RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 H3BMG7 143 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 NPPCP23582 126 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 ZNF56Q15929 161 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 ZFAND6Q6FIF0 208 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 SVIPQ8NHG7 77 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 GAFA1Q96PS6 74 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 KIR2DL4Q99706 377 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 TP73-AS1Q9UF72 201 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 LINC00312Q9Y6C7 94 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 COA6Q5JTJ3 125 aaKnown RBP11.38□□□□□ -0.59
SREBF1-202ENST00000355815 LINC00173Q6ZV60 143 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 MRAP2Q96G30 205 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 IGKV2-40A0A087WW87 121 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-202ENST00000355815 MBD3L4A6NDZ8 208 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-202ENST00000355815 MBD3L3A6NE82 208 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-202ENST00000355815 MBD3L5A6NJ08 208 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-202ENST00000355815 GGTLC3B5MD39 225 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 IGKV2D-40P01614 121 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-202ENST00000355815 RPL15P61313 204 aaKnown RBP11.38□□□□□ -0.59
SREBF1-202ENST00000355815 NPC2P61916 151 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 PRCDQ00LT1 54 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 DAZAP2Q15038 168 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-202ENST00000355815 TMEM155Q4W5P6 130 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 MBD3L2Q8NHZ7 208 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-202ENST00000355815 BOD1L1Q8NFC6 3051 aa11.37□□□□□ -0.59
SREBF1-202ENST00000355815 SRRM4A7MD48 611 aaKnown RBP11.37□□□□□ -0.59
SREBF1-202ENST00000355815 C15orf65H3BRN8 121 aa11.37□□□□□ -0.59
SREBF1-202ENST00000355815 OR10J6PQ8NGY7 276 aa11.37□□□□□ -0.59
SREBF1-202ENST00000355815 SMAD7O15105 426 aaKnown RBP11.37□□□□□ -0.59
SREBF1-202ENST00000355815 WNT2P09544 360 aa11.37□□□□□ -0.59
SREBF1-202ENST00000355815 RBX1P62877 108 aa11.37□□□□□ -0.59
SREBF1-202ENST00000355815 C3orf36Q3SXR2 165 aa11.37□□□□□ -0.59
SREBF1-202ENST00000355815 SORL1Q92673 2214 aa11.37□□□□□ -0.59
SREBF1-202ENST00000355815 USP9XQ93008 2570 aaPredicted RBP11.37□□□□□ -0.59
SREBF1-202ENST00000355815 EBLN2Q6P2I7 272 aa11.37□□□□□ -0.59
SREBF1-202ENST00000355815 CHAC1Q9BUX1 264 aa11.37□□□□□ -0.59
SREBF1-202ENST00000355815 A0A1B0GW15 77 aa11.36□□□□□ -0.59
SREBF1-202ENST00000355815 Q6ZS92 163 aa11.36□□□□□ -0.59
SREBF1-202ENST00000355815 ARPC1AQ92747 370 aa11.36□□□□□ -0.59
SREBF1-202ENST00000355815 RAX2Q96IS3 184 aa11.36□□□□□ -0.59
SREBF1-202ENST00000355815 MEIG1Q5JSS6 88 aa11.36□□□□□ -0.59
SREBF1-202ENST00000355815 C22orf34Q6ZV56 151 aa11.36□□□□□ -0.59
SREBF1-202ENST00000355815 ATP5L2Q7Z4Y8 100 aa11.36□□□□□ -0.59
SREBF1-202ENST00000355815 K7EN84 100 aa11.36□□□□□ -0.59
SREBF1-202ENST00000355815 C1RLQ9NZP8 487 aa11.36□□□□□ -0.59
SREBF1-202ENST00000355815 IGHV2-70DA0A0C4DH43 119 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 TMEM213A2RRL7 107 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 ASCL5Q7RTU5 278 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 IGHV1-24A0A0C4DH33 117 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 C17orf58Q2M2W7 97 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 SH2D6Q7Z4S9 175 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 TEX48A0A1B0GUV7 120 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 APOBEC3AP31941 199 aaPredicted RBP11.35□□□□□ -0.59
SREBF1-202ENST00000355815 ABCA2Q9BZC7 2435 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 IGHV3OR16-12A0A075B7B8 117 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 IGLC7A0M8Q6 106 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 C9orf118A6NHY6 69 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 OTORQ9NRC9 128 aa11.35□□□□□ -0.59
SREBF1-202ENST00000355815 GAGE12HA6NDE8 117 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 C22orf46C9J442 243 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 PF4V1P10720 104 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 CNTFRP26992 372 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 SYT8Q8NBV8 401 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 METTL26Q96S19 204 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 MAP1AP78559 2803 aaPredicted RBP11.34□□□□□ -0.59
SREBF1-202ENST00000355815 TRAV40A0A0B4J280 105 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 SLC25A48Q6ZT89 311 aaKnown RBP11.34□□□□□ -0.59
SREBF1-202ENST00000355815 SEM1Q6ZVN7 128 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 ZNF295-AS1Q8N0V1 137 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 PYGO2Q9BRQ0 406 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 TPSG1Q9NRR2 321 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 PROP1O75360 226 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 TMEM158Q8WZ71 300 aa11.34□□□□□ -0.59
SREBF1-202ENST00000355815 ZNF48Q96MX3 618 aaPredicted RBP11.34□□□□□ -0.59
SREBF1-202ENST00000355815 FABP5P3A8MUU1 101 aa11.33□□□□□ -0.6
SREBF1-202ENST00000355815 KLRD1Q13241 179 aa11.33□□□□□ -0.6
SREBF1-202ENST00000355815 TM4SF5O14894 197 aa11.33□□□□□ -0.6
SREBF1-202ENST00000355815 LY6DQ14210 128 aa11.33□□□□□ -0.6
SREBF1-202ENST00000355815 Q6AWC8 147 aa11.33□□□□□ -0.6
SREBF1-202ENST00000355815 RNF125Q96EQ8 232 aa11.33□□□□□ -0.6
SREBF1-202ENST00000355815 NCKAP5O14513 1909 aa11.33□□□□□ -0.6
SREBF1-202ENST00000355815 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
SREBF1-202ENST00000355815 TMEM178BH3BS89 294 aa11.32□□□□□ -0.6
SREBF1-202ENST00000355815 KIAA1549Q9HCM3 1950 aa11.32□□□□□ -0.6
SREBF1-202ENST00000355815 BRWD1-AS2P59051 145 aa11.32□□□□□ -0.6
SREBF1-202ENST00000355815 IGLV1-44P01699 117 aa11.32□□□□□ -0.6
SREBF1-202ENST00000355815 C21orf62Q9NYP8 219 aa11.32□□□□□ -0.6
SREBF1-202ENST00000355815 VDAC2P45880 294 aaPredicted RBP11.32□□□□□ -0.6
SREBF1-202ENST00000355815 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.32□□□□□ -0.6
SREBF1-202ENST00000355815 OR13C6PQ8NH95 151 aa11.32□□□□□ -0.6
SREBF1-202ENST00000355815 ATP6V0BQ99437 205 aa11.32□□□□□ -0.6
SREBF1-202ENST00000355815 TTTY13Q9BZ97 58 aa11.32□□□□□ -0.6
SREBF1-202ENST00000355815 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
SREBF1-202ENST00000355815 SUMO2P61956 95 aaKnown RBP11.31□□□□□ -0.6
SREBF1-202ENST00000355815 TMEM133Q9H2Q1 129 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 LINC00527Q9UJ94 153 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 LY96Q9Y6Y9 160 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 HCFC1P51610 2035 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 H3BRM9 83 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 TMPRSS3P57727 454 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms