RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ZFAND6Q6FIF0 208 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 C9JAW5 83 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 CMC4P56277 68 aaPredicted RBP8.58□□□□□ -1.04
CLN8-201ENST00000331222 UBE2BP63146 152 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 C1QTNF4Q9BXJ3 329 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 CD5LO43866 347 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 UBE2E1P51965 193 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 RPL18AQ02543 176 aaKnown RBP8.58□□□□□ -1.04
CLN8-201ENST00000331222 TCF15Q12870 199 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 TMEM170AQ8WVE7 144 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 PLSCR4Q9NRQ2 329 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 LINC00473A8K010 186 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 CXCL1P09341 107 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 PRSS57Q6UWY2 283 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 FBLIM1Q8WUP2 373 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 SPOCK3Q9BQ16 436 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 NTF4P34130 210 aa8.58□□□□□ -1.04
CLN8-201ENST00000331222 H3BMM0 161 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 TNFSF13O75888 250 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 DEFB136Q30KP8 78 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 GLRX5Q86SX6 157 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 UBE2WQ96B02 151 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 GTSF1LQ9H1H1 148 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 SIPA1L1O43166 1804 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 NLRC5Q86WI3 1866 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 LAIR2Q6ISS4 152 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 PLXNA4Q9HCM2 1894 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 CHCHD1Q96BP2 118 aaKnown RBP8.57□□□□□ -1.04
CLN8-201ENST00000331222 UTRNP46939 3433 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 A0A1B0GWJ7 208 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 TCTEX1D4Q5JR98 221 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 ZNRF2Q8NHG8 242 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 LIME1Q9H400 295 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 ESM1Q9NQ30 184 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 OSTCQ9NRP0 149 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 TNRC6BQ9UPQ9 1833 aaKnown RBP8.57□□□□□ -1.04
CLN8-201ENST00000331222 MINOS1Q5TGZ0 78 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 STPG4Q8N801 248 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 SCRT2Q9NQ03 307 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 MINOS1-NBL1R4GNA1 71 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 FAM223BA6NKX1 122 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 MORN5Q5VZ52 161 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 FAM223AQ8IWN6 122 aa8.57□□□□□ -1.04
CLN8-201ENST00000331222 TRBV25-1A0A075B6N4 114 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 LINC00271P0C7V0 271 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 NR2C2APQ86WQ0 139 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 IGHV4-28A0A0C4DH34 117 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 CR1LQ2VPA4 569 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 TMEM242Q9NWH2 141 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 NCOA6Q14686 2063 aaPredicted RBP8.56□□□□□ -1.04
CLN8-201ENST00000331222 ARMS2P0C7Q2 107 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 WNK1Q9H4A3 2382 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 HEPN1Q6WQI6 88 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 TMEM256Q8N2U0 113 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 RPP25LQ8N5L8 163 aaKnown RBP8.56□□□□□ -1.04
CLN8-201ENST00000331222 USMG5Q96IX5 58 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 FREM1Q5H8C1 2179 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 E9PQ18 207 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 PPBPP02775 128 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 SLC25A16P16260 332 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 GAGE2BQ13066 116 aa8.56□□□□□ -1.04
CLN8-201ENST00000331222 DUX4L9Q6RFH8 374 aaPredicted RBP8.56□□□□□ -1.04
CLN8-201ENST00000331222 ZNF106Q9H2Y7 1883 aaKnown RBP8.56□□□□□ -1.04
CLN8-201ENST00000331222 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 VWC2Q2TAL6 325 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 PLEKHB2Q96CS7 222 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 AGMATQ9BSE5 352 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 TMEM213A2RRL7 107 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 KLF5Q13887 457 aaPredicted RBP8.55□□□□□ -1.04
CLN8-201ENST00000331222 FAM120AOSQ5T036 256 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 DAZ1Q9NQZ3 744 aaKnown RBP8.55□□□□□ -1.04
CLN8-201ENST00000331222 XCL1P47992 114 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HAMPP81172 84 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 LINC00114Q6XXX2 140 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 TIMM17AQ99595 171 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 IGKV1D-17A0A075B6S4 117 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 TINCRA0A1B0GVN0 87 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 APOC4P55056 127 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 MYMXA0A1B0GTQ4 84 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST1H2BKO60814 126 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST1H2BJP06899 126 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST1H2BOP23527 126 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST1H2BBP33778 126 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST1H2BDP58876 126 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST1H2BCP62807 126 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST2H2BEQ16778 126 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.55□□□□□ -1.04
CLN8-201ENST00000331222 TEX36Q5VZQ5 186 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST1H2BHQ93079 126 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST1H2BNQ99877 126 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 HIST1H2BMQ99879 126 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 TP53TG1Q9Y2A0 90 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 H0YIZ8 118 aa8.55□□□□□ -1.04
CLN8-201ENST00000331222 NTN3O00634 580 aaPredicted RBP8.55□□□□□ -1.04
CLN8-201ENST00000331222 A0A087WWC5 75 aa8.54□□□□□ -1.04
CLN8-201ENST00000331222 M0R1W7 72 aa8.54□□□□□ -1.04
CLN8-201ENST00000331222 SPINK8P0C7L1 97 aa8.54□□□□□ -1.04
CLN8-201ENST00000331222 SPRY2O43597 315 aa8.54□□□□□ -1.04
CLN8-201ENST00000331222 NOP10Q9NPE3 64 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms