RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 FAM27E3Q08E93 113 aa7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 MORN3Q6PF18 240 aaPredicted RBP7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 FAM19A5Q7Z5A7 132 aaPredicted RBP7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 PRR7Q8TB68 274 aa7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 PGLYRP4Q96LB8 373 aa7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 HRNRQ86YZ3 2850 aaPredicted RBP7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 GFRALQ6UXV0 394 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 LINC00322Q6ZN03 302 aaPredicted RBP7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 TEN1Q86WV5 123 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 TMEM126AQ9H061 195 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 FBXL15Q9H469 300 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 MDFICQ9P1T7 246 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 FAM215AQ9Y5M1 114 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 SOX21Q9Y651 276 aaPredicted RBP7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 ABCA12Q86UK0 2595 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 CELSR1Q9NYQ6 3014 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 TFF1P04155 84 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 UBTD1Q9HAC8 227 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 TMSB15BA0A087X1C1 80 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 CA6P23280 308 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 COL8A1P27658 744 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 SLC25A33Q9BSK2 321 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 TPPP3Q9BW30 176 aa7.41□□□□□ -1.22
SMARCAL1-202ENST00000358207 PDZD2O15018 2839 aa7.4□□□□□ -1.22
SMARCAL1-202ENST00000358207 MOSP00540 346 aa7.4□□□□□ -1.22
SMARCAL1-202ENST00000358207 LINC00205P59089 165 aa7.4□□□□□ -1.22
SMARCAL1-202ENST00000358207 PRDM14Q9GZV8 571 aa7.4□□□□□ -1.22
SMARCAL1-202ENST00000358207 PCBD1P61457 104 aa7.4□□□□□ -1.23
SMARCAL1-202ENST00000358207 CITED2Q99967 270 aaPredicted RBP7.4□□□□□ -1.23
SMARCAL1-202ENST00000358207 NBPF19A0A087WUL8 3843 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 TRGV8A0A0C4DH27 118 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 C17orf98A8MV24 154 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 KRTAP27-1Q3LI81 207 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM53AQ6NSI3 398 aaPredicted RBP7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 PPP1R27Q86WC6 154 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 SIGLEC9Q9Y336 463 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 SNCGO76070 127 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 IFI27P40305 119 aaPredicted RBP7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 SFTA2Q6UW10 78 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 ZFP2Q6ZN57 461 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 ZNF414Q96IQ9 312 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 SGK494Q96LW2 274 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 RASL11BQ9BPW5 248 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 FGF23Q9GZV9 251 aaPredicted RBP7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 TMEM167BQ9NRX6 74 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 C21orf62Q9NYP8 219 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 HHLA3Q9XRX5 114 aa7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 TET2Q6N021 2002 aaPredicted RBP7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 USP9YO00507 2555 aaPredicted RBP7.39□□□□□ -1.23
SMARCAL1-202ENST00000358207 CELSR2Q9HCU4 2923 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 ZNF474Q6S9Z5 364 aaPredicted RBP7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 SLC25A10Q9UBX3 287 aaPredicted RBP7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 PROCRQ9UNN8 238 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 UNC79Q9P2D8 2635 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 M0R1B8 84 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 OVOL3O00110 214 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 GRPP07492 148 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 COX6B1P14854 86 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 PRR20EP86478 221 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 PRR20CP86479 221 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 PRR20DP86480 221 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 PRR20BP86481 221 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 PRR20AP86496 221 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 SPRNQ5BIV9 151 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 WFDC3Q8IUB2 231 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 ZCCHC24Q8N2G6 241 aaKnown RBP7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 MAPKAPK5-AS1Q8N8E1 139 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 DLX4Q92988 240 aaPredicted RBP7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 ARFGEF3Q5TH69 2177 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A10PA6NDY2 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A20PA6NIJ5 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A7PA6NKC0 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A22PA8MWA6 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A12PA8MX19 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A5PA8MXJ8 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A23PA8MXZ1 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 TMEM262E9PQX1 116 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A15PP0C7V4 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A13PP0C7W8 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A14PP0C7W9 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM90A24PP0C7X0 464 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 PSMB2P49721 201 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 MFAP4P55083 255 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 Q6Q795 121 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 PRSS3P2Q8NHM4 247 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 FOXC2Q99958 501 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 MRPL32Q9BYC8 188 aaKnown RBP7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 PLEKHA3Q9HB20 300 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 OBP2BQ9NPH6 170 aa7.38□□□□□ -1.23
SMARCAL1-202ENST00000358207 TRAV24A0A0B4J272 114 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 WI2-2373I1.2A0A1W2PRP0 233 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 FGF12P61328 243 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 ZNF826PQ6ZT77 177 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 Q6ZT83 130 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 CIARTQ8N365 385 aaPredicted RBP7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 ANKRD29Q8N6D5 301 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 RITA1Q96K30 269 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 CCL21O00585 134 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 SS18L1O75177 396 aaPredicted RBP7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 NDUFS7O75251 213 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms