RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 RBMY1FQ15415 496 aaKnown RBP9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 VWC2Q2TAL6 325 aa9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 FAM78BQ5VT40 261 aa9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 ZNF705AQ6ZN79 300 aaPredicted RBP9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 Q6ZRG5 221 aa9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 ZNF709Q8N972 641 aa9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 OR4B1Q8NGF8 309 aa9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 C17orf77Q96MU5 243 aa9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 OR5AC2Q9NZP5 309 aa9.65□□□□□ -0.86
SIRPB3P-201ENST00000340424 TMEM189A5PLL7 270 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 A8MTW9 85 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 ZNF705FA8MVS1 300 aaPredicted RBP9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 DEFB4AO15263 64 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 COX7A2P2O60397 106 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 CST7O76096 145 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 AMBPP02760 352 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 ZNF705DP0CH99 300 aaPredicted RBP9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 ZNF705BP0CI00 300 aaPredicted RBP9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 CAMLGP49069 296 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 SULT1A2P50226 295 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 RAB32Q13637 225 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 ATP6V1FQ16864 119 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 ATRAIDQ6UW56 229 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 LINC00305Q7Z4B0 112 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 LYPD6BQ8NI32 183 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 UHRF2Q96PU4 802 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 PFDN5Q99471 154 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 MGST2Q99735 147 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 SEC11CQ9BY50 192 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 WDR83OSQ9Y284 106 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 GOLT1BQ9Y3E0 138 aa9.64□□□□□ -0.87
SIRPB3P-201ENST00000340424 FAM24AA6NFZ4 105 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 MPDU1O75352 247 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 IGKV3-20P01619 116 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 BLOC1S1P78537 153 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 LCN15Q6UWW0 184 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 PATE2Q6UY27 113 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 BPIFA4PQ86YQ2 179 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 TMEM252Q8N6L7 170 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 OR1L4Q8NGR5 311 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 C2CD4CQ8TF44 421 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 C20orf173Q96LM9 149 aa9.63□□□□□ -0.87
SIRPB3P-201ENST00000340424 TRAV8-2A0A0B4J237 113 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 TEX48A0A1B0GUV7 120 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 IGSF23A1L1A6 192 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 E5RGE8 158 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 F6UB75 175 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 ADCYAP1P18509 176 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 RPL29P47914 159 aaKnown RBP9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 DEFB1P60022 68 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 C10orf113Q5VZT2 155 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 ZNF738Q8NE65 137 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 TMED6Q8WW62 240 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 SLC50A1Q9BRV3 221 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 SLC25A31Q9H0C2 315 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 DNAJC4Q9NNZ3 241 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 RFNGQ9Y644 331 aa9.62□□□□□ -0.87
SIRPB3P-201ENST00000340424 TRAV10A0A0B4J240 114 aa9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 FAM74A7A6NL05 159 aa9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 LY6G6CO95867 125 aa9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 HLA-DMBP28068 263 aa9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 CNN1P51911 297 aaKnown RBP9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 B2MP61769 119 aa9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 BAXQ07812 192 aa9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 GUK1Q16774 197 aa9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 FAM74A3Q4VXF1 159 aa9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 TMEM37Q8WXS4 190 aa9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 SLC35B3Q9H1N7 401 aa9.61□□□□□ -0.87
SIRPB3P-201ENST00000340424 UBE2L5PA0A1B0GUS4 154 aa9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 SNAPINO95295 136 aa9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 SEC11BP0C7V7 166 aa9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 RPL12P30050 165 aaKnown RBP9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 PSG3Q16557 428 aa9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 LGALS9CQ6DKI2 356 aa9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 AMTNQ6UX39 209 aa9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 RNF182Q8N6D2 247 aa9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 IGF2BP2-AS1Q96M15 143 aa9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 PRELID1Q9Y255 219 aa9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 PXMP4Q9Y6I8 212 aa9.6□□□□□ -0.87
SIRPB3P-201ENST00000340424 INSP01308 110 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 HBE1P02100 147 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 SPART-AS1P0CW21 52 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 RAB5CP51148 216 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 FXYD7P58549 80 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 MIC13Q5XKP0 118 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 RPL7L1Q6DKI1 246 aaKnown RBP9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 Q6ZTC4 211 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 OR8A1Q8NGG7 326 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 ZNF331Q9NQX6 463 aaPredicted RBP9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 KCNIP2Q9NS61 270 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 SLC39A9Q9NUM3 307 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 VPS13DQ5THJ4 4388 aa9.59□□□□□ -0.87
SIRPB3P-201ENST00000340424 IGHV3OR16-12A0A075B7B8 117 aa9.58□□□□□ -0.88
SIRPB3P-201ENST00000340424 ZNF253O75346 499 aa9.58□□□□□ -0.88
SIRPB3P-201ENST00000340424 IGLC2P0DOY2 106 aa9.58□□□□□ -0.88
SIRPB3P-201ENST00000340424 FGF7P21781 194 aa9.58□□□□□ -0.88
SIRPB3P-201ENST00000340424 RRN3P1Q2M238 152 aa9.58□□□□□ -0.88
SIRPB3P-201ENST00000340424 IGFL4Q6B9Z1 124 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms