RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 OR4A5Q8NH83 315 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 C1RLQ9NZP8 487 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 DKK4Q9UBT3 224 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 SOX21Q9Y651 276 aaPredicted RBP6.26□□□□□ -1.41
VMA21-201ENST00000330374 LINC00312Q9Y6C7 94 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 SVEP1Q4LDE5 3571 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 ARHGAP32A7KAX9 2087 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 PLP1P60201 277 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 SIGLEC8Q9NYZ4 499 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 ZNF492Q9P255 531 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 C9orf118A6NHY6 69 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 K7ERJ3 54 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 S100A7AQ86SG5 101 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 RNF183Q96D59 192 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 PRELID3AQ96N28 172 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 SLC25A39Q9BZJ4 359 aaPredicted RBP6.26□□□□□ -1.41
VMA21-201ENST00000330374 TMEM133Q9H2Q1 129 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 DKK2Q9UBU2 259 aa6.26□□□□□ -1.41
VMA21-201ENST00000330374 IGHV3OR16-8A0A075B7F1 116 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 IGLV2-23P01705 113 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 SEC11AP67812 179 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 LYZL1Q6UWQ5 148 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 SEM1Q6ZVN7 128 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 C8orf46Q8TAG6 207 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 PAX2Q02962 417 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 DEFB109BQ30KR1 87 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 IGFL4Q6B9Z1 124 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 ZNF414Q96IQ9 312 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 RASL11BQ9BPW5 248 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 FBXL15Q9H469 300 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 TM4SF5O14894 197 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 IGHG3P01860 377 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 COX7A1P24310 79 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 OTORQ9NRC9 128 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 PSG8Q9UQ74 426 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 NPIPB5A8MRT5 1133 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 FCN3O75636 299 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 IGLV2-11P01706 119 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 CT45A10P0DMU9 189 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 KLF17Q5JT82 389 aaPredicted RBP6.25□□□□□ -1.41
VMA21-201ENST00000330374 UBALD2Q8IYN6 164 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 GFRA4Q9GZZ7 299 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 LRBAP50851 2863 aa6.25□□□□□ -1.41
VMA21-201ENST00000330374 K7EP34 96 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 CNIH1O95406 144 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 FGF6P10767 208 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 FCGR2BP31994 310 aaPredicted RBP6.24□□□□□ -1.41
VMA21-201ENST00000330374 GTSF1LQ9H1H1 148 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 A0A096LNJ9 63 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 CRIP1P50238 77 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 BCL6BQ8N143 479 aaPredicted RBP6.24□□□□□ -1.41
VMA21-201ENST00000330374 TRGV9Q99603 122 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 NDUFB3O43676 98 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 CD59P13987 128 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 CKS2P33552 79 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 RPS20P60866 119 aaKnown RBP6.24□□□□□ -1.41
VMA21-201ENST00000330374 AKAP6Q13023 2319 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 TWIST1Q15672 202 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 SIGLEC15Q6ZMC9 328 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 IGHV3-35A0A0C4DH35 117 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 H3BRM9 83 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 EVI2AP22794 236 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 PPIFP30405 207 aaKnown RBP6.24□□□□□ -1.41
VMA21-201ENST00000330374 Q8TAT8 98 aa6.24□□□□□ -1.41
VMA21-201ENST00000330374 TRAV17A0A0B4J275 112 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 IL4P05112 153 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 SMAGPQ0VAQ4 97 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 C19orf54Q5BKX5 351 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 UFSP1Q6NVU6 142 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 CLEC2AQ6UVW9 174 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 IFI27L1Q96BM0 104 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 RAXQ9Y2V3 346 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 INSIG2Q9Y5U4 225 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 IGKV2-40A0A087WW87 121 aaPredicted RBP6.23□□□□□ -1.41
VMA21-201ENST00000330374 TMEM189A5PLL7 270 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 G3V4G9 280 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 IGKV2D-40P01614 121 aaPredicted RBP6.23□□□□□ -1.41
VMA21-201ENST00000330374 IGHV3-23P01764 117 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 PRSS1P07477 247 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 FABP2P12104 132 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 IGLV3-9A0A075B6K5 115 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 CIDEAO60543 219 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 FCER1GP30273 86 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 HSD52Q0P140 79 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 TMEM75Q8N9X5 138 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 TMEM186Q96B77 213 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 AGRNO00468 2067 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 PPIAL4EA0A075B759 164 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 TEX48A0A1B0GUV7 120 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 A0A1W2PPM0 123 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 NPIPB6E9PJ23 425 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 NPYP01303 97 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 PPIAL4FP0DN26 164 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 GATA4P43694 442 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 ORMDL3Q8N138 153 aa6.23□□□□□ -1.41
VMA21-201ENST00000330374 GAS8-AS1O95177 125 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 FXYD2P54710 66 aa6.22□□□□□ -1.41
VMA21-201ENST00000330374 MRPL51Q4U2R6 128 aaKnown RBP6.22□□□□□ -1.41
VMA21-201ENST00000330374 NHP2Q9NX24 153 aaKnown RBP6.22□□□□□ -1.41
VMA21-201ENST00000330374 MSRB1Q9NZV6 116 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms