RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 IGLV1-44P01699 117 aa12.18□□□□□ -0.46
STRN3-201ENST00000355683 LEPP41159 167 aa12.18□□□□□ -0.46
STRN3-201ENST00000355683 GTSCR1Q86UQ5 136 aa12.18□□□□□ -0.46
STRN3-201ENST00000355683 VKORC1Q9BQB6 163 aa12.18□□□□□ -0.46
STRN3-201ENST00000355683 TRAV9-1A0A075B6T8 112 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 C8orf49Q96NF6 230 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 SLC25A2Q9BXI2 301 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 OR11H12B2RN74 326 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 TMEM170BQ5T4T1 132 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 FER1L6-AS1Q8NA97 138 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.17□□□□□ -0.46
STRN3-201ENST00000355683 OR11H1Q8NG94 326 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 OR11H2Q8NH07 326 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 LRBAP50851 2863 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 ZNF292O60281 2723 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 IGHV3OR16-12A0A075B7B8 117 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 MEF2CQ06413 473 aaPredicted RBP12.17□□□□□ -0.46
STRN3-201ENST00000355683 C1RLQ9NZP8 487 aa12.17□□□□□ -0.46
STRN3-201ENST00000355683 RELNP78509 3460 aa12.16□□□□□ -0.46
STRN3-201ENST00000355683 GAGE12BA1L429 117 aa12.16□□□□□ -0.46
STRN3-201ENST00000355683 K7EMI3 77 aa12.16□□□□□ -0.46
STRN3-201ENST00000355683 NBR2O15453 112 aa12.16□□□□□ -0.46
STRN3-201ENST00000355683 ARPC1AQ92747 370 aa12.16□□□□□ -0.46
STRN3-201ENST00000355683 C20orf144Q9BQM9 153 aa12.16□□□□□ -0.46
STRN3-201ENST00000355683 CCL25O15444 150 aa12.16□□□□□ -0.46
STRN3-201ENST00000355683 DEFB1P60022 68 aa12.16□□□□□ -0.46
STRN3-201ENST00000355683 GTSF1LQ9H1H1 148 aa12.16□□□□□ -0.46
STRN3-201ENST00000355683 HIST1H1AQ02539 215 aaPredicted RBP12.16□□□□□ -0.46
STRN3-201ENST00000355683 NDUFA4L2Q9NRX3 87 aa12.16□□□□□ -0.46
STRN3-201ENST00000355683 MRPL16Q9NX20 251 aaKnown RBP12.16□□□□□ -0.46
STRN3-201ENST00000355683 DLX6P56179 175 aa12.15□□□□□ -0.46
STRN3-201ENST00000355683 DPF1Q92782 380 aa12.15□□□□□ -0.46
STRN3-201ENST00000355683 EMP1P54849 157 aa12.15□□□□□ -0.46
STRN3-201ENST00000355683 RHOGP84095 191 aa12.15□□□□□ -0.46
STRN3-201ENST00000355683 IFI27L1Q96BM0 104 aa12.15□□□□□ -0.46
STRN3-201ENST00000355683 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
STRN3-201ENST00000355683 IFI27P40305 119 aaPredicted RBP12.15□□□□□ -0.46
STRN3-201ENST00000355683 LYZL1Q6UWQ5 148 aa12.15□□□□□ -0.46
STRN3-201ENST00000355683 PATE2Q6UY27 113 aa12.15□□□□□ -0.46
STRN3-201ENST00000355683 TMEM167AQ8TBQ9 72 aa12.15□□□□□ -0.46
STRN3-201ENST00000355683 FMC1Q96HJ9 113 aa12.15□□□□□ -0.46
STRN3-201ENST00000355683 BUB1B-PAK6H3BSN5 160 aa12.14□□□□□ -0.47
STRN3-201ENST00000355683 C15orf32Q32M92 178 aa12.14□□□□□ -0.47
STRN3-201ENST00000355683 SMIM12Q96EX1 92 aa12.14□□□□□ -0.47
STRN3-201ENST00000355683 PRR20EP86478 221 aa12.14□□□□□ -0.47
STRN3-201ENST00000355683 PRR20CP86479 221 aa12.14□□□□□ -0.47
STRN3-201ENST00000355683 PRR20DP86480 221 aa12.14□□□□□ -0.47
STRN3-201ENST00000355683 PRR20BP86481 221 aa12.14□□□□□ -0.47
STRN3-201ENST00000355683 PRR20AP86496 221 aa12.14□□□□□ -0.47
STRN3-201ENST00000355683 IGF2-ASQ6U949 168 aa12.14□□□□□ -0.47
STRN3-201ENST00000355683 FAM106CPP0CH98 169 aa12.13□□□□□ -0.47
STRN3-201ENST00000355683 RPL13AP40429 203 aaKnown RBP12.13□□□□□ -0.47
STRN3-201ENST00000355683 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
STRN3-201ENST00000355683 C22orf46C9J442 243 aa12.13□□□□□ -0.47
STRN3-201ENST00000355683 TRGV3P03979 118 aa12.13□□□□□ -0.47
STRN3-201ENST00000355683 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
STRN3-201ENST00000355683 ORAOV1Q8WV07 137 aa12.13□□□□□ -0.47
STRN3-201ENST00000355683 KIR2DL5BA0A0G2JN68 375 aa12.13□□□□□ -0.47
STRN3-201ENST00000355683 KIR2DL5BA0A0G2JPC4 375 aa12.13□□□□□ -0.47
STRN3-201ENST00000355683 SAPCD1Q5SSQ6 148 aa12.13□□□□□ -0.47
STRN3-201ENST00000355683 KIR2DL5AQ8N109 375 aa12.13□□□□□ -0.47
STRN3-201ENST00000355683 ATP5J2P56134 94 aa12.12□□□□□ -0.47
STRN3-201ENST00000355683 BCL6BQ8N143 479 aaPredicted RBP12.12□□□□□ -0.47
STRN3-201ENST00000355683 IGHV3-64A0A075B6Q5 118 aa12.12□□□□□ -0.47
STRN3-201ENST00000355683 THBDP07204 575 aa12.12□□□□□ -0.47
STRN3-201ENST00000355683 HERVK_113P61574 105 aa12.12□□□□□ -0.47
STRN3-201ENST00000355683 C8orf46Q8TAG6 207 aa12.12□□□□□ -0.47
STRN3-201ENST00000355683 METTL26Q96S19 204 aa12.12□□□□□ -0.47
STRN3-201ENST00000355683 TRAV40A0A0B4J280 105 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 CRXO43186 299 aaPredicted RBP12.11□□□□□ -0.47
STRN3-201ENST00000355683 HBDP02042 147 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 YPEL3P61236 119 aaPredicted RBP12.11□□□□□ -0.47
STRN3-201ENST00000355683 ZNF256Q9Y2P7 627 aaPredicted RBP12.11□□□□□ -0.47
STRN3-201ENST00000355683 ASH1LQ9NR48 2969 aaKnown RBP12.11□□□□□ -0.47
STRN3-201ENST00000355683 Q71RC1 249 aaPredicted RBP12.11□□□□□ -0.47
STRN3-201ENST00000355683 ST20Q9HBF5 79 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 RNF114Q9Y508 228 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 A0A0G2JLM5 398 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 VMO1Q7Z5L0 202 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 OR5AN1Q8NGI8 311 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 SCGB3A1Q96QR1 104 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 BPESC1Q9GZL8 116 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 NDUFB8O95169 186 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 PRRC2AP48634 2157 aaKnown RBP12.11□□□□□ -0.47
STRN3-201ENST00000355683 Q0VG73 95 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 CPAMD8Q8IZJ3 1885 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 ZNF503Q96F45 646 aa12.11□□□□□ -0.47
STRN3-201ENST00000355683 GNLYP22749 145 aa12.1□□□□□ -0.47
STRN3-201ENST00000355683 PSG9Q00887 426 aa12.1□□□□□ -0.47
STRN3-201ENST00000355683 CCDC144NLQ6NUI1 221 aa12.1□□□□□ -0.47
STRN3-201ENST00000355683 IGFL3Q6UXB1 125 aa12.1□□□□□ -0.47
STRN3-201ENST00000355683 OR10J6PQ8NGY7 276 aa12.1□□□□□ -0.47
STRN3-201ENST00000355683 LINC00477Q96M19 166 aa12.1□□□□□ -0.47
STRN3-201ENST00000355683 OTORQ9NRC9 128 aa12.1□□□□□ -0.47
STRN3-201ENST00000355683 TRAV26-2A0A0B4J265 109 aa12.1□□□□□ -0.47
STRN3-201ENST00000355683 PET117Q6UWS5 81 aa12.1□□□□□ -0.47
STRN3-201ENST00000355683 IGKV3D-20A0A0C4DH25 116 aa12.09□□□□□ -0.47
STRN3-201ENST00000355683 IGKV3OR2-268A0A0C4DH90 116 aa12.09□□□□□ -0.47
STRN3-201ENST00000355683 A0A0U1RRA0 63 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms