RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 HGFACQ04756 655 aa15.87■□□□□ 0.13
HDAC4-201ENST00000345617 SPAARA0A1B0GVQ0 90 aa15.87■□□□□ 0.13
HDAC4-201ENST00000345617 TNRC6BQ9UPQ9 1833 aaKnown RBP15.87■□□□□ 0.13
HDAC4-201ENST00000345617 AZU1P20160 251 aa15.87■□□□□ 0.13
HDAC4-201ENST00000345617 C18orf32Q8TCD1 76 aa15.87■□□□□ 0.13
HDAC4-201ENST00000345617 IGKV1D-43A0A0B4J1Z2 117 aa15.86■□□□□ 0.13
HDAC4-201ENST00000345617 I3L3M4 83 aa15.86■□□□□ 0.13
HDAC4-201ENST00000345617 EREGO14944 169 aa15.86■□□□□ 0.13
HDAC4-201ENST00000345617 RFPL3SP0C7P2 107 aa15.86■□□□□ 0.13
HDAC4-201ENST00000345617 IGHV2-26A0A0B4J1V2 119 aa15.86■□□□□ 0.13
HDAC4-201ENST00000345617 TSSC4Q9Y5U2 329 aaPredicted RBP15.86■□□□□ 0.13
HDAC4-201ENST00000345617 GFI1Q99684 422 aa15.86■□□□□ 0.13
HDAC4-201ENST00000345617 CELA3BP08861 270 aa15.86■□□□□ 0.13
HDAC4-201ENST00000345617 IGLV3-12A0A075B6K2 115 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 A0A0U1RRA0 63 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 M0R1W7 72 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 ATP5G1P05496 136 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 IGHG3P01860 377 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 LGALS9BQ3B8N2 356 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 LGALS9CQ6DKI2 356 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 DOPEY1Q5JWR5 2465 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 IGHV3OR16-8A0A075B7F1 116 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 J3KT08 172 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 CDKN1AP38936 164 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 RNASE6Q93091 150 aaKnown RBP15.85■□□□□ 0.13
HDAC4-201ENST00000345617 SCRT1Q9BWW7 348 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 RPL15P61313 204 aaKnown RBP15.85■□□□□ 0.13
HDAC4-201ENST00000345617 LYZL4Q96KX0 146 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 BVES-AS1Q5T3Y7 98 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 SPXQ9BT56 116 aa15.85■□□□□ 0.13
HDAC4-201ENST00000345617 STPG4Q8N801 248 aa15.84■□□□□ 0.13
HDAC4-201ENST00000345617 TRGV1A0A0A0MS02 117 aa15.84■□□□□ 0.13
HDAC4-201ENST00000345617 SMIM27A0A1W2PRY6 76 aa15.84■□□□□ 0.13
HDAC4-201ENST00000345617 PFN1P07737 140 aaKnown RBP15.84■□□□□ 0.13
HDAC4-201ENST00000345617 C1orf122Q6ZSJ8 110 aa15.84■□□□□ 0.13
HDAC4-201ENST00000345617 C14orf178Q8N769 122 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-201ENST00000345617 Q8N8P6 123 aa15.84■□□□□ 0.13
HDAC4-201ENST00000345617 C1orf159Q96HA4 380 aa15.84■□□□□ 0.13
HDAC4-201ENST00000345617 ATOX1O00244 68 aa15.84■□□□□ 0.13
HDAC4-201ENST00000345617 TIMM23O14925 209 aa15.84■□□□□ 0.13
HDAC4-201ENST00000345617 CD33P20138 364 aa15.84■□□□□ 0.13
HDAC4-201ENST00000345617 IGLC2P0DOY2 106 aa15.83■□□□□ 0.13
HDAC4-201ENST00000345617 IGLC3P0DOY3 106 aa15.83■□□□□ 0.13
HDAC4-201ENST00000345617 SLC25A16P16260 332 aa15.83■□□□□ 0.13
HDAC4-201ENST00000345617 PATE3B3GLJ2 98 aa15.83■□□□□ 0.12
HDAC4-201ENST00000345617 FOXG1P55316 489 aaPredicted RBP15.83■□□□□ 0.12
HDAC4-201ENST00000345617 FAM231DQ6ZW35 169 aa15.83■□□□□ 0.12
HDAC4-201ENST00000345617 IGHV3-11P01762 117 aa15.83■□□□□ 0.12
HDAC4-201ENST00000345617 HTN3P15516 51 aa15.83■□□□□ 0.12
HDAC4-201ENST00000345617 PPIFP30405 207 aaKnown RBP15.83■□□□□ 0.12
HDAC4-201ENST00000345617 IGLV3-19P01714 112 aa15.82■□□□□ 0.12
HDAC4-201ENST00000345617 DAZ1Q9NQZ3 744 aaKnown RBP15.82■□□□□ 0.12
HDAC4-201ENST00000345617 FGF6P10767 208 aa15.82■□□□□ 0.12
HDAC4-201ENST00000345617 CRYGSP22914 178 aa15.82■□□□□ 0.12
HDAC4-201ENST00000345617 H0YJW9 148 aa15.82■□□□□ 0.12
HDAC4-201ENST00000345617 RBM3P98179 157 aaKnown RBP15.82■□□□□ 0.12
HDAC4-201ENST00000345617 FDCSPQ8NFU4 85 aa15.82■□□□□ 0.12
HDAC4-201ENST00000345617 NOTCH4Q99466 2003 aa15.82■□□□□ 0.12
HDAC4-201ENST00000345617 IGHV1-8P0DP01 117 aa15.82■□□□□ 0.12
HDAC4-201ENST00000345617 FOXL2P58012 376 aa15.82■□□□□ 0.12
HDAC4-201ENST00000345617 AMN1Q8IY45 258 aa15.82■□□□□ 0.12
HDAC4-201ENST00000345617 TCF15Q12870 199 aa15.81■□□□□ 0.12
HDAC4-201ENST00000345617 TRAV40A0A0B4J280 105 aa15.81■□□□□ 0.12
HDAC4-201ENST00000345617 FAM104BQ5XKR9 115 aa15.81■□□□□ 0.12
HDAC4-201ENST00000345617 ZNF474Q6S9Z5 364 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-201ENST00000345617 Q6ZVH6 145 aa15.81■□□□□ 0.12
HDAC4-201ENST00000345617 C5orf64Q2M2E5 130 aa15.81■□□□□ 0.12
HDAC4-201ENST00000345617 F8VRH5 84 aa15.81■□□□□ 0.12
HDAC4-201ENST00000345617 SHANK2-AS3Q9BTD1 123 aa15.81■□□□□ 0.12
HDAC4-201ENST00000345617 ETDBQ3ZM63 59 aa15.8■□□□□ 0.12
HDAC4-201ENST00000345617 IGKV1-5P01602 117 aa15.8■□□□□ 0.12
HDAC4-201ENST00000345617 HLA-DRB4P13762 266 aa15.8■□□□□ 0.12
HDAC4-201ENST00000345617 HLA-DRB4X5D2U9 266 aa15.8■□□□□ 0.12
HDAC4-201ENST00000345617 ADCYAP1P18509 176 aa15.8■□□□□ 0.12
HDAC4-201ENST00000345617 CEACAM8P31997 349 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-201ENST00000345617 MESP1Q9BRJ9 268 aa15.8■□□□□ 0.12
HDAC4-201ENST00000345617 TP53TG1Q9Y2A0 90 aa15.8■□□□□ 0.12
HDAC4-201ENST00000345617 TMEM14BQ9NUH8 114 aa15.79■□□□□ 0.12
HDAC4-201ENST00000345617 IGHV1-3A0A0C4DH29 117 aa15.79■□□□□ 0.12
HDAC4-201ENST00000345617 THBDP07204 575 aa15.79■□□□□ 0.12
HDAC4-201ENST00000345617 IGHV2-5P01817 119 aa15.78■□□□□ 0.12
HDAC4-201ENST00000345617 CCL3L1P16619 93 aa15.78■□□□□ 0.12
HDAC4-201ENST00000345617 NKAPP1Q8N9T2 125 aa15.78■□□□□ 0.12
HDAC4-201ENST00000345617 GAS1P54826 345 aa15.78■□□□□ 0.12
HDAC4-201ENST00000345617 ZCCHC24Q8N2G6 241 aaKnown RBP15.78■□□□□ 0.12
HDAC4-201ENST00000345617 IGKV1D-8A0A087WSZ0 117 aa15.78■□□□□ 0.12
HDAC4-201ENST00000345617 TFF2Q03403 129 aa15.77■□□□□ 0.12
HDAC4-201ENST00000345617 IGHV3OR16-10A0A075B7F0 116 aa15.77■□□□□ 0.12
HDAC4-201ENST00000345617 HERVK_113P63121 156 aa15.77■□□□□ 0.12
HDAC4-201ENST00000345617 TIAF1O95411 115 aa15.77■□□□□ 0.11
HDAC4-201ENST00000345617 VMO1Q7Z5L0 202 aa15.77■□□□□ 0.11
HDAC4-201ENST00000345617 LINC01560Q8TB33 94 aa15.77■□□□□ 0.11
HDAC4-201ENST00000345617 CARD19Q96LW7 228 aa15.77■□□□□ 0.11
HDAC4-201ENST00000345617 C15orf62A8K5M9 175 aa15.77■□□□□ 0.11
HDAC4-201ENST00000345617 TRBV25-1A0A075B6N4 114 aa15.77■□□□□ 0.11
HDAC4-201ENST00000345617 ZNF114Q8NC26 417 aa15.77■□□□□ 0.11
HDAC4-201ENST00000345617 CCDC168Q8NDH2 2452 aa15.77■□□□□ 0.11
HDAC4-201ENST00000345617 QRFPP83859 136 aa15.76■□□□□ 0.11
HDAC4-201ENST00000345617 ZNF625Q96I27 306 aaPredicted RBP15.76■□□□□ 0.11
HDAC4-201ENST00000345617 PRSS47A8MTI9 375 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms