RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 TRAV12-2A0A075B6T6 113 aa14.36□□□□□ -0.11
SYNE2-201ENST00000341472 TRAV5A0A0B4J249 113 aa14.36□□□□□ -0.11
SYNE2-201ENST00000341472 C1QBP02746 253 aa14.36□□□□□ -0.11
SYNE2-201ENST00000341472 BAXQ07812 192 aa14.36□□□□□ -0.11
SYNE2-201ENST00000341472 FAM210BQ96KR6 192 aa14.36□□□□□ -0.11
SYNE2-201ENST00000341472 LINC01587Q99440 93 aa14.36□□□□□ -0.11
SYNE2-201ENST00000341472 SLC39A9Q9NUM3 307 aa14.36□□□□□ -0.11
SYNE2-201ENST00000341472 FXYD6-FXYD2A0A087WZ82 144 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 UBE2L5PA0A1B0GUS4 154 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 HMSDA8MTL9 139 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 G3V3Q6 166 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 SMLR1H3BR10 107 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 H3BTX0 84 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 PRM2P04554 102 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 PRB4P10163 310 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-201ENST00000341472 BAP18Q8IXM2 172 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 INO80EQ8NBZ0 244 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-201ENST00000341472 HYLS1Q96M11 299 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 PFDN5Q99471 154 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 PXMP4Q9Y6I8 212 aa14.35□□□□□ -0.11
SYNE2-201ENST00000341472 H3BQ15 152 aa14.34□□□□□ -0.11
SYNE2-201ENST00000341472 P0DMU3 169 aa14.34□□□□□ -0.11
SYNE2-201ENST00000341472 FAM231AP0DMU4 169 aa14.34□□□□□ -0.11
SYNE2-201ENST00000341472 FAM231CP0DMU5 169 aa14.34□□□□□ -0.11
SYNE2-201ENST00000341472 IGLC2P0DOY2 106 aa14.34□□□□□ -0.11
SYNE2-201ENST00000341472 HTN3P15516 51 aa14.34□□□□□ -0.11
SYNE2-201ENST00000341472 RPL12P30050 165 aaKnown RBP14.34□□□□□ -0.11
SYNE2-201ENST00000341472 DAD1P61803 113 aa14.34□□□□□ -0.11
SYNE2-201ENST00000341472 GUK1Q16774 197 aa14.34□□□□□ -0.11
SYNE2-201ENST00000341472 ZFP69Q49AA0 526 aa14.34□□□□□ -0.11
SYNE2-201ENST00000341472 FGF7P21781 194 aa14.33□□□□□ -0.12
SYNE2-201ENST00000341472 TMEM256Q8N2U0 113 aa14.33□□□□□ -0.12
SYNE2-201ENST00000341472 OR10J6PQ8NGY7 276 aa14.33□□□□□ -0.12
SYNE2-201ENST00000341472 SAT2Q96F10 170 aaPredicted RBP14.33□□□□□ -0.12
SYNE2-201ENST00000341472 TNFSF18Q9UNG2 199 aa14.33□□□□□ -0.12
SYNE2-201ENST00000341472 PRAC2D3DTV9 90 aa14.32□□□□□ -0.12
SYNE2-201ENST00000341472 MPDU1O75352 247 aa14.32□□□□□ -0.12
SYNE2-201ENST00000341472 TSPOP30536 169 aa14.32□□□□□ -0.12
SYNE2-201ENST00000341472 NHLH2Q02577 135 aa14.32□□□□□ -0.12
SYNE2-201ENST00000341472 POM121L12Q8N7R1 296 aa14.32□□□□□ -0.12
SYNE2-201ENST00000341472 AQP10Q96PS8 301 aa14.32□□□□□ -0.12
SYNE2-201ENST00000341472 DNAH6Q9C0G6 4158 aa14.32□□□□□ -0.12
SYNE2-201ENST00000341472 LYRM9A8MSI8 78 aa14.31□□□□□ -0.12
SYNE2-201ENST00000341472 SLC17A3O00476 420 aa14.31□□□□□ -0.12
SYNE2-201ENST00000341472 AZU1P20160 251 aa14.31□□□□□ -0.12
SYNE2-201ENST00000341472 CDKN1BP46527 198 aa14.31□□□□□ -0.12
SYNE2-201ENST00000341472 TAS2R60P59551 318 aa14.31□□□□□ -0.12
SYNE2-201ENST00000341472 CD300CQ08708 224 aa14.31□□□□□ -0.12
SYNE2-201ENST00000341472 OR11H4Q8NGC9 324 aa14.31□□□□□ -0.12
SYNE2-201ENST00000341472 ARPC5O15511 151 aa14.3□□□□□ -0.12
SYNE2-201ENST00000341472 HTN1P15515 57 aa14.3□□□□□ -0.12
SYNE2-201ENST00000341472 ZNF586Q9NXT0 402 aa14.3□□□□□ -0.12
SYNE2-201ENST00000341472 HSPB11Q9Y547 144 aa14.3□□□□□ -0.12
SYNE2-201ENST00000341472 ZNF345Q14585 488 aa14.29□□□□□ -0.12
SYNE2-201ENST00000341472 OR5C1Q8NGR4 320 aa14.29□□□□□ -0.12
SYNE2-201ENST00000341472 A0A0D9SG52 128 aa14.28□□□□□ -0.12
SYNE2-201ENST00000341472 DEFB130BP0DP73 79 aa14.28□□□□□ -0.12
SYNE2-201ENST00000341472 DEFB130AP0DP74 79 aa14.28□□□□□ -0.12
SYNE2-201ENST00000341472 HIST1H1EP10412 219 aaKnown RBP14.28□□□□□ -0.12
SYNE2-201ENST00000341472 NPCDR1Q9BY65 106 aa14.28□□□□□ -0.12
SYNE2-201ENST00000341472 TMEM14CQ9P0S9 112 aa14.28□□□□□ -0.12
SYNE2-201ENST00000341472 FRAS1Q86XX4 4008 aa14.27□□□□□ -0.12
SYNE2-201ENST00000341472 RNF222A6NCQ9 220 aa14.27□□□□□ -0.13
SYNE2-201ENST00000341472 H7BYZ3 331 aa14.27□□□□□ -0.13
SYNE2-201ENST00000341472 ZNF253O75346 499 aa14.27□□□□□ -0.13
SYNE2-201ENST00000341472 ZNF493Q6ZR52 646 aa14.27□□□□□ -0.13
SYNE2-201ENST00000341472 C20orf144Q9BQM9 153 aa14.27□□□□□ -0.13
SYNE2-201ENST00000341472 TIMM9Q9Y5J7 89 aa14.27□□□□□ -0.13
SYNE2-201ENST00000341472 TRBV19A0A075B6N1 114 aa14.26□□□□□ -0.13
SYNE2-201ENST00000341472 PLAC8L1A1L4L8 177 aa14.26□□□□□ -0.13
SYNE2-201ENST00000341472 TAAR5O14804 337 aa14.26□□□□□ -0.13
SYNE2-201ENST00000341472 CLINT1Q14677 625 aa14.26□□□□□ -0.13
SYNE2-201ENST00000341472 GCSAMLQ5JQS6 135 aa14.26□□□□□ -0.13
SYNE2-201ENST00000341472 TMEM88Q6PEY1 159 aa14.26□□□□□ -0.13
SYNE2-201ENST00000341472 KCNRGQ8N5I3 272 aa14.26□□□□□ -0.13
SYNE2-201ENST00000341472 PARD6GQ9BYG4 376 aaPredicted RBP14.26□□□□□ -0.13
SYNE2-201ENST00000341472 CT45A10P0DMU9 189 aa14.25□□□□□ -0.13
SYNE2-201ENST00000341472 KIR3DS1Q14943 382 aa14.25□□□□□ -0.13
SYNE2-201ENST00000341472 UBE2DNLQ8IWF7 75 aa14.25□□□□□ -0.13
SYNE2-201ENST00000341472 CCDC28AQ8IWP9 274 aa14.25□□□□□ -0.13
SYNE2-201ENST00000341472 MRPL53Q96EL3 112 aaKnown RBP14.25□□□□□ -0.13
SYNE2-201ENST00000341472 C16orf74Q96GX8 76 aa14.25□□□□□ -0.13
SYNE2-201ENST00000341472 PRELID1Q9Y255 219 aa14.25□□□□□ -0.13
SYNE2-201ENST00000341472 TIMM8BQ9Y5J9 83 aaPredicted RBP14.25□□□□□ -0.13
SYNE2-201ENST00000341472 CBY3A6NI87 242 aa14.24□□□□□ -0.13
SYNE2-201ENST00000341472 LEPP41159 167 aa14.24□□□□□ -0.13
SYNE2-201ENST00000341472 GFI1BQ5VTD9 330 aa14.24□□□□□ -0.13
SYNE2-201ENST00000341472 ODF3Q96PU9 254 aa14.24□□□□□ -0.13
SYNE2-201ENST00000341472 NPIPB6E9PJ23 425 aa14.23□□□□□ -0.13
SYNE2-201ENST00000341472 NDUFB4O95168 129 aa14.23□□□□□ -0.13
SYNE2-201ENST00000341472 PYYP10082 97 aa14.23□□□□□ -0.13
SYNE2-201ENST00000341472 PDE6HQ13956 83 aa14.23□□□□□ -0.13
SYNE2-201ENST00000341472 LGALSLQ3ZCW2 172 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-201ENST00000341472 BLNKQ8WV28 456 aa14.23□□□□□ -0.13
SYNE2-201ENST00000341472 ATP5SQ99766 215 aa14.23□□□□□ -0.13
SYNE2-201ENST00000341472 WDR61Q9GZS3 305 aaKnown RBP14.23□□□□□ -0.13
SYNE2-201ENST00000341472 KCNIP2Q9NS61 270 aa14.23□□□□□ -0.13
SYNE2-201ENST00000341472 F5H768 121 aa14.22□□□□□ -0.13
SYNE2-201ENST00000341472 J3KRW8 73 aa14.22□□□□□ -0.13
SYNE2-201ENST00000341472 M0R2N4 97 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms