RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 CRXO43186 299 aaPredicted RBP8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 PF4V1P10720 104 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 PSG9Q00887 426 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 SMIM12Q96EX1 92 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 SAP30O75446 220 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 NPC2P61916 151 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 LYZL1Q6UWQ5 148 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 AMTNQ6UX39 209 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 BBC3Q96PG8 261 aaPredicted RBP8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 PSG8Q9UQ74 426 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 A0A1B0GV72 72 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 TMEM178BH3BS89 294 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 C19orf84I3L1E1 186 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 F2RL2O00254 374 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 RAB1CQ92928 201 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 TCRBV4S1A1TA0A5B7 111 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 K7ERJ3 54 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 CLEC19AQ6UXS0 136 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 BCL6BQ8N143 479 aaPredicted RBP8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 RNASEH2CQ8TDP1 164 aaKnown RBP8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 ZNF256Q9Y2P7 627 aaPredicted RBP8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 HIST1H1AQ02539 215 aaPredicted RBP8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 EBLN2Q6P2I7 272 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 CST9LQ9H4G1 147 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 PHLDA3Q9Y5J5 127 aa8.38□□□□□ -1.07
CAPRIN1-201ENST00000341394 ORMDL3Q8N138 153 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 TMEM133Q9H2Q1 129 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 CYSLTR1Q9Y271 337 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 MC5RP33032 325 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 CD300EQ496F6 205 aaPredicted RBP8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 OSR1Q8TAX0 266 aaPredicted RBP8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 ZNF257Q9Y2Q1 563 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 A0A0G2JLM5 398 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 TIMM23O14925 209 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 TMEM200BQ69YZ2 307 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 PPP1R27Q86WC6 154 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 IFI27L1Q96BM0 104 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 C5orf30Q96GV9 206 aa8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 MRPL32Q9BYC8 188 aaKnown RBP8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 MBNL3Q9NUK0 354 aaKnown RBP8.37□□□□□ -1.07
CAPRIN1-201ENST00000341394 PSMB11A5LHX3 300 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 DLX6P56179 175 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 PSG3Q16557 428 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 SAPCD1Q5SSQ6 148 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 FER1L6-AS1Q8NA97 138 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 LHBP01229 141 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 RNASE2P10153 161 aaKnown RBP8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 CEACAM3P40198 252 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 ERCC8Q13216 396 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 KIR3DS1Q14943 382 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 OR10J3Q5JRS4 329 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 C20orf144Q9BQM9 153 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 TENM4Q6N022 2769 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 MFAP4P55083 255 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 SAMD13Q5VXD3 122 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 ZNF295-AS1Q8N0V1 137 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 ZNF843Q8N446 348 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 Q8TCH9 128 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 C8orf49Q96NF6 230 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 GAFA1Q96PS6 74 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 RNF114Q9Y508 228 aa8.36□□□□□ -1.07
CAPRIN1-201ENST00000341394 TRBV6-6A0A0A6YYG2 114 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 OR11H12B2RN74 326 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 DGAT2L7PQ6IED9 249 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 TMEM219Q86XT9 240 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 OR11H1Q8NG94 326 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 OR11H2Q8NH07 326 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 ORAOV1Q8WV07 137 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 ZNF469Q96JG9 3925 aaPredicted RBP8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 WT1-ASQ06250 92 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 SRSF7Q16629 238 aaKnown RBP eCLIP8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 OCIAD2Q56VL3 154 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 UBR5O95071 2799 aaPredicted RBP8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 TRAV26-2A0A0B4J265 109 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 A0A1W2PPI3 338 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 Q6ZS49 121 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 RNF182Q8N6D2 247 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 RNF125Q96EQ8 232 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 COX6B1P14854 86 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 ZC2HC1BQ5TFG8 222 aa8.35□□□□□ -1.07
CAPRIN1-201ENST00000341394 FCN3O75636 299 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 HLA-DMBP28068 263 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 VDAC2P45880 294 aaPredicted RBP8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 ETDBQ3ZM63 59 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 NEU4Q8WWR8 484 aaPredicted RBP8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 ZNF329Q86UD4 541 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 LINC00477Q96M19 166 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 SLC25A39Q9BZJ4 359 aaPredicted RBP8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 ZANQ9Y493 2812 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 TRAV12-3A0A0B4J271 114 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 IGHV1-24A0A0C4DH33 117 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 E7EUB6 86 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 NDUFS7O75251 213 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 IGLV2-14P01704 120 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 ANXA2RQ3ZCQ2 193 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 C21orf62Q9NYP8 219 aa8.34□□□□□ -1.07
CAPRIN1-201ENST00000341394 NEGR1Q7Z3B1 354 aa8.33□□□□□ -1.08
CAPRIN1-201ENST00000341394 SCGB3A1Q96QR1 104 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms