RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SMIM9A6NGZ8 99 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 ZNF705FA8MVS1 300 aaPredicted RBP10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 COX7A2P2O60397 106 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 NUDT3O95989 172 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 ZNF705DP0CH99 300 aaPredicted RBP10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 ZNF705BP0CI00 300 aaPredicted RBP10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 CAMLGP49069 296 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 LRRC37A5PQ49AS3 106 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 SPATA31B1PQ5VZV4 182 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 EBLN2Q6P2I7 272 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 TMEM182Q6ZP80 229 aaPredicted RBP10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 SSX7Q7RTT5 188 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 SHANK2-AS3Q9BTD1 123 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 SLC25A32Q9H2D1 315 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 RFNGQ9Y644 331 aa10.26□□□□□ -0.77
CTHRC1-201ENST00000330295 A0A1W2PPQ1 181 aa10.25□□□□□ -0.77
CTHRC1-201ENST00000330295 MPDU1O75352 247 aa10.25□□□□□ -0.77
CTHRC1-201ENST00000330295 BAXQ07812 192 aa10.25□□□□□ -0.77
CTHRC1-201ENST00000330295 OR1L4Q8NGR5 311 aa10.25□□□□□ -0.77
CTHRC1-201ENST00000330295 LRRC20Q8TCA0 184 aa10.25□□□□□ -0.77
CTHRC1-201ENST00000330295 ARV1Q9H2C2 271 aa10.25□□□□□ -0.77
CTHRC1-201ENST00000330295 C11orf1Q9H5F2 150 aa10.25□□□□□ -0.77
CTHRC1-201ENST00000330295 RPRMQ9NS64 109 aa10.25□□□□□ -0.77
CTHRC1-201ENST00000330295 IGSF23A1L1A6 192 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 H3BRN7 92 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 PLA2G1BP04054 148 aaKnown RBP10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 ERVFC1-1P60608 527 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 DAD1P61803 113 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 FGL1Q08830 312 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 C10orf113Q5VZT2 155 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 FOXI2Q6ZQN5 318 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 Q6ZRN7 208 aaPredicted RBP10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 PPP1R1CQ8WVI7 109 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 PFDN5Q99471 154 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 KRTAP9-2Q9BYQ4 174 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 DNAJC4Q9NNZ3 241 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 WDR83OSQ9Y284 106 aa10.24□□□□□ -0.77
CTHRC1-201ENST00000330295 UBE2L5PA0A1B0GUS4 154 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 OXTP01178 125 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 HLA-DRB4P13762 266 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 FGF7P21781 194 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 VWC2Q2TAL6 325 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 LINC00305Q7Z4B0 112 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 ZNF709Q8N972 641 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 MGST2Q99735 147 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 KCNIP2Q9NS61 270 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 FAT3Q8TDW7 4589 aa10.23□□□□□ -0.77
CTHRC1-201ENST00000330295 LRP2P98164 4655 aa10.22□□□□□ -0.77
CTHRC1-201ENST00000330295 H3BMM0 161 aa10.22□□□□□ -0.77
CTHRC1-201ENST00000330295 RPL29P47914 159 aaKnown RBP10.22□□□□□ -0.77
CTHRC1-201ENST00000330295 H2BFSP57053 126 aa10.22□□□□□ -0.77
CTHRC1-201ENST00000330295 LINC00315P59091 139 aa10.22□□□□□ -0.77
CTHRC1-201ENST00000330295 BPIFA4PQ86YQ2 179 aa10.22□□□□□ -0.77
CTHRC1-201ENST00000330295 CHAC2Q8WUX2 184 aa10.22□□□□□ -0.77
CTHRC1-201ENST00000330295 UHRF2Q96PU4 802 aa10.22□□□□□ -0.77
CTHRC1-201ENST00000330295 MED28Q9H204 178 aa10.22□□□□□ -0.77
CTHRC1-201ENST00000330295 IGHV3OR16-12A0A075B7B8 117 aa10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 SOCS3O14543 225 aa10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 GCSHP23434 173 aa10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 B2MP61769 119 aa10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 CLINT1Q14677 625 aa10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 OR4B1Q8NGF8 309 aa10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 OR5C1Q8NGR4 320 aa10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 SAV1Q9H4B6 383 aaPredicted RBP10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 ZNF586Q9NXT0 402 aa10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 OR5AC2Q9NZP5 309 aa10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 YTHDF2Q9Y5A9 579 aaKnown RBP10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 ALG5Q9Y673 324 aa10.21□□□□□ -0.77
CTHRC1-201ENST00000330295 C17orf112F2Z3M2 114 aa10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 DUSP14O95147 198 aaKnown RBP10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 MPC2O95563 127 aa10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 CXCL2P19875 107 aa10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 NHLH2Q02577 135 aa10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 MIC13Q5XKP0 118 aa10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 PATE2Q6UY27 113 aa10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 THAP6Q8TBB0 222 aa10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 CLUHP3Q96NS8 147 aa10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 SLC39A9Q9NUM3 307 aa10.2□□□□□ -0.78
CTHRC1-201ENST00000330295 A0A087X0K7 114 aa10.19□□□□□ -0.78
CTHRC1-201ENST00000330295 KRTAP9-6A0A140TA67 174 aa10.19□□□□□ -0.78
CTHRC1-201ENST00000330295 IGKV3-20P01619 116 aa10.19□□□□□ -0.78
CTHRC1-201ENST00000330295 OPCMLQ14982 345 aa10.19□□□□□ -0.78
CTHRC1-201ENST00000330295 RGS21Q2M5E4 152 aa10.19□□□□□ -0.78
CTHRC1-201ENST00000330295 LCN15Q6UWW0 184 aa10.19□□□□□ -0.78
CTHRC1-201ENST00000330295 ZNF738Q8NE65 137 aa10.19□□□□□ -0.78
CTHRC1-201ENST00000330295 SCGB1C1Q8TD33 95 aa10.19□□□□□ -0.78
CTHRC1-201ENST00000330295 TMEM70Q9BUB7 260 aa10.19□□□□□ -0.78
CTHRC1-201ENST00000330295 PXMP4Q9Y6I8 212 aa10.19□□□□□ -0.78
CTHRC1-201ENST00000330295 A0A0J9YX75 114 aa10.18□□□□□ -0.78
CTHRC1-201ENST00000330295 H0YIZ8 118 aa10.18□□□□□ -0.78
CTHRC1-201ENST00000330295 RPL12P30050 165 aaKnown RBP10.18□□□□□ -0.78
CTHRC1-201ENST00000330295 PSG9Q00887 426 aa10.18□□□□□ -0.78
CTHRC1-201ENST00000330295 GUK1Q16774 197 aa10.18□□□□□ -0.78
CTHRC1-201ENST00000330295 FAM78BQ5VT40 261 aa10.18□□□□□ -0.78
CTHRC1-201ENST00000330295 ASB13Q8WXK3 278 aa10.18□□□□□ -0.78
CTHRC1-201ENST00000330295 TMEM37Q8WXS4 190 aa10.18□□□□□ -0.78
CTHRC1-201ENST00000330295 SLC50A1Q9BRV3 221 aa10.18□□□□□ -0.78
CTHRC1-201ENST00000330295 NPCDR1Q9BY65 106 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms