ENST00000360004 IGHV3OR16-12A0A075B7B8 117 aa14.01□□□□□ -0.17
HLA-DRB1-201ENST00000360004 BOLA2-SMG1P6H3BVE0 249 aa14.01□□□□□ -0.17
HLA-DRB1-201ENST00000360004 SPINK13Q1W4C9 94 aa14.01□□□□□ -0.17
HLA-DRB1-201ENST00000360004 C9orf62Q8N4C0 152 aa14.01□□□□□ -0.17
HLA-DRB1-201ENST00000360004 TMEM208Q9BTX3 173 aa14.01□□□□□ -0.17
HLA-DRB1-201ENST00000360004 OTORQ9NRC9 128 aa14.01□□□□□ -0.17
HLA-DRB1-201ENST00000360004 AGRNO00468 2067 aa14.01□□□□□ -0.17
HLA-DRB1-201ENST00000360004 PGPA6NDG6 321 aa14□□□□□ -0.17
HLA-DRB1-201ENST00000360004 M0R2Z0 102 aa14□□□□□ -0.17
HLA-DRB1-201ENST00000360004 TSPOP30536 169 aa14□□□□□ -0.17
HLA-DRB1-201ENST00000360004 FGF8P55075 233 aaPredicted RBP14□□□□□ -0.17
HLA-DRB1-201ENST00000360004 SSX7Q7RTT5 188 aa14□□□□□ -0.17
HLA-DRB1-201ENST00000360004 RXFP4Q8TDU9 374 aa14□□□□□ -0.17
HLA-DRB1-201ENST00000360004 GOLT1BQ9Y3E0 138 aa14□□□□□ -0.17
HLA-DRB1-201ENST00000360004 INSP01308 110 aa13.99□□□□□ -0.17
HLA-DRB1-201ENST00000360004 ZNF726P1Q15940 193 aa13.99□□□□□ -0.17
HLA-DRB1-201ENST00000360004 TMEM78Q5T7P6 136 aa13.99□□□□□ -0.17
HLA-DRB1-201ENST00000360004 DPPA3Q6W0C5 159 aa13.99□□□□□ -0.17
HLA-DRB1-201ENST00000360004 WWC2-AS2Q96NR7 200 aa13.99□□□□□ -0.17
HLA-DRB1-201ENST00000360004 IGKV2-40A0A087WW87 121 aaPredicted RBP13.98□□□□□ -0.17
HLA-DRB1-201ENST00000360004 IGKV2D-40P01614 121 aaPredicted RBP13.98□□□□□ -0.17
HLA-DRB1-201ENST00000360004 SLC25A5P05141 298 aaKnown RBP13.98□□□□□ -0.17
HLA-DRB1-201ENST00000360004 GIG44P09565 113 aaPredicted RBP13.98□□□□□ -0.17
HLA-DRB1-201ENST00000360004 LEPP41159 167 aa13.98□□□□□ -0.17
HLA-DRB1-201ENST00000360004 NKX2-5P52952 324 aaPredicted RBP13.98□□□□□ -0.17
HLA-DRB1-201ENST00000360004 SFT2D1Q8WV19 159 aa13.98□□□□□ -0.17
HLA-DRB1-201ENST00000360004 NBEAL2Q6ZNJ1 2754 aa13.98□□□□□ -0.17
HLA-DRB1-201ENST00000360004 A0A1B0GV50 99 aa13.97□□□□□ -0.17
HLA-DRB1-201ENST00000360004 NPIPB6E9PJ23 425 aa13.97□□□□□ -0.17
HLA-DRB1-201ENST00000360004 J3KRW8 73 aa13.97□□□□□ -0.17
HLA-DRB1-201ENST00000360004 FHITP49789 147 aa13.97□□□□□ -0.17
HLA-DRB1-201ENST00000360004 ERCC8Q13216 396 aa13.97□□□□□ -0.17
HLA-DRB1-201ENST00000360004 AMTNQ6UX39 209 aa13.97□□□□□ -0.17
HLA-DRB1-201ENST00000360004 IGF2BP2-AS1Q96M15 143 aa13.97□□□□□ -0.17
HLA-DRB1-201ENST00000360004 TRAV12-2A0A075B6T6 113 aa13.96□□□□□ -0.17
HLA-DRB1-201ENST00000360004 A8MTW9 85 aa13.96□□□□□ -0.17
HLA-DRB1-201ENST00000360004 CDKN1BP46527 198 aa13.96□□□□□ -0.17
HLA-DRB1-201ENST00000360004 RAB5CP51148 216 aa13.96□□□□□ -0.17
HLA-DRB1-201ENST00000360004 UBE2G2P60604 165 aa13.96□□□□□ -0.17
HLA-DRB1-201ENST00000360004 LINC00477Q96M19 166 aa13.96□□□□□ -0.17
HLA-DRB1-201ENST00000360004 TMPRSS5Q9H3S3 457 aa13.96□□□□□ -0.17
HLA-DRB1-201ENST00000360004 COL7A1Q02388 2944 aa13.96□□□□□ -0.18
HLA-DRB1-201ENST00000360004 TEX46H3BTG2 121 aa13.95□□□□□ -0.18
HLA-DRB1-201ENST00000360004 K7EQM0 130 aa13.95□□□□□ -0.18
HLA-DRB1-201ENST00000360004 H2AFB1P0C5Y9 115 aa13.95□□□□□ -0.18
HLA-DRB1-201ENST00000360004 A0A0J9YWU9 116 aa13.94□□□□□ -0.18
HLA-DRB1-201ENST00000360004 DIRC3C9JPN6 131 aa13.94□□□□□ -0.18
HLA-DRB1-201ENST00000360004 IFNA7P01567 189 aa13.94□□□□□ -0.18
HLA-DRB1-201ENST00000360004 MIFP14174 115 aa13.94□□□□□ -0.18
HLA-DRB1-201ENST00000360004 CSNK1G2-AS1Q8NCQ2 148 aa13.94□□□□□ -0.18
HLA-DRB1-201ENST00000360004 CT45A10P0DMU9 189 aa13.93□□□□□ -0.18
HLA-DRB1-201ENST00000360004 SUMO1P63165 101 aaKnown RBP13.93□□□□□ -0.18
HLA-DRB1-201ENST00000360004 C9orf47Q6ZRZ4 202 aa13.93□□□□□ -0.18
HLA-DRB1-201ENST00000360004 GOLT1AQ6ZVE7 132 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms