RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 IGFL2Q6UWQ7 119 aa7.98□□□□□ -1.13
PTPRA-203ENST00000356147 SCNM1Q9BWG6 230 aa7.98□□□□□ -1.13
PTPRA-203ENST00000356147 SPCS1Q9Y6A9 102 aa7.98□□□□□ -1.13
PTPRA-203ENST00000356147 SMAD7O15105 426 aaKnown RBP7.97□□□□□ -1.13
PTPRA-203ENST00000356147 APOBEC3AP31941 199 aaPredicted RBP7.97□□□□□ -1.13
PTPRA-203ENST00000356147 DLX6P56179 175 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 SEC11AP67812 179 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 TMEM155Q4W5P6 130 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 UFSP1Q6NVU6 142 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 MTURNQ8N3F0 131 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 DEFB123Q8N688 67 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 OR1N2Q8NGR9 330 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 IFI27L1Q96BM0 104 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 TMEM238C9JI98 176 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 TMEM30BQ3MIR4 351 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 FAM104BQ5XKR9 115 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 C16orf54Q6UWD8 224 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 GTF2H5Q6ZYL4 71 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 ORMDL3Q8N138 153 aa7.97□□□□□ -1.13
PTPRA-203ENST00000356147 TLN1Q9Y490 2541 aaKnown RBP7.97□□□□□ -1.13
PTPRA-203ENST00000356147 A6NDN8 102 aa7.96□□□□□ -1.13
PTPRA-203ENST00000356147 K7EIM0 57 aa7.96□□□□□ -1.13
PTPRA-203ENST00000356147 LY6HO94772 140 aa7.96□□□□□ -1.13
PTPRA-203ENST00000356147 EGR2P11161 476 aaPredicted RBP7.96□□□□□ -1.13
PTPRA-203ENST00000356147 ZNF80P51504 273 aaPredicted RBP7.96□□□□□ -1.13
PTPRA-203ENST00000356147 FXYD2P54710 66 aa7.96□□□□□ -1.13
PTPRA-203ENST00000356147 BOD1L2Q8IYS8 172 aa7.96□□□□□ -1.13
PTPRA-203ENST00000356147 ZNF491Q8N8L2 437 aa7.96□□□□□ -1.13
PTPRA-203ENST00000356147 RPEQ96AT9 228 aa7.96□□□□□ -1.13
PTPRA-203ENST00000356147 RNF125Q96EQ8 232 aa7.96□□□□□ -1.13
PTPRA-203ENST00000356147 SHANK2-AS3Q9BTD1 123 aa7.96□□□□□ -1.13
PTPRA-203ENST00000356147 CEP295Q9C0D2 2601 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 K7EQM0 130 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 PLP1P60201 277 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 H3BRM9 83 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 K7EP34 96 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 NDUFS7O75251 213 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 HBDP02042 147 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 THBDP07204 575 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 CRYGBP07316 175 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 FTH1P19P0C7X4 201 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 ADAMTSL5Q6ZMM2 481 aa7.96□□□□□ -1.14
PTPRA-203ENST00000356147 IGHV3OR16-13A0A075B7E8 117 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 IGHV3-74A0A0B4J1X5 117 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 HOXB4P17483 251 aaPredicted RBP7.95□□□□□ -1.14
PTPRA-203ENST00000356147 GTSCR1Q86UQ5 136 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 LINC00311Q8N616 119 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 VGLL1Q99990 258 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 A0A0G2JNJ9 132 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 C16orf97H3BN30 126 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 TIMM23O14925 209 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 ORM1P02763 201 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 TMEM11P17152 192 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 RPS20P60866 119 aaKnown RBP7.95□□□□□ -1.14
PTPRA-203ENST00000356147 RBPJQ06330 500 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 HES1Q14469 280 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 RNASE6Q93091 150 aaKnown RBP7.95□□□□□ -1.14
PTPRA-203ENST00000356147 ABHD17AQ96GS6 310 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 TMEM14CQ9P0S9 112 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 Q9UFV3 132 aa7.95□□□□□ -1.14
PTPRA-203ENST00000356147 IGHV3-66A0A0C4DH42 116 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 H3BRN7 92 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 BUB1B-PAK6H3BSN5 160 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 M0R296 226 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 GNG7O60262 68 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 PRSS1P07477 247 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 PAX2Q02962 417 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 HSD52Q0P140 79 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 A0A1W2PPM0 123 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 LGALS9BQ3B8N2 356 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 LGALS9CQ6DKI2 356 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 AAMDCQ9H7C9 122 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 ONECUT1Q9UBC0 465 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 AGRNO00468 2067 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 G3V4G9 280 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 LEPP41159 167 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 ERCC8Q13216 396 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 LCNL1Q6ZST4 164 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 JKAMPQ9P055 326 aa7.94□□□□□ -1.14
PTPRA-203ENST00000356147 ZFHX3Q15911 3703 aa7.93□□□□□ -1.14
PTPRA-203ENST00000356147 TEX48A0A1B0GUV7 120 aa7.93□□□□□ -1.14
PTPRA-203ENST00000356147 IGLV1-47P01700 117 aa7.93□□□□□ -1.14
PTPRA-203ENST00000356147 KLRD1Q13241 179 aa7.93□□□□□ -1.14
PTPRA-203ENST00000356147 GFRALQ6UXV0 394 aa7.93□□□□□ -1.14
PTPRA-203ENST00000356147 NUP37Q8NFH4 326 aa7.93□□□□□ -1.14
PTPRA-203ENST00000356147 NHP2Q9NX24 153 aaKnown RBP7.93□□□□□ -1.14
PTPRA-203ENST00000356147 RALYQ9UKM9 306 aaKnown RBP7.93□□□□□ -1.14
PTPRA-203ENST00000356147 MAP1AP78559 2803 aaPredicted RBP7.93□□□□□ -1.14
PTPRA-203ENST00000356147 ANKHD1Q8IWZ3 2542 aaKnown RBP7.93□□□□□ -1.14
PTPRA-203ENST00000356147 MRPS12O15235 138 aaKnown RBP7.93□□□□□ -1.14
PTPRA-203ENST00000356147 SAMD5Q5TGI4 173 aa7.93□□□□□ -1.14
PTPRA-203ENST00000356147 PVRIGQ6DKI7 326 aa7.93□□□□□ -1.14
PTPRA-203ENST00000356147 NPFFR1Q9GZQ6 430 aa7.93□□□□□ -1.14
PTPRA-203ENST00000356147 IGHV3-49A0A0A0MS15 119 aa7.92□□□□□ -1.14
PTPRA-203ENST00000356147 WI2-2373I1.2A0A1W2PRP0 233 aa7.92□□□□□ -1.14
PTPRA-203ENST00000356147 E7EQL1 145 aa7.92□□□□□ -1.14
PTPRA-203ENST00000356147 TNFRSF13BO14836 293 aaPredicted RBP7.92□□□□□ -1.14
PTPRA-203ENST00000356147 SPRY2O43597 315 aa7.92□□□□□ -1.14
PTPRA-203ENST00000356147 FOXC2Q99958 501 aa7.92□□□□□ -1.14
PTPRA-203ENST00000356147 GTSF1LQ9H1H1 148 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms