RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TMED6Q8WW62 240 aa9.68□□□□□ -0.86
TUBD1-202ENST00000340993 U3KQK5 164 aa9.68□□□□□ -0.86
TUBD1-202ENST00000340993 IGHV3OR16-12A0A075B7B8 117 aa9.68□□□□□ -0.86
TUBD1-202ENST00000340993 CNN1P51911 297 aaKnown RBP9.68□□□□□ -0.86
TUBD1-202ENST00000340993 ZNF726P1Q15940 193 aa9.68□□□□□ -0.86
TUBD1-202ENST00000340993 SLC50A1Q9BRV3 221 aa9.68□□□□□ -0.86
TUBD1-202ENST00000340993 PLA2G2EQ9NZK7 142 aa9.68□□□□□ -0.86
TUBD1-202ENST00000340993 M0R2Z0 102 aa9.67□□□□□ -0.86
TUBD1-202ENST00000340993 GIG44P09565 113 aaPredicted RBP9.67□□□□□ -0.86
TUBD1-202ENST00000340993 SERF2P84101 59 aa9.67□□□□□ -0.86
TUBD1-202ENST00000340993 ERCC8Q13216 396 aa9.67□□□□□ -0.86
TUBD1-202ENST00000340993 SAMD13Q5VXD3 122 aa9.67□□□□□ -0.86
TUBD1-202ENST00000340993 OVOL2Q9BRP0 275 aa9.67□□□□□ -0.86
TUBD1-202ENST00000340993 ACTR3CQ9C0K3 210 aaPredicted RBP9.67□□□□□ -0.86
TUBD1-202ENST00000340993 TMPRSS5Q9H3S3 457 aa9.67□□□□□ -0.86
TUBD1-202ENST00000340993 PPP1R14DQ9NXH3 145 aa9.67□□□□□ -0.86
TUBD1-202ENST00000340993 DNAH7Q8WXX0 4024 aa9.66□□□□□ -0.86
TUBD1-202ENST00000340993 TRAV12-2A0A075B6T6 113 aa9.66□□□□□ -0.86
TUBD1-202ENST00000340993 IGKV2-40A0A087WW87 121 aaPredicted RBP9.66□□□□□ -0.86
TUBD1-202ENST00000340993 DEFB4AO15263 64 aa9.66□□□□□ -0.86
TUBD1-202ENST00000340993 IGKV2D-40P01614 121 aaPredicted RBP9.66□□□□□ -0.86
TUBD1-202ENST00000340993 MBP02144 154 aa9.66□□□□□ -0.86
TUBD1-202ENST00000340993 NHLRC4P0CG21 123 aaPredicted RBP9.66□□□□□ -0.86
TUBD1-202ENST00000340993 GUK1Q16774 197 aa9.66□□□□□ -0.86
TUBD1-202ENST00000340993 SPINK13Q1W4C9 94 aa9.66□□□□□ -0.86
TUBD1-202ENST00000340993 C9orf62Q8N4C0 152 aa9.66□□□□□ -0.86
TUBD1-202ENST00000340993 OR8A1Q8NGG7 326 aa9.66□□□□□ -0.86
TUBD1-202ENST00000340993 FAM213BQ8TBF2 198 aa9.66□□□□□ -0.86
TUBD1-202ENST00000340993 Q9H3A6 140 aa9.66□□□□□ -0.86
TUBD1-202ENST00000340993 SPRY2O43597 315 aa9.65□□□□□ -0.86
TUBD1-202ENST00000340993 TPT1P13693 172 aaKnown RBP9.65□□□□□ -0.86
TUBD1-202ENST00000340993 UBE2G2P60604 165 aa9.65□□□□□ -0.86
TUBD1-202ENST00000340993 AAMDCQ9H7C9 122 aa9.65□□□□□ -0.86
TUBD1-202ENST00000340993 KIR2DL5BA0A0G2JN68 375 aa9.65□□□□□ -0.87
TUBD1-202ENST00000340993 KIR2DL5BA0A0G2JPC4 375 aa9.65□□□□□ -0.87
TUBD1-202ENST00000340993 GNG5P63218 68 aa9.65□□□□□ -0.87
TUBD1-202ENST00000340993 PSG9Q00887 426 aa9.65□□□□□ -0.87
TUBD1-202ENST00000340993 BAP18Q8IXM2 172 aa9.65□□□□□ -0.87
TUBD1-202ENST00000340993 KIR2DL5AQ8N109 375 aa9.65□□□□□ -0.87
TUBD1-202ENST00000340993 KIR2DL5BQ8NHK3 375 aa9.65□□□□□ -0.87
TUBD1-202ENST00000340993 STAG3L2P0CL84 134 aa9.64□□□□□ -0.87
TUBD1-202ENST00000340993 STAG3L3P0CL85 134 aa9.64□□□□□ -0.87
TUBD1-202ENST00000340993 GCHFRP30047 84 aa9.64□□□□□ -0.87
TUBD1-202ENST00000340993 FAM74A1Q5RGS3 127 aa9.64□□□□□ -0.87
TUBD1-202ENST00000340993 PQLC2Q6ZP29 291 aa9.64□□□□□ -0.87
TUBD1-202ENST00000340993 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
TUBD1-202ENST00000340993 OR11H2Q8NH07 326 aa9.64□□□□□ -0.87
TUBD1-202ENST00000340993 CTXND1A0A1B0GTU2 59 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 MAP1LC3B2A6NCE7 125 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 PGPA6NDG6 321 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 NUTF2P61970 127 aaKnown RBP9.63□□□□□ -0.87
TUBD1-202ENST00000340993 KIR3DS1Q14943 382 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 RNF183Q96D59 192 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 VGLL1Q99990 258 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 MAP1LC3BQ9GZQ8 125 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 CXorf1O96002 111 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 PRM2P04554 102 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 PDE6HQ13956 83 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 MORN3Q6PF18 240 aaPredicted RBP9.63□□□□□ -0.87
TUBD1-202ENST00000340993 Q6ZWC4 215 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 Q8TAT8 98 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 SGK494Q96LW2 274 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 RARRES2Q99969 163 aa9.63□□□□□ -0.87
TUBD1-202ENST00000340993 A0A0J9YWU9 116 aa9.62□□□□□ -0.87
TUBD1-202ENST00000340993 BOLA2-SMG1P6H3BVE0 249 aa9.62□□□□□ -0.87
TUBD1-202ENST00000340993 UBE2CO00762 179 aa9.62□□□□□ -0.87
TUBD1-202ENST00000340993 DUSP14O95147 198 aaKnown RBP9.62□□□□□ -0.87
TUBD1-202ENST00000340993 SEC11BP0C7V7 166 aa9.62□□□□□ -0.87
TUBD1-202ENST00000340993 EIF5AP63241 154 aaKnown RBP9.62□□□□□ -0.87
TUBD1-202ENST00000340993 AMTNQ6UX39 209 aa9.62□□□□□ -0.87
TUBD1-202ENST00000340993 CSMD3Q7Z407 3707 aa9.61□□□□□ -0.87
TUBD1-202ENST00000340993 ZNF253O75346 499 aa9.61□□□□□ -0.87
TUBD1-202ENST00000340993 HTN1P15515 57 aa9.61□□□□□ -0.87
TUBD1-202ENST00000340993 STOML3Q8TAV4 291 aa9.61□□□□□ -0.87
TUBD1-202ENST00000340993 CMTM2Q8TAZ6 248 aa9.61□□□□□ -0.87
TUBD1-202ENST00000340993 SFT2D1Q8WV19 159 aa9.61□□□□□ -0.87
TUBD1-202ENST00000340993 SLC25A5P05141 298 aaKnown RBP9.6□□□□□ -0.87
TUBD1-202ENST00000340993 CT45A10P0DMU9 189 aa9.6□□□□□ -0.87
TUBD1-202ENST00000340993 CSN1S1P47710 185 aa9.6□□□□□ -0.87
TUBD1-202ENST00000340993 ALKAL2Q6UX46 152 aa9.6□□□□□ -0.87
TUBD1-202ENST00000340993 SLC51BQ86UW2 128 aa9.6□□□□□ -0.87
TUBD1-202ENST00000340993 TMEM208Q9BTX3 173 aa9.6□□□□□ -0.87
TUBD1-202ENST00000340993 EMP1P54849 157 aa9.6□□□□□ -0.87
TUBD1-202ENST00000340993 GOLT1AQ6ZVE7 132 aa9.6□□□□□ -0.87
TUBD1-202ENST00000340993 OTORQ9NRC9 128 aa9.6□□□□□ -0.87
TUBD1-202ENST00000340993 YTHDF2Q9Y5A9 579 aaKnown RBP9.6□□□□□ -0.87
TUBD1-202ENST00000340993 TRAV8-1A0A0A6YYK1 113 aa9.59□□□□□ -0.87
TUBD1-202ENST00000340993 CSNK1G2-AS1Q8NCQ2 148 aa9.59□□□□□ -0.87
TUBD1-202ENST00000340993 AGPAT4-IT1Q9H0P7 198 aa9.59□□□□□ -0.87
TUBD1-202ENST00000340993 STARD9Q9P2P6 4700 aa9.58□□□□□ -0.88
TUBD1-202ENST00000340993 GGTLC3B5MD39 225 aa9.58□□□□□ -0.88
TUBD1-202ENST00000340993 CRXO43186 299 aaPredicted RBP9.58□□□□□ -0.88
TUBD1-202ENST00000340993 RBMY1A1P0DJD3 496 aaKnown RBP9.58□□□□□ -0.88
TUBD1-202ENST00000340993 RBMY1CP0DJD4 496 aa9.58□□□□□ -0.88
TUBD1-202ENST00000340993 SUMO1P63165 101 aaKnown RBP9.58□□□□□ -0.88
TUBD1-202ENST00000340993 RBMY1FQ15415 496 aaKnown RBP9.58□□□□□ -0.88
TUBD1-202ENST00000340993 TMEM78Q5T7P6 136 aa9.58□□□□□ -0.88
TUBD1-202ENST00000340993 C1QTNF4Q9BXJ3 329 aa9.58□□□□□ -0.88
TUBD1-202ENST00000340993 TMEM167BQ9NRX6 74 aa9.58□□□□□ -0.88
TUBD1-202ENST00000340993 PRELID1Q9Y255 219 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms