RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
FXR1-202ENST00000357559 J3QW42 95 aa8.59□□□□□ -1.04
FXR1-202ENST00000357559 WISP3O95389 354 aaPredicted RBP8.59□□□□□ -1.04
FXR1-202ENST00000357559 EFNA4P52798 201 aa8.59□□□□□ -1.04
FXR1-202ENST00000357559 ZC2HC1BQ5TFG8 222 aa8.59□□□□□ -1.04
FXR1-202ENST00000357559 RPRMLQ8N4K4 120 aa8.59□□□□□ -1.04
FXR1-202ENST00000357559 SMPXQ9UHP9 88 aa8.59□□□□□ -1.04
FXR1-202ENST00000357559 A0A1W2PPI3 338 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 DSCR9P59020 149 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 HEPN1Q6WQI6 88 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 UBL5Q9BZL1 73 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 RLFQ13129 1914 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 TNFSF13O75888 250 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
FXR1-202ENST00000357559 ZNRF2Q8NHG8 242 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 EFNA2O43921 213 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 XCL1P47992 114 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 ZNF362Q5T0B9 420 aaPredicted RBP8.58□□□□□ -1.04
FXR1-202ENST00000357559 SLC25A48Q6ZT89 311 aaKnown RBP8.58□□□□□ -1.04
FXR1-202ENST00000357559 CD177Q8N6Q3 437 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 INAFM2P0DMQ5 153 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 TMEM213A2RRL7 107 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 SVIPQ8NHG7 77 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 AGMATQ9BSE5 352 aa8.58□□□□□ -1.04
FXR1-202ENST00000357559 E9PLN8 166 aa8.57□□□□□ -1.04
FXR1-202ENST00000357559 SPATA25Q9BR10 227 aa8.57□□□□□ -1.04
FXR1-202ENST00000357559 H0YJW9 148 aa8.57□□□□□ -1.04
FXR1-202ENST00000357559 RNASE2P10153 161 aaKnown RBP8.57□□□□□ -1.04
FXR1-202ENST00000357559 TRPT1Q86TN4 253 aaKnown RBP8.57□□□□□ -1.04
FXR1-202ENST00000357559 UBE2CO00762 179 aa8.57□□□□□ -1.04
FXR1-202ENST00000357559 ARMS2P0C7Q2 107 aa8.57□□□□□ -1.04
FXR1-202ENST00000357559 A0A1B0GWJ7 208 aa8.57□□□□□ -1.04
FXR1-202ENST00000357559 FAM223BA6NKX1 122 aa8.57□□□□□ -1.04
FXR1-202ENST00000357559 FAM223AQ8IWN6 122 aa8.57□□□□□ -1.04
FXR1-202ENST00000357559 HIST3H2BBQ8N257 126 aa8.57□□□□□ -1.04
FXR1-202ENST00000357559 IGKV1-9A0A0C4DH69 117 aa8.56□□□□□ -1.04
FXR1-202ENST00000357559 C5orf64Q2M2E5 130 aa8.56□□□□□ -1.04
FXR1-202ENST00000357559 FBLIM1Q8WUP2 373 aa8.56□□□□□ -1.04
FXR1-202ENST00000357559 A0A1B0GTI1 187 aa8.56□□□□□ -1.04
FXR1-202ENST00000357559 SLC25A16P16260 332 aa8.56□□□□□ -1.04
FXR1-202ENST00000357559 ZNF124Q15973 351 aa8.56□□□□□ -1.04
FXR1-202ENST00000357559 C14orf132Q9NPU4 83 aa8.56□□□□□ -1.04
FXR1-202ENST00000357559 LINC01619G3V211 115 aa8.56□□□□□ -1.04
FXR1-202ENST00000357559 FGF6P10767 208 aa8.56□□□□□ -1.04
FXR1-202ENST00000357559 WFDC9Q8NEX5 89 aa8.56□□□□□ -1.04
FXR1-202ENST00000357559 IGFBP3P17936 291 aaPredicted RBP8.55□□□□□ -1.04
FXR1-202ENST00000357559 TRGV9Q99603 122 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 DAZ1Q9NQZ3 744 aaKnown RBP8.55□□□□□ -1.04
FXR1-202ENST00000357559 I3L3M4 83 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 UBE2E1P51965 193 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 CACNA1EQ15878 2313 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 SHISA9B4DS77 424 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 C3orf79P0CE67 100 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 NTF4P34130 210 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 DSCAML1Q8TD84 2053 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 SP5Q6BEB4 398 aaPredicted RBP8.55□□□□□ -1.04
FXR1-202ENST00000357559 EP300Q09472 2414 aaPredicted RBP8.55□□□□□ -1.04
FXR1-202ENST00000357559 A0A1B0GUS0 222 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 HLA-DRB4P13762 266 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 USMG5Q96IX5 58 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 HLA-DRB4X5D2U9 266 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 K7ERJ3 54 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 APOC4P55056 127 aa8.55□□□□□ -1.04
FXR1-202ENST00000357559 IFITM1P13164 125 aa8.54□□□□□ -1.04
FXR1-202ENST00000357559 C9orf139Q6ZV77 190 aa8.54□□□□□ -1.04
FXR1-202ENST00000357559 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
FXR1-202ENST00000357559 LINC00271P0C7V0 271 aa8.54□□□□□ -1.04
FXR1-202ENST00000357559 RPP25LQ8N5L8 163 aaKnown RBP8.54□□□□□ -1.04
FXR1-202ENST00000357559 LAIR2Q6ISS4 152 aa8.54□□□□□ -1.04
FXR1-202ENST00000357559 SIGLEC9Q9Y336 463 aa8.54□□□□□ -1.04
FXR1-202ENST00000357559 H0YIZ8 118 aa8.54□□□□□ -1.04
FXR1-202ENST00000357559 CFHR1Q03591 330 aa8.54□□□□□ -1.04
FXR1-202ENST00000357559 IGLV3-21P80748 117 aaPredicted RBP8.54□□□□□ -1.04
FXR1-202ENST00000357559 LINC00473A8K010 186 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 ATP6V0E1O15342 81 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 IGKV1-27A0A075B6S5 117 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 FAM231BA6NCW3 169 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 E9PQ18 207 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 C8orf31Q8N9H6 132 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 GAFA1Q96PS6 74 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 ZNF581Q9P0T4 197 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 IGKV1-16P04430 117 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 MINOS1Q5TGZ0 78 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 C15orf53Q8NAA6 179 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 MINOS1-NBL1R4GNA1 71 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 PCNX1Q96RV3 2341 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 LINC01551Q86U37 167 aa8.53□□□□□ -1.04
FXR1-202ENST00000357559 NOP10Q9NPE3 64 aaKnown RBP8.53□□□□□ -1.04
FXR1-202ENST00000357559 TEX48A0A1B0GUV7 120 aa8.52□□□□□ -1.04
FXR1-202ENST00000357559 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.52□□□□□ -1.04
FXR1-202ENST00000357559 PRR30Q53SZ7 412 aaPredicted RBP8.52□□□□□ -1.04
FXR1-202ENST00000357559 TEX36Q5VZQ5 186 aa8.52□□□□□ -1.04
FXR1-202ENST00000357559 C20orf204Q6ZNR8 217 aa8.52□□□□□ -1.04
FXR1-202ENST00000357559 TSSC4Q9Y5U2 329 aaPredicted RBP8.52□□□□□ -1.04
FXR1-202ENST00000357559 G3V318 75 aa8.52□□□□□ -1.05
FXR1-202ENST00000357559 UNQ6494/PRO21346Q6UXR6 183 aa8.52□□□□□ -1.05
FXR1-202ENST00000357559 FRMPD3Q5JV73 1810 aa8.52□□□□□ -1.05
FXR1-202ENST00000357559 IGKV1-12A0A0C4DH73 117 aa8.52□□□□□ -1.05
FXR1-202ENST00000357559 IGKV1D-12P01611 117 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms