RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 LEPP41159 167 aa12.43□□□□□ -0.42
RTN3-205ENST00000356000 RPS19BP1Q86WX3 136 aaKnown RBP12.43□□□□□ -0.42
RTN3-205ENST00000356000 TRBV6-1A0A0K0K1D8 114 aa12.43□□□□□ -0.42
RTN3-205ENST00000356000 TMEM213A2RRL7 107 aa12.43□□□□□ -0.42
RTN3-205ENST00000356000 NCBP2LA6PVI3 153 aaKnown RBP12.43□□□□□ -0.42
RTN3-205ENST00000356000 LINC00694P0DN24 101 aa12.43□□□□□ -0.42
RTN3-205ENST00000356000 FOXG1P55316 489 aaPredicted RBP12.43□□□□□ -0.42
RTN3-205ENST00000356000 POU2AF1Q16633 256 aa12.43□□□□□ -0.42
RTN3-205ENST00000356000 SFTA2Q6UW10 78 aa12.43□□□□□ -0.42
RTN3-205ENST00000356000 FLYWCH2Q96CP2 140 aaKnown RBP12.43□□□□□ -0.42
RTN3-205ENST00000356000 H3BVH4 76 aa12.42□□□□□ -0.42
RTN3-205ENST00000356000 PRNTQ86SH4 94 aa12.42□□□□□ -0.42
RTN3-205ENST00000356000 GGNQ86UU5 652 aa12.42□□□□□ -0.42
RTN3-205ENST00000356000 TPPP3Q9BW30 176 aa12.42□□□□□ -0.42
RTN3-205ENST00000356000 SIGLEC9Q9Y336 463 aa12.42□□□□□ -0.42
RTN3-205ENST00000356000 IGHV4-34P06331 123 aa12.42□□□□□ -0.42
RTN3-205ENST00000356000 HOXB4P17483 251 aaPredicted RBP12.42□□□□□ -0.42
RTN3-205ENST00000356000 CKS2P33552 79 aa12.42□□□□□ -0.42
RTN3-205ENST00000356000 C1orf229Q6ZS94 237 aaPredicted RBP12.42□□□□□ -0.42
RTN3-205ENST00000356000 ODF3Q96PU9 254 aa12.42□□□□□ -0.42
RTN3-205ENST00000356000 DCTN5Q9BTE1 182 aa12.42□□□□□ -0.42
RTN3-205ENST00000356000 GNG12Q9UBI6 72 aa12.42□□□□□ -0.42
RTN3-205ENST00000356000 CCL3P10147 92 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 B3GALT5-AS1P59052 145 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 PRR7Q8TB68 274 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 CALYQ9NYX4 217 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 MRPL35Q9NZE8 188 aaKnown RBP12.41□□□□□ -0.42
RTN3-205ENST00000356000 IGKV1D-37A0A075B6S9 117 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 GLRXP35754 106 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 UCNP55089 124 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 C21orf62Q9NYP8 219 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 A0A1W2PPC4 97 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 SMKR1H3BMG3 65 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 ZNF134P52741 427 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 C3orf56Q8N813 242 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 C15orf53Q8NAA6 179 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 OR11H6Q8NGC7 330 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 PROCRQ9UNN8 238 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 RAXQ9Y2V3 346 aa12.41□□□□□ -0.42
RTN3-205ENST00000356000 IGHV3-64DA0A0J9YX35 117 aa12.4□□□□□ -0.42
RTN3-205ENST00000356000 UPK2O00526 184 aa12.4□□□□□ -0.42
RTN3-205ENST00000356000 WNT9BO14905 357 aa12.4□□□□□ -0.42
RTN3-205ENST00000356000 C17orf82Q86X59 251 aaPredicted RBP12.4□□□□□ -0.42
RTN3-205ENST00000356000 C11orf53Q8IXP5 236 aa12.4□□□□□ -0.42
RTN3-205ENST00000356000 TFF1P04155 84 aa12.4□□□□□ -0.43
RTN3-205ENST00000356000 GP9P14770 177 aa12.4□□□□□ -0.43
RTN3-205ENST00000356000 LYZL1Q6UWQ5 148 aa12.4□□□□□ -0.43
RTN3-205ENST00000356000 TUSC5Q8IXB3 177 aa12.4□□□□□ -0.43
RTN3-205ENST00000356000 WDFY4Q6ZS81 3184 aa12.39□□□□□ -0.43
RTN3-205ENST00000356000 LOC107984640A0A0U1RRK4 108 aa12.39□□□□□ -0.43
RTN3-205ENST00000356000 CFHR1Q03591 330 aa12.39□□□□□ -0.43
RTN3-205ENST00000356000 LRRC75A-AS1Q8N1F1 130 aa12.39□□□□□ -0.43
RTN3-205ENST00000356000 THAP8Q8NA92 274 aa12.39□□□□□ -0.43
RTN3-205ENST00000356000 NPIPB3Q92617 1050 aa12.39□□□□□ -0.43
RTN3-205ENST00000356000 OTORQ9NRC9 128 aa12.39□□□□□ -0.43
RTN3-205ENST00000356000 NCOR2Q9Y618 2525 aa12.38□□□□□ -0.43
RTN3-205ENST00000356000 SLC25A20O43772 301 aa12.38□□□□□ -0.43
RTN3-205ENST00000356000 GRPP07492 148 aa12.38□□□□□ -0.43
RTN3-205ENST00000356000 RPL7P18124 248 aaKnown RBP12.38□□□□□ -0.43
RTN3-205ENST00000356000 GOLT1AQ6ZVE7 132 aa12.38□□□□□ -0.43
RTN3-205ENST00000356000 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
RTN3-205ENST00000356000 CACNA1BQ00975 2339 aa12.38□□□□□ -0.43
RTN3-205ENST00000356000 H3BTX0 84 aa12.38□□□□□ -0.43
RTN3-205ENST00000356000 MRPL33O75394 65 aaKnown RBP12.38□□□□□ -0.43
RTN3-205ENST00000356000 DUSP14O95147 198 aaKnown RBP12.38□□□□□ -0.43
RTN3-205ENST00000356000 LGALS1P09382 135 aaKnown RBP12.38□□□□□ -0.43
RTN3-205ENST00000356000 CRIP1P50238 77 aa12.38□□□□□ -0.43
RTN3-205ENST00000356000 CD7P09564 240 aa12.37□□□□□ -0.43
RTN3-205ENST00000356000 IGHV3-13P01766 116 aa12.37□□□□□ -0.43
RTN3-205ENST00000356000 IGHG3P01860 377 aa12.37□□□□□ -0.43
RTN3-205ENST00000356000 LOXL3P58215 753 aa12.37□□□□□ -0.43
RTN3-205ENST00000356000 FAM19A5Q7Z5A7 132 aaPredicted RBP12.37□□□□□ -0.43
RTN3-205ENST00000356000 CHCHD5Q9BSY4 110 aa12.37□□□□□ -0.43
RTN3-205ENST00000356000 AAMDCQ9H7C9 122 aa12.37□□□□□ -0.43
RTN3-205ENST00000356000 NXT2Q9NPJ8 142 aaKnown RBP12.37□□□□□ -0.43
RTN3-205ENST00000356000 TNCP24821 2201 aa12.36□□□□□ -0.43
RTN3-205ENST00000356000 ORM2P19652 201 aa12.36□□□□□ -0.43
RTN3-205ENST00000356000 PLNP26678 52 aa12.36□□□□□ -0.43
RTN3-205ENST00000356000 SSR4P51571 173 aa12.36□□□□□ -0.43
RTN3-205ENST00000356000 MRPL23Q16540 153 aaKnown RBP12.36□□□□□ -0.43
RTN3-205ENST00000356000 BAALCQ8WXS3 180 aa12.36□□□□□ -0.43
RTN3-205ENST00000356000 SLC25A39Q9BZJ4 359 aaPredicted RBP12.36□□□□□ -0.43
RTN3-205ENST00000356000 A0A1W2PR77 199 aa12.36□□□□□ -0.43
RTN3-205ENST00000356000 NXPH1P58417 271 aa12.36□□□□□ -0.43
RTN3-205ENST00000356000 HOXA4Q00056 320 aaPredicted RBP12.36□□□□□ -0.43
RTN3-205ENST00000356000 Q8N1Y9 231 aa12.36□□□□□ -0.43
RTN3-205ENST00000356000 DEFB119Q8N690 84 aa12.36□□□□□ -0.43
RTN3-205ENST00000356000 FAM57AQ8TBR7 257 aa12.36□□□□□ -0.43
RTN3-205ENST00000356000 ZNF71Q9NQZ8 489 aaPredicted RBP12.36□□□□□ -0.43
RTN3-205ENST00000356000 NDUFA11Q86Y39 141 aa12.35□□□□□ -0.43
RTN3-205ENST00000356000 ZCCHC24Q8N2G6 241 aaKnown RBP12.35□□□□□ -0.43
RTN3-205ENST00000356000 SAP25Q8TEE9 199 aa12.35□□□□□ -0.43
RTN3-205ENST00000356000 PRORYQ9H606 182 aa12.35□□□□□ -0.43
RTN3-205ENST00000356000 FREM1Q5H8C1 2179 aa12.35□□□□□ -0.43
RTN3-205ENST00000356000 J3KT08 172 aa12.35□□□□□ -0.43
RTN3-205ENST00000356000 CCL11P51671 97 aa12.35□□□□□ -0.43
RTN3-205ENST00000356000 UBTD1Q9HAC8 227 aa12.35□□□□□ -0.43
RTN3-205ENST00000356000 ACACBO00763 2458 aa12.34□□□□□ -0.43
RTN3-205ENST00000356000 TRAV8-4A0A0B4J246 113 aa12.34□□□□□ -0.43
RTN3-205ENST00000356000 C9JAW5 83 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms