RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 NPPCP23582 126 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 AKR1C3P42330 323 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 MFAP4P55083 255 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 TIGITQ495A1 244 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 MORN5Q5VZ52 161 aa12□□□□□ -0.49
RAB5C-201ENST00000346213 NDUFA4O00483 81 aa11.99□□□□□ -0.49
RAB5C-201ENST00000346213 HYPMO75409 117 aa11.99□□□□□ -0.49
RAB5C-201ENST00000346213 IGKV1-17P01599 117 aa11.99□□□□□ -0.49
RAB5C-201ENST00000346213 APOHP02749 345 aaPredicted RBP11.99□□□□□ -0.49
RAB5C-201ENST00000346213 PSG1P11464 419 aa11.99□□□□□ -0.49
RAB5C-201ENST00000346213 FCGR2BP31994 310 aaPredicted RBP11.99□□□□□ -0.49
RAB5C-201ENST00000346213 TMEM241Q24JQ0 296 aa11.99□□□□□ -0.49
RAB5C-201ENST00000346213 LINC00305Q7Z4B0 112 aa11.99□□□□□ -0.49
RAB5C-201ENST00000346213 RPUSD4Q96CM3 377 aaKnown RBP11.99□□□□□ -0.49
RAB5C-201ENST00000346213 WWC2-AS2Q96NR7 200 aa11.99□□□□□ -0.49
RAB5C-201ENST00000346213 IGHV3OR16-13A0A075B7E8 117 aa11.98□□□□□ -0.49
RAB5C-201ENST00000346213 IGHV3-74A0A0B4J1X5 117 aa11.98□□□□□ -0.49
RAB5C-201ENST00000346213 TRAV5A0A0B4J249 113 aa11.98□□□□□ -0.49
RAB5C-201ENST00000346213 ORM2P19652 201 aa11.98□□□□□ -0.49
RAB5C-201ENST00000346213 OR1B1Q8NGR6 318 aa11.98□□□□□ -0.49
RAB5C-201ENST00000346213 ZFAND3Q9H8U3 227 aa11.98□□□□□ -0.49
RAB5C-201ENST00000346213 GSN-AS1Q9NRJ2 163 aa11.98□□□□□ -0.49
RAB5C-201ENST00000346213 DYNC2H1Q8NCM8 4307 aaKnown RBP11.97□□□□□ -0.49
RAB5C-201ENST00000346213 ZNF674Q2M3X9 581 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 C15orf54Q8N8G6 183 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 STXBP6Q8NFX7 210 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 OR51G1Q8NGK1 321 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 UHRF2Q96PU4 802 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 ATP6V0BQ99437 205 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 PAXXQ9BUH6 204 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 DAZ1Q9NQZ3 744 aaKnown RBP11.97□□□□□ -0.49
RAB5C-201ENST00000346213 A0A1W2PRE2 83 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 TOMM40O96008 361 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 RD3LP0DJH9 198 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 YPEL3P61236 119 aaPredicted RBP11.97□□□□□ -0.49
RAB5C-201ENST00000346213 GTSCR1Q86UQ5 136 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 C11orf52Q96A22 123 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 TXN2Q99757 166 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 MRPL27Q9P0M9 148 aaKnown RBP11.97□□□□□ -0.49
RAB5C-201ENST00000346213 UFC1Q9Y3C8 167 aa11.97□□□□□ -0.49
RAB5C-201ENST00000346213 COLCA2A8K830 154 aa11.96□□□□□ -0.5
RAB5C-201ENST00000346213 UBE2CO00762 179 aa11.96□□□□□ -0.5
RAB5C-201ENST00000346213 GNG7O60262 68 aa11.96□□□□□ -0.5
RAB5C-201ENST00000346213 NDUFB4O95168 129 aa11.96□□□□□ -0.5
RAB5C-201ENST00000346213 OR10J4P0C629 311 aa11.96□□□□□ -0.5
RAB5C-201ENST00000346213 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.5
RAB5C-201ENST00000346213 FAM110AQ9BQ89 295 aa11.96□□□□□ -0.5
RAB5C-201ENST00000346213 SRD5A3Q9H8P0 318 aa11.96□□□□□ -0.5
RAB5C-201ENST00000346213 HIGD1AQ9Y241 93 aa11.96□□□□□ -0.5
RAB5C-201ENST00000346213 OR11H12B2RN74 326 aa11.95□□□□□ -0.5
RAB5C-201ENST00000346213 RPL23P62829 140 aaKnown RBP11.95□□□□□ -0.5
RAB5C-201ENST00000346213 UBE2L3P68036 154 aaKnown RBP11.95□□□□□ -0.5
RAB5C-201ENST00000346213 ODF3L2Q3SX64 289 aa11.95□□□□□ -0.5
RAB5C-201ENST00000346213 TMEM242Q9NWH2 141 aa11.95□□□□□ -0.5
RAB5C-201ENST00000346213 SMPXQ9UHP9 88 aa11.95□□□□□ -0.5
RAB5C-201ENST00000346213 SCO2A0A1W2PP80 73 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 CXorf65A6NEN9 183 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 CHEK1O14757 476 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 PYYP10082 97 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 LYZP61626 148 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 ZNF124Q15973 351 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 FXYD5Q96DB9 178 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 IGHV3-66A0A0C4DH42 116 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 IGHV7-4-1A0A0J9YVY3 117 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 K7EMT4 169 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 SCGB2A1O75556 95 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 EDA2RQ9HAV5 297 aa11.94□□□□□ -0.5
RAB5C-201ENST00000346213 SACSQ9NZJ4 4579 aa11.93□□□□□ -0.5
RAB5C-201ENST00000346213 C1orf196B1AJZ1 125 aa11.93□□□□□ -0.5
RAB5C-201ENST00000346213 ADIRFQ15847 76 aa11.93□□□□□ -0.5
RAB5C-201ENST00000346213 Q8WTZ3 238 aa11.93□□□□□ -0.5
RAB5C-201ENST00000346213 ISOC2Q96AB3 205 aa11.93□□□□□ -0.5
RAB5C-201ENST00000346213 YPEL4Q96NS1 127 aa11.93□□□□□ -0.5
RAB5C-201ENST00000346213 RHPN1-AS1Q9BWJ2 59 aa11.93□□□□□ -0.5
RAB5C-201ENST00000346213 SLC25A39Q9BZJ4 359 aaPredicted RBP11.93□□□□□ -0.5
RAB5C-201ENST00000346213 CTDSP1Q9GZU7 261 aa11.93□□□□□ -0.5
RAB5C-201ENST00000346213 C5orf52A6NGY3 159 aa11.92□□□□□ -0.5
RAB5C-201ENST00000346213 GGTLC3B5MD39 225 aa11.92□□□□□ -0.5
RAB5C-201ENST00000346213 MT-ND4LP03901 98 aa11.92□□□□□ -0.5
RAB5C-201ENST00000346213 SUMO1P63165 101 aaKnown RBP11.92□□□□□ -0.5
RAB5C-201ENST00000346213 FAM24BQ8N5W8 94 aa11.92□□□□□ -0.5
RAB5C-201ENST00000346213 HIST1H2BAQ96A08 127 aa11.92□□□□□ -0.5
RAB5C-201ENST00000346213 RNF125Q96EQ8 232 aa11.92□□□□□ -0.5
RAB5C-201ENST00000346213 DERL1Q9BUN8 251 aa11.92□□□□□ -0.5
RAB5C-201ENST00000346213 RYR2Q92736 4967 aa11.92□□□□□ -0.5
RAB5C-201ENST00000346213 BTF3P20290 206 aaKnown RBP11.91□□□□□ -0.5
RAB5C-201ENST00000346213 S100A7AQ86SG5 101 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 NIT2Q9NQR4 276 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 PPP1R14DQ9NXH3 145 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 GAR1Q9NY12 217 aaKnown RBP11.91□□□□□ -0.5
RAB5C-201ENST00000346213 TMEM14CQ9P0S9 112 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 TRAV25A0A0B4J276 109 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 C9JCJ5 164 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 H3BRN7 92 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 IL4P05112 153 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 RELQ04864 619 aaPredicted RBP11.91□□□□□ -0.5
RAB5C-201ENST00000346213 DNLZQ5SXM8 178 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 LINC01551Q86U37 167 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 SHANK2-AS3Q9BTD1 123 aa11.91□□□□□ -0.5
RAB5C-201ENST00000346213 LY96Q9Y6Y9 160 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms