RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 IGHV4-38-2P0DP08 117 aa10.92□□□□□ -0.66
TRIM4-201ENST00000349062 CLEC2AQ6UVW9 174 aa10.92□□□□□ -0.66
TRIM4-201ENST00000349062 LINC00322Q6ZN03 302 aaPredicted RBP10.92□□□□□ -0.66
TRIM4-201ENST00000349062 IGLV2-8P01709 118 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 CRYGCP07315 174 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 RHOGP84095 191 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 OR10J3Q5JRS4 329 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 FANCD2OSQ96PS1 177 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 SIRPDQ9H106 197 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 TRBV9A0A0B4J1U6 114 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 IGHV7-81A0A0B4J1V7 117 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 HIGD1CA8MV81 97 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 ODF3BA8MYP8 253 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 NPFFO15130 113 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 RBX1P62877 108 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 ZNF562Q6V9R5 426 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 FAM181BA6NEQ2 426 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 C9JCJ5 164 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 ESDP10768 282 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 LINC00173Q6ZV60 143 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 BPIFA4PQ86YQ2 179 aa10.91□□□□□ -0.66
TRIM4-201ENST00000349062 CENPVL3A0A0U1RRI6 287 aa10.9□□□□□ -0.66
TRIM4-201ENST00000349062 OR4C46A6NHA9 309 aa10.9□□□□□ -0.66
TRIM4-201ENST00000349062 ZNF491Q8N8L2 437 aa10.9□□□□□ -0.66
TRIM4-201ENST00000349062 ORAOV1Q8WV07 137 aa10.9□□□□□ -0.66
TRIM4-201ENST00000349062 TRAV9-2A0A087WT02 112 aa10.9□□□□□ -0.66
TRIM4-201ENST00000349062 GP9P14770 177 aa10.9□□□□□ -0.66
TRIM4-201ENST00000349062 Q8TAT8 98 aa10.9□□□□□ -0.66
TRIM4-201ENST00000349062 BBC3Q96PG8 261 aaPredicted RBP10.9□□□□□ -0.66
TRIM4-201ENST00000349062 OSTCQ9NRP0 149 aa10.9□□□□□ -0.66
TRIM4-201ENST00000349062 HLA-DRB1P01911 266 aa10.9□□□□□ -0.67
TRIM4-201ENST00000349062 RPL11P62913 178 aaKnown RBP10.9□□□□□ -0.67
TRIM4-201ENST00000349062 Q8N9W7 124 aa10.9□□□□□ -0.67
TRIM4-201ENST00000349062 NUP35Q8NFH5 326 aa10.9□□□□□ -0.67
TRIM4-201ENST00000349062 FASNP49327 2511 aaKnown RBP10.89□□□□□ -0.67
TRIM4-201ENST00000349062 TRAV9-1A0A075B6T8 112 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 IGKV2-40A0A087WW87 121 aaPredicted RBP10.89□□□□□ -0.67
TRIM4-201ENST00000349062 IGKV2D-40P01614 121 aaPredicted RBP10.89□□□□□ -0.67
TRIM4-201ENST00000349062 P01737 135 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 TCRAP04437 139 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 STXBP6Q8NFX7 210 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 IGF2BP2-AS1Q96M15 143 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 NAA38Q9BRA0 125 aaKnown RBP10.89□□□□□ -0.67
TRIM4-201ENST00000349062 PIMREGQ9BSJ6 248 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 IZUMO1RA6ND01 250 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 ZNF785A8K8V0 405 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 HSBP1L1C9JCN9 74 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 AMMECR1LQ6DCA0 310 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 DUX5Q96PT3 197 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 C1RLQ9NZP8 487 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 THYN1Q9P016 225 aa10.89□□□□□ -0.67
TRIM4-201ENST00000349062 FSTL3O95633 263 aa10.88□□□□□ -0.67
TRIM4-201ENST00000349062 MRPL52Q86TS9 123 aaKnown RBP10.88□□□□□ -0.67
TRIM4-201ENST00000349062 C5orf17Q8NAS9 161 aa10.88□□□□□ -0.67
TRIM4-201ENST00000349062 INS-IGF2F8WCM5 200 aa10.88□□□□□ -0.67
TRIM4-201ENST00000349062 UBE2E1P51965 193 aa10.88□□□□□ -0.67
TRIM4-201ENST00000349062 FBN2P35556 2912 aa10.88□□□□□ -0.67
TRIM4-201ENST00000349062 SAPCD1Q5SSQ6 148 aa10.88□□□□□ -0.67
TRIM4-201ENST00000349062 GDF5OSQ5U4N7 250 aa10.88□□□□□ -0.67
TRIM4-201ENST00000349062 H3BUX3 64 aa10.87□□□□□ -0.67
TRIM4-201ENST00000349062 HIST1H1EP10412 219 aaKnown RBP10.87□□□□□ -0.67
TRIM4-201ENST00000349062 GPR82Q96P67 336 aa10.87□□□□□ -0.67
TRIM4-201ENST00000349062 TMEM70Q9BUB7 260 aa10.87□□□□□ -0.67
TRIM4-201ENST00000349062 HIF1ANQ9NWT6 349 aa10.87□□□□□ -0.67
TRIM4-201ENST00000349062 A0A087X0K7 114 aa10.87□□□□□ -0.67
TRIM4-201ENST00000349062 SPATA12Q7Z6I5 190 aa10.87□□□□□ -0.67
TRIM4-201ENST00000349062 RNF182Q8N6D2 247 aa10.87□□□□□ -0.67
TRIM4-201ENST00000349062 NDUFA3O95167 84 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 TMEM95Q3KNT9 176 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 NPBQ8NG41 125 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 NF1P21359 2839 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 LEPROTL1O95214 131 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 C8orf49Q96NF6 230 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 RNF5Q99942 180 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 MXRA5Q9NR99 2828 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 IGLV11-55A0A075B6I3 123 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 HIST2H2BCQ6DN03 193 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 AAMDCQ9H7C9 122 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 HELZ2Q9BYK8 2649 aaKnown RBP10.86□□□□□ -0.67
TRIM4-201ENST00000349062 HECTD1Q9ULT8 2610 aa10.86□□□□□ -0.67
TRIM4-201ENST00000349062 BLCAPP62952 87 aa10.85□□□□□ -0.67
TRIM4-201ENST00000349062 SHANK2-AS3Q9BTD1 123 aa10.85□□□□□ -0.67
TRIM4-201ENST00000349062 PF4V1P10720 104 aa10.85□□□□□ -0.67
TRIM4-201ENST00000349062 MINOS1Q5TGZ0 78 aa10.85□□□□□ -0.67
TRIM4-201ENST00000349062 Q6ZS46 218 aa10.85□□□□□ -0.67
TRIM4-201ENST00000349062 MINOS1-NBL1R4GNA1 71 aa10.85□□□□□ -0.67
TRIM4-201ENST00000349062 SERTM2A0A1B0GWG4 89 aa10.85□□□□□ -0.67
TRIM4-201ENST00000349062 CHEK1O14757 476 aa10.85□□□□□ -0.67
TRIM4-201ENST00000349062 EGR2P11161 476 aaPredicted RBP10.85□□□□□ -0.67
TRIM4-201ENST00000349062 MRPS16Q9Y3D3 137 aaKnown RBP10.85□□□□□ -0.67
TRIM4-201ENST00000349062 SMIM27A0A1W2PRY6 76 aa10.84□□□□□ -0.67
TRIM4-201ENST00000349062 CTSGP08311 255 aa10.84□□□□□ -0.67
TRIM4-201ENST00000349062 SRD5A1P18405 259 aa10.84□□□□□ -0.67
TRIM4-201ENST00000349062 HIST2H2BDQ6DRA6 164 aa10.84□□□□□ -0.67
TRIM4-201ENST00000349062 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
TRIM4-201ENST00000349062 TRGV3P03979 118 aa10.84□□□□□ -0.67
TRIM4-201ENST00000349062 PPIFP30405 207 aaKnown RBP10.84□□□□□ -0.67
TRIM4-201ENST00000349062 RIPPLY3P57055 190 aa10.84□□□□□ -0.67
TRIM4-201ENST00000349062 COX19Q49B96 90 aa10.84□□□□□ -0.67
TRIM4-201ENST00000349062 MRPL27Q9P0M9 148 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms