RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 SAT2Q96F10 170 aaPredicted RBP3□□□□□ -1.93
LIG4-201ENST00000356922 OR4C46A6NHA9 309 aa3□□□□□ -1.93
LIG4-201ENST00000356922 PRAC2D3DTV9 90 aa3□□□□□ -1.93
LIG4-201ENST00000356922 SOCS3O14543 225 aa3□□□□□ -1.93
LIG4-201ENST00000356922 WIPF1O43516 503 aa3□□□□□ -1.93
LIG4-201ENST00000356922 RPL7P18124 248 aaKnown RBP3□□□□□ -1.93
LIG4-201ENST00000356922 TAS2R60P59551 318 aa3□□□□□ -1.93
LIG4-201ENST00000356922 RAB5BP61020 215 aa3□□□□□ -1.93
LIG4-201ENST00000356922 CST9LP1Q5W188 147 aa3□□□□□ -1.93
LIG4-201ENST00000356922 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3□□□□□ -1.93
LIG4-201ENST00000356922 FXYD5Q96DB9 178 aa3□□□□□ -1.93
LIG4-201ENST00000356922 PSMG3Q9BT73 122 aaPredicted RBP3□□□□□ -1.93
LIG4-201ENST00000356922 ACTR3CQ9C0K3 210 aaPredicted RBP3□□□□□ -1.93
LIG4-201ENST00000356922 AAMDCQ9H7C9 122 aa3□□□□□ -1.93
LIG4-201ENST00000356922 SIGLEC8Q9NYZ4 499 aa3□□□□□ -1.93
LIG4-201ENST00000356922 DNAH7Q8WXX0 4024 aa3□□□□□ -1.93
LIG4-201ENST00000356922 M0R3E3 92 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 IGKV3-20P01619 116 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 CSN1S1P47710 185 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 ODF3L2Q3SX64 289 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 SIGLEC15Q6ZMC9 328 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 EXOC3-AS1Q8N2X6 119 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 OR4B1Q8NGF8 309 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 MRAPQ8TCY5 172 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 FUT9Q9Y231 359 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 ZNF705EA8MWA4 302 aaPredicted RBP2.99□□□□□ -1.93
LIG4-201ENST00000356922 SEC11BP0C7V7 166 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 ARL14EPLP0DKL9 152 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 CDC34P49427 236 aaPredicted RBP2.99□□□□□ -1.93
LIG4-201ENST00000356922 UBE2L3P68036 154 aaKnown RBP2.99□□□□□ -1.93
LIG4-201ENST00000356922 SERF2P84101 59 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 EGFEM1PQ0D2K5 195 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 BEAN1Q3B7T3 259 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 ZNF688P0C7X2 276 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 INSL3P51460 131 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 RANP62826 216 aaKnown RBP2.99□□□□□ -1.93
LIG4-201ENST00000356922 SAPCD1Q5SSQ6 148 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 EBLN2Q6P2I7 272 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 Q6ZQT7 251 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 DEFB125Q8N687 156 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 PHYHIPLQ96FC7 376 aa2.99□□□□□ -1.93
LIG4-201ENST00000356922 J3KRW8 73 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 K7EQG2 157 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 H2AFB1P0C5Y9 115 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 STAG3L2P0CL84 134 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 STAG3L3P0CL85 134 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 CD81P60033 236 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 UBE2G2P60604 165 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 KIR3DS1Q14943 382 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 LBHQ53QV2 105 aaPredicted RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 TMEM41BQ5BJD5 291 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 PSMG4Q5JS54 123 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 ZNF738Q8NE65 137 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 C2CD4CQ8TF44 421 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 LINC00479Q96M42 142 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 TMEM208Q9BTX3 173 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 PAXXQ9BUH6 204 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 NKX6-2Q9C056 277 aaPredicted RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 STARD9Q9P2P6 4700 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 OR11H12B2RN74 326 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 K7EIL1 84 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 CD5P06127 495 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 HTN1P15515 57 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 SULT1A2P50226 295 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 RNF141Q8WVD5 230 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 SGK494Q96LW2 274 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 HRH4Q9H3N8 390 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 NRN1Q9NPD7 142 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 YTHDF2Q9Y5A9 579 aaKnown RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 TRBV19A0A075B6N1 114 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 IGHV3OR16-12A0A075B7B8 117 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 KNCNA6PVL3 124 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 C1orf196B1AJZ1 125 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 PRM2P04554 102 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 NBEAP1P0C6P0 100 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 SRSF3P84103 164 aaKnown RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 KHDC3LQ587J8 217 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 STHQ8IWL8 128 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 EIF5A2Q9GZV4 153 aaKnown RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 ZNF331Q9NQX6 463 aaPredicted RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 PLECQ15149 4684 aaKnown RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 RBMY1BA6NDE4 496 aaKnown RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 RBMY1EA6NEQ0 496 aaKnown RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 GGTLC3B5MD39 225 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 IFNA1P01562 189 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 RBMY1DP0C7P1 496 aaKnown RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 RPL35AP18077 110 aaKnown RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 DEFB131AP59861 70 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 C1orf194Q5T5A4 169 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 KPRPQ5T749 579 aaPredicted RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 RARRES2Q99969 163 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 MAP6D1Q9H9H5 199 aa2.98□□□□□ -1.93
LIG4-201ENST00000356922 AURKAIP1Q9NWT8 199 aaPredicted RBP2.98□□□□□ -1.93
LIG4-201ENST00000356922 MAP1LC3B2A6NCE7 125 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 UMAD1C9J7I0 102 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 C9JQL5 133 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 K7EQM0 130 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 SLC25A5P05141 298 aaKnown RBP2.97□□□□□ -1.93
LIG4-201ENST00000356922 NMBP08949 121 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 GIG44P09565 113 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms