RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SLC25A5P05141 298 aaKnown RBP14.15□□□□□ -0.14
CHMP4A-201ENST00000347519 CD7P09564 240 aa14.15□□□□□ -0.14
CHMP4A-201ENST00000347519 ID1P41134 155 aa14.15□□□□□ -0.14
CHMP4A-201ENST00000347519 ZNF124Q15973 351 aa14.15□□□□□ -0.14
CHMP4A-201ENST00000347519 ODF3L2Q3SX64 289 aa14.15□□□□□ -0.14
CHMP4A-201ENST00000347519 PSMG4Q5JS54 123 aa14.15□□□□□ -0.14
CHMP4A-201ENST00000347519 AAMDCQ9H7C9 122 aa14.15□□□□□ -0.14
CHMP4A-201ENST00000347519 MAP6D1Q9H9H5 199 aa14.15□□□□□ -0.14
CHMP4A-201ENST00000347519 DEFB131AP59861 70 aa14.14□□□□□ -0.15
CHMP4A-201ENST00000347519 KRTAP10-11P60412 298 aa14.14□□□□□ -0.15
CHMP4A-201ENST00000347519 MEF2BQ02080 365 aaPredicted RBP14.14□□□□□ -0.15
CHMP4A-201ENST00000347519 EIF5A2Q9GZV4 153 aaKnown RBP14.14□□□□□ -0.15
CHMP4A-201ENST00000347519 MED9Q9NWA0 146 aa14.14□□□□□ -0.15
CHMP4A-201ENST00000347519 RPH3ALQ9UNE2 315 aa14.14□□□□□ -0.15
CHMP4A-201ENST00000347519 SCO2A0A1W2PP80 73 aa14.13□□□□□ -0.15
CHMP4A-201ENST00000347519 F6UB75 175 aa14.13□□□□□ -0.15
CHMP4A-201ENST00000347519 SAMD5Q5TGI4 173 aa14.13□□□□□ -0.15
CHMP4A-201ENST00000347519 SAMD13Q5VXD3 122 aa14.13□□□□□ -0.15
CHMP4A-201ENST00000347519 COMMD7Q86VX2 200 aa14.13□□□□□ -0.15
CHMP4A-201ENST00000347519 ZNF738Q8NE65 137 aa14.13□□□□□ -0.15
CHMP4A-201ENST00000347519 C19orf73Q9NVV2 129 aa14.13□□□□□ -0.15
CHMP4A-201ENST00000347519 EPDR1Q9UM22 224 aa14.13□□□□□ -0.15
CHMP4A-201ENST00000347519 DIRC3C9JPN6 131 aa14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 ZNF705DP0CH99 300 aaPredicted RBP14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 ZNF705BP0CI00 300 aaPredicted RBP14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 GDF5OSQ5U4N7 250 aa14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 C5orf17Q8NAS9 161 aa14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 RPUSD4Q96CM3 377 aaKnown RBP14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 MRPL53Q96EL3 112 aaKnown RBP14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 GPR61Q9BZJ8 451 aa14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 WFDC10AQ9H1F0 79 aa14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 PRELID1Q9Y255 219 aa14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 AGRNO00468 2067 aa14.12□□□□□ -0.15
CHMP4A-201ENST00000347519 IGKV2-40A0A087WW87 121 aaPredicted RBP14.11□□□□□ -0.15
CHMP4A-201ENST00000347519 RAB19A4D1S5 217 aa14.11□□□□□ -0.15
CHMP4A-201ENST00000347519 IGKV2D-40P01614 121 aaPredicted RBP14.11□□□□□ -0.15
CHMP4A-201ENST00000347519 SNRPD3P62318 126 aaKnown RBP14.11□□□□□ -0.15
CHMP4A-201ENST00000347519 APRG1Q8IVJ8 170 aa14.11□□□□□ -0.15
CHMP4A-201ENST00000347519 NKX6-2Q9C056 277 aaPredicted RBP14.11□□□□□ -0.15
CHMP4A-201ENST00000347519 PEX7O00628 323 aa14.1□□□□□ -0.15
CHMP4A-201ENST00000347519 TCRAP04437 139 aa14.1□□□□□ -0.15
CHMP4A-201ENST00000347519 SRP19P09132 144 aaKnown RBP14.1□□□□□ -0.15
CHMP4A-201ENST00000347519 TAGLN2P37802 199 aaKnown RBP14.1□□□□□ -0.15
CHMP4A-201ENST00000347519 EGFEM1PQ0D2K5 195 aa14.1□□□□□ -0.15
CHMP4A-201ENST00000347519 GOLT1AQ6ZVE7 132 aa14.1□□□□□ -0.15
CHMP4A-201ENST00000347519 CMTM2Q8TAZ6 248 aa14.1□□□□□ -0.15
CHMP4A-201ENST00000347519 LINC00479Q96M42 142 aa14.1□□□□□ -0.15
CHMP4A-201ENST00000347519 PRR25Q96S07 402 aa14.1□□□□□ -0.15
CHMP4A-201ENST00000347519 CLEC5AQ9NY25 188 aa14.1□□□□□ -0.15
CHMP4A-201ENST00000347519 KNCNA6PVL3 124 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 ERCC8Q13216 396 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 C11orf52Q96A22 123 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 SGK494Q96LW2 274 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 VGLL1Q99990 258 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 TXNDC17Q9BRA2 123 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 TRAV34A0A0B4J273 112 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 CSN1S1P47710 185 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 PEA15Q15121 130 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 SLC7A5P1Q8MH63 180 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 C2CD4CQ8TF44 421 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 ASCL2Q99929 193 aa14.09□□□□□ -0.15
CHMP4A-201ENST00000347519 TRAV8-1A0A0A6YYK1 113 aa14.08□□□□□ -0.16
CHMP4A-201ENST00000347519 OR11H12B2RN74 326 aa14.08□□□□□ -0.16
CHMP4A-201ENST00000347519 Q8N1Y9 231 aa14.08□□□□□ -0.16
CHMP4A-201ENST00000347519 OR8A1Q8NGG7 326 aa14.08□□□□□ -0.16
CHMP4A-201ENST00000347519 CITED4Q96RK1 184 aa14.08□□□□□ -0.16
CHMP4A-201ENST00000347519 ATG101Q9BSB4 218 aa14.08□□□□□ -0.16
CHMP4A-201ENST00000347519 DERL1Q9BUN8 251 aa14.08□□□□□ -0.16
CHMP4A-201ENST00000347519 TREM1Q9NP99 234 aa14.08□□□□□ -0.16
CHMP4A-201ENST00000347519 A0A0J9YX75 114 aa14.07□□□□□ -0.16
CHMP4A-201ENST00000347519 F6UZH7 168 aa14.07□□□□□ -0.16
CHMP4A-201ENST00000347519 PDE6DO43924 150 aa14.07□□□□□ -0.16
CHMP4A-201ENST00000347519 IGLV2-11P01706 119 aa14.07□□□□□ -0.16
CHMP4A-201ENST00000347519 ARL6IP6Q8N6S5 226 aa14.07□□□□□ -0.16
CHMP4A-201ENST00000347519 CYB561D1Q8N8Q1 229 aa14.07□□□□□ -0.16
CHMP4A-201ENST00000347519 HIST1H2BAQ96A08 127 aa14.07□□□□□ -0.16
CHMP4A-201ENST00000347519 AGPAT4-IT1Q9H0P7 198 aa14.07□□□□□ -0.16
CHMP4A-201ENST00000347519 SAV1Q9H4B6 383 aaPredicted RBP14.07□□□□□ -0.16
CHMP4A-201ENST00000347519 HIST1H1AQ02539 215 aaPredicted RBP14.06□□□□□ -0.16
CHMP4A-201ENST00000347519 ACTL10Q5JWF8 245 aa14.06□□□□□ -0.16
CHMP4A-201ENST00000347519 DEFB125Q8N687 156 aa14.06□□□□□ -0.16
CHMP4A-201ENST00000347519 TCEAL7Q9BRU2 100 aa14.06□□□□□ -0.16
CHMP4A-201ENST00000347519 AKR1C3P42330 323 aa14.05□□□□□ -0.16
CHMP4A-201ENST00000347519 CEBPGP53567 150 aa14.05□□□□□ -0.16
CHMP4A-201ENST00000347519 FOXI2Q6ZQN5 318 aa14.05□□□□□ -0.16
CHMP4A-201ENST00000347519 EIF4E3Q8N5X7 224 aaKnown RBP14.05□□□□□ -0.16
CHMP4A-201ENST00000347519 FAM110AQ9BQ89 295 aa14.05□□□□□ -0.16
CHMP4A-201ENST00000347519 RBMY1BA6NDE4 496 aaKnown RBP14.04□□□□□ -0.16
CHMP4A-201ENST00000347519 RBMY1EA6NEQ0 496 aaKnown RBP14.04□□□□□ -0.16
CHMP4A-201ENST00000347519 NPIPB6E9PJ23 425 aa14.04□□□□□ -0.16
CHMP4A-201ENST00000347519 TMEM250H0YL14 139 aa14.04□□□□□ -0.16
CHMP4A-201ENST00000347519 RBMY1DP0C7P1 496 aaKnown RBP14.04□□□□□ -0.16
CHMP4A-201ENST00000347519 CNN1P51911 297 aaKnown RBP14.04□□□□□ -0.16
CHMP4A-201ENST00000347519 CMC4P56277 68 aaPredicted RBP14.04□□□□□ -0.16
CHMP4A-201ENST00000347519 GTSCR1Q86UQ5 136 aa14.04□□□□□ -0.16
CHMP4A-201ENST00000347519 Q8TAT8 98 aa14.04□□□□□ -0.16
CHMP4A-201ENST00000347519 KLF12Q9Y4X4 402 aa14.04□□□□□ -0.16
CHMP4A-201ENST00000347519 RBAKDNA6NC62 111 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 H3BMM0 161 aa14.03□□□□□ -0.16
CHMP4A-201ENST00000347519 NDUFS6O75380 124 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms