RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 MPC2O95563 127 aa13.69□□□□□ -0.22
ITGA4-202ENST00000339307 CAV2P51636 162 aa13.69□□□□□ -0.22
ITGA4-202ENST00000339307 C10orf113Q5VZT2 155 aa13.69□□□□□ -0.22
ITGA4-202ENST00000339307 C16orf74Q96GX8 76 aa13.69□□□□□ -0.22
ITGA4-202ENST00000339307 MGST2Q99735 147 aa13.69□□□□□ -0.22
ITGA4-202ENST00000339307 SLC50A1Q9BRV3 221 aa13.69□□□□□ -0.22
ITGA4-202ENST00000339307 ZNF331Q9NQX6 463 aaPredicted RBP13.69□□□□□ -0.22
ITGA4-202ENST00000339307 TIMM8BQ9Y5J9 83 aaPredicted RBP13.69□□□□□ -0.22
ITGA4-202ENST00000339307 PLAC8L1A1L4L8 177 aa13.68□□□□□ -0.22
ITGA4-202ENST00000339307 J3KRW8 73 aa13.68□□□□□ -0.22
ITGA4-202ENST00000339307 MED14OSP0DP75 135 aa13.68□□□□□ -0.22
ITGA4-202ENST00000339307 CXCL2P19875 107 aa13.68□□□□□ -0.22
ITGA4-202ENST00000339307 RAB31Q13636 194 aa13.68□□□□□ -0.22
ITGA4-202ENST00000339307 OR10J6PQ8NGY7 276 aa13.68□□□□□ -0.22
ITGA4-202ENST00000339307 PARD6GQ9BYG4 376 aaPredicted RBP13.68□□□□□ -0.22
ITGA4-202ENST00000339307 SLC25A31Q9H0C2 315 aa13.68□□□□□ -0.22
ITGA4-202ENST00000339307 NOP10Q9NPE3 64 aaKnown RBP13.68□□□□□ -0.22
ITGA4-202ENST00000339307 CBY3A6NI87 242 aa13.67□□□□□ -0.22
ITGA4-202ENST00000339307 MRPS12O15235 138 aaKnown RBP13.67□□□□□ -0.22
ITGA4-202ENST00000339307 LRRC37A5PQ49AS3 106 aa13.67□□□□□ -0.22
ITGA4-202ENST00000339307 Q6ZNX1 250 aa13.67□□□□□ -0.22
ITGA4-202ENST00000339307 Q6ZRG5 221 aa13.67□□□□□ -0.22
ITGA4-202ENST00000339307 STX12Q86Y82 276 aa13.67□□□□□ -0.22
ITGA4-202ENST00000339307 CST7O76096 145 aa13.66□□□□□ -0.22
ITGA4-202ENST00000339307 CAMLGP49069 296 aa13.66□□□□□ -0.22
ITGA4-202ENST00000339307 SULT1A1P50225 295 aa13.66□□□□□ -0.22
ITGA4-202ENST00000339307 OPCMLQ14982 345 aa13.66□□□□□ -0.22
ITGA4-202ENST00000339307 MORN5Q5VZ52 161 aa13.66□□□□□ -0.22
ITGA4-202ENST00000339307 CCDC28AQ8IWP9 274 aa13.66□□□□□ -0.22
ITGA4-202ENST00000339307 TMEM252Q8N6L7 170 aa13.66□□□□□ -0.22
ITGA4-202ENST00000339307 TMEM37Q8WXS4 190 aa13.66□□□□□ -0.22
ITGA4-202ENST00000339307 NACAE9PAV3 2078 aa13.66□□□□□ -0.22
ITGA4-202ENST00000339307 H0YIZ8 118 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 SLC17A3O00476 420 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 S100A11P31949 105 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 CCL18P55774 89 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 FAM3BP58499 235 aaPredicted RBP13.65□□□□□ -0.22
ITGA4-202ENST00000339307 HBG1P69891 147 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 HBG2P69892 147 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 BAXQ07812 192 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 CLINT1Q14677 625 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 THAP6Q8TBB0 222 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 DNAJC4Q9NNZ3 241 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 OR5AC2Q9NZP5 309 aa13.65□□□□□ -0.22
ITGA4-202ENST00000339307 FAM24AA6NFZ4 105 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 PRAC2D3DTV9 90 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 H7BYZ3 331 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 OR5I1Q13606 314 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 KIR3DS1Q14943 382 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 ATP6V1FQ16864 119 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 MIC13Q5XKP0 118 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 TMEM263Q8WUH6 116 aaKnown RBP13.64□□□□□ -0.23
ITGA4-202ENST00000339307 PXMP4Q9Y6I8 212 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 TRAV5A0A0B4J249 113 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 ZNF493Q6ZR52 646 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 UQCC1Q9NVA1 299 aa13.64□□□□□ -0.23
ITGA4-202ENST00000339307 DNAH2Q9P225 4427 aa13.63□□□□□ -0.23
ITGA4-202ENST00000339307 H3BQ15 152 aa13.63□□□□□ -0.23
ITGA4-202ENST00000339307 ZNF575Q86XF7 245 aa13.63□□□□□ -0.23
ITGA4-202ENST00000339307 OR1L4Q8NGR5 311 aa13.63□□□□□ -0.23
ITGA4-202ENST00000339307 RNASE8Q8TDE3 154 aaKnown RBP13.63□□□□□ -0.23
ITGA4-202ENST00000339307 RNF141Q8WVD5 230 aa13.63□□□□□ -0.23
ITGA4-202ENST00000339307 MBD2Q9UBB5 411 aa13.63□□□□□ -0.23
ITGA4-202ENST00000339307 FAT2Q9NYQ8 4349 aa13.62□□□□□ -0.23
ITGA4-202ENST00000339307 IGSF23A1L1A6 192 aa13.62□□□□□ -0.23
ITGA4-202ENST00000339307 SNURFLB1AK76 121 aa13.62□□□□□ -0.23
ITGA4-202ENST00000339307 GFI1BQ5VTD9 330 aa13.62□□□□□ -0.23
ITGA4-202ENST00000339307 C20orf144Q9BQM9 153 aa13.62□□□□□ -0.23
ITGA4-202ENST00000339307 TRAV12-3A0A0B4J271 114 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 NBDYA0A0U1RRE5 68 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 UBE2L5PA0A1B0GUS4 154 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 GAGE12BA1L429 117 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 GAGE7O76087 117 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 GAGE12FP0CL80 117 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 GAGE12GP0CL81 117 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 GAGE12IP0CL82 117 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 IGLC2P0DOY2 106 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 VWC2Q2TAL6 325 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 PFDN5Q99471 154 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 LINC00588Q9Y4M8 146 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 PCLOQ9Y6V0 5065 aa13.61□□□□□ -0.23
ITGA4-202ENST00000339307 A0A0J9YY99 117 aa13.6□□□□□ -0.23
ITGA4-202ENST00000339307 LEPP41159 167 aa13.6□□□□□ -0.23
ITGA4-202ENST00000339307 GUK1Q16774 197 aa13.6□□□□□ -0.23
ITGA4-202ENST00000339307 SSX7Q7RTT5 188 aa13.6□□□□□ -0.23
ITGA4-202ENST00000339307 OR2T35Q8NGX2 323 aa13.6□□□□□ -0.23
ITGA4-202ENST00000339307 ZNRF2Q8NHG8 242 aa13.6□□□□□ -0.23
ITGA4-202ENST00000339307 CHAC2Q8WUX2 184 aa13.6□□□□□ -0.23
ITGA4-202ENST00000339307 GNPNAT1Q96EK6 184 aaPredicted RBP13.6□□□□□ -0.23
ITGA4-202ENST00000339307 SAT2Q96F10 170 aaPredicted RBP13.6□□□□□ -0.23
ITGA4-202ENST00000339307 TRAV26-1A0A087WT03 109 aa13.59□□□□□ -0.23
ITGA4-202ENST00000339307 CT45A10P0DMU9 189 aa13.59□□□□□ -0.23
ITGA4-202ENST00000339307 RPL12P30050 165 aaKnown RBP13.59□□□□□ -0.23
ITGA4-202ENST00000339307 SLC39A9Q9NUM3 307 aa13.59□□□□□ -0.23
ITGA4-202ENST00000339307 WDR83OSQ9Y284 106 aa13.59□□□□□ -0.23
ITGA4-202ENST00000339307 DNAH17Q9UFH2 4485 aa13.59□□□□□ -0.23
ITGA4-202ENST00000339307 TNP2Q05952 138 aa13.58□□□□□ -0.24
ITGA4-202ENST00000339307 C6orf223Q8N319 242 aa13.58□□□□□ -0.24
ITGA4-202ENST00000339307 ZNF586Q9NXT0 402 aa13.58□□□□□ -0.24
ITGA4-202ENST00000339307 HSPB11Q9Y547 144 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms