RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 C20orf78Q9BR46 151 aa11.72□□□□□ -0.53
CLCN1-201ENST00000343257 TRAV40A0A0B4J280 105 aa11.72□□□□□ -0.53
CLCN1-201ENST00000343257 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
CLCN1-201ENST00000343257 CRYGCP07315 174 aa11.72□□□□□ -0.53
CLCN1-201ENST00000343257 MRGPRG-AS1Q2M3A8 158 aa11.72□□□□□ -0.53
CLCN1-201ENST00000343257 KLF17Q5JT82 389 aaPredicted RBP11.72□□□□□ -0.53
CLCN1-201ENST00000343257 FBXL15Q9H469 300 aa11.72□□□□□ -0.53
CLCN1-201ENST00000343257 A0A1B0GWB2 263 aa11.71□□□□□ -0.53
CLCN1-201ENST00000343257 TMEM8BA6NDV4 472 aa11.71□□□□□ -0.53
CLCN1-201ENST00000343257 J3QR89 54 aa11.71□□□□□ -0.53
CLCN1-201ENST00000343257 PRRG2O14669 202 aa11.71□□□□□ -0.53
CLCN1-201ENST00000343257 TM4SF5O14894 197 aa11.71□□□□□ -0.53
CLCN1-201ENST00000343257 IL4P05112 153 aa11.71□□□□□ -0.53
CLCN1-201ENST00000343257 GLRXP35754 106 aa11.71□□□□□ -0.53
CLCN1-201ENST00000343257 PLGLAQ15195 96 aa11.71□□□□□ -0.53
CLCN1-201ENST00000343257 SIGLEC15Q6ZMC9 328 aa11.71□□□□□ -0.53
CLCN1-201ENST00000343257 CEND1Q8N111 149 aa11.71□□□□□ -0.53
CLCN1-201ENST00000343257 PHLDA1Q8WV24 401 aaPredicted RBP11.71□□□□□ -0.53
CLCN1-201ENST00000343257 SCGB2A2Q13296 93 aa11.71□□□□□ -0.54
CLCN1-201ENST00000343257 ZGRF1Q86YA3 2104 aa11.71□□□□□ -0.54
CLCN1-201ENST00000343257 PRR33A8MZF0 331 aa11.7□□□□□ -0.54
CLCN1-201ENST00000343257 IGKCP01834 107 aa11.7□□□□□ -0.54
CLCN1-201ENST00000343257 ODF1Q14990 250 aa11.7□□□□□ -0.54
CLCN1-201ENST00000343257 C1orf162Q8NEQ5 155 aaPredicted RBP11.7□□□□□ -0.54
CLCN1-201ENST00000343257 HIST1H4GQ99525 98 aa11.7□□□□□ -0.54
CLCN1-201ENST00000343257 HHLA3Q9XRX5 114 aa11.7□□□□□ -0.54
CLCN1-201ENST00000343257 ORM1P02763 201 aa11.7□□□□□ -0.54
CLCN1-201ENST00000343257 CRYBA4P53673 196 aa11.7□□□□□ -0.54
CLCN1-201ENST00000343257 FOXI2Q6ZQN5 318 aa11.7□□□□□ -0.54
CLCN1-201ENST00000343257 NDUFA3O95167 84 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 EGR2P11161 476 aaPredicted RBP11.69□□□□□ -0.54
CLCN1-201ENST00000343257 TMEM158Q8WZ71 300 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 SCNM1Q9BWG6 230 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 PLSCR4Q9NRQ2 329 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 CNOT1A5YKK6 2376 aaKnown RBP11.69□□□□□ -0.54
CLCN1-201ENST00000343257 GAGE13Q4V321 117 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 ZNF493Q6ZR52 646 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 FDCSPQ8NFU4 85 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 IGHV3-35A0A0C4DH35 117 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 LAMTOR5O43504 91 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 IGKV1-17P01599 117 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 IGHV3-23P01764 117 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 HLA-DMBP28068 263 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 MALRD1Q5VYJ5 2156 aa11.69□□□□□ -0.54
CLCN1-201ENST00000343257 GVINP1Q7Z2Y8 2422 aa11.68□□□□□ -0.54
CLCN1-201ENST00000343257 INS-IGF2F8WCM5 200 aa11.68□□□□□ -0.54
CLCN1-201ENST00000343257 CNIH1O95406 144 aa11.68□□□□□ -0.54
CLCN1-201ENST00000343257 ZNF80P51504 273 aaPredicted RBP11.68□□□□□ -0.54
CLCN1-201ENST00000343257 PAX8Q06710 450 aa11.68□□□□□ -0.54
CLCN1-201ENST00000343257 ZNF474Q6S9Z5 364 aaPredicted RBP11.68□□□□□ -0.54
CLCN1-201ENST00000343257 MAP1LC3AQ9H492 121 aa11.68□□□□□ -0.54
CLCN1-201ENST00000343257 DMXL1Q9Y485 3027 aa11.68□□□□□ -0.54
CLCN1-201ENST00000343257 CACNA1BQ00975 2339 aa11.68□□□□□ -0.54
CLCN1-201ENST00000343257 A0A1B0GW15 77 aa11.68□□□□□ -0.54
CLCN1-201ENST00000343257 FAM27E3Q08E93 113 aa11.68□□□□□ -0.54
CLCN1-201ENST00000343257 ATMQ13315 3056 aa11.68□□□□□ -0.54
CLCN1-201ENST00000343257 E9PLD3 99 aa11.67□□□□□ -0.54
CLCN1-201ENST00000343257 MRPL35Q9NZE8 188 aaKnown RBP11.67□□□□□ -0.54
CLCN1-201ENST00000343257 U3KQK5 164 aa11.67□□□□□ -0.54
CLCN1-201ENST00000343257 F8W1H4 67 aa11.67□□□□□ -0.54
CLCN1-201ENST00000343257 ARRDC1-AS1Q9H2J1 176 aa11.67□□□□□ -0.54
CLCN1-201ENST00000343257 KLK15Q9H2R5 256 aa11.67□□□□□ -0.54
CLCN1-201ENST00000343257 GEMIN7Q9H840 131 aaKnown RBP11.67□□□□□ -0.54
CLCN1-201ENST00000343257 SMPXQ9UHP9 88 aa11.67□□□□□ -0.54
CLCN1-201ENST00000343257 NDUFS8O00217 210 aa11.67□□□□□ -0.54
CLCN1-201ENST00000343257 HOXB4P17483 251 aaPredicted RBP11.67□□□□□ -0.54
CLCN1-201ENST00000343257 COX7A1P24310 79 aa11.67□□□□□ -0.54
CLCN1-201ENST00000343257 TDHQ8IZJ6 230 aa11.67□□□□□ -0.54
CLCN1-201ENST00000343257 DKK4Q9UBT3 224 aa11.67□□□□□ -0.54
CLCN1-201ENST00000343257 TNRC18O15417 2968 aaPredicted RBP11.66□□□□□ -0.54
CLCN1-201ENST00000343257 GLMPQ8WWB7 406 aa11.66□□□□□ -0.54
CLCN1-201ENST00000343257 LINC00574Q9H8X3 128 aa11.66□□□□□ -0.54
CLCN1-201ENST00000343257 MGAQ8IWI9 3026 aa11.66□□□□□ -0.54
CLCN1-201ENST00000343257 TRAV26-2A0A0B4J265 109 aa11.66□□□□□ -0.54
CLCN1-201ENST00000343257 TGFAP01135 160 aa11.66□□□□□ -0.54
CLCN1-201ENST00000343257 SCGB1A1P11684 91 aa11.66□□□□□ -0.54
CLCN1-201ENST00000343257 Q6AWC8 147 aa11.66□□□□□ -0.54
CLCN1-201ENST00000343257 SHANK2-AS3Q9BTD1 123 aa11.66□□□□□ -0.54
CLCN1-201ENST00000343257 AAMDCQ9H7C9 122 aa11.66□□□□□ -0.54
CLCN1-201ENST00000343257 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
CLCN1-201ENST00000343257 DPM2O94777 84 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 TNFRSF6BO95407 300 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 SEM1Q6ZVN7 128 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 SYT8Q8NBV8 401 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 APOMO95445 188 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 GATA4P43694 442 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 GATD1Q8NB37 220 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 PRSS33Q8NF86 280 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 SVIPQ8NHG7 77 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 PTH2Q96A98 100 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 SH3BGRL2Q9UJC5 107 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 CYSLTR1Q9Y271 337 aa11.65□□□□□ -0.54
CLCN1-201ENST00000343257 NDUFB3O43676 98 aa11.65□□□□□ -0.55
CLCN1-201ENST00000343257 EFNA4P52798 201 aa11.65□□□□□ -0.55
CLCN1-201ENST00000343257 ZNF418Q8TF45 676 aaPredicted RBP11.65□□□□□ -0.55
CLCN1-201ENST00000343257 RNF125Q96EQ8 232 aa11.65□□□□□ -0.55
CLCN1-201ENST00000343257 IGLV3-9A0A075B6K5 115 aa11.64□□□□□ -0.55
CLCN1-201ENST00000343257 TEX22C9J3V5 150 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms