RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 PSG8Q9UQ74 426 aa12.59□□□□□ -0.39
USHBP1-202ENST00000324554 PSG3Q16557 428 aa12.58□□□□□ -0.4
USHBP1-202ENST00000324554 VMO1Q7Z5L0 202 aa12.58□□□□□ -0.4
USHBP1-202ENST00000324554 ORAOV1Q8WV07 137 aa12.58□□□□□ -0.4
USHBP1-202ENST00000324554 ZNF48Q96MX3 618 aaPredicted RBP12.58□□□□□ -0.4
USHBP1-202ENST00000324554 NCBP2LA6PVI3 153 aaKnown RBP12.58□□□□□ -0.4
USHBP1-202ENST00000324554 K7EQM0 130 aa12.58□□□□□ -0.4
USHBP1-202ENST00000324554 MFAP4P55083 255 aa12.58□□□□□ -0.4
USHBP1-202ENST00000324554 WNK2Q9Y3S1 2297 aa12.58□□□□□ -0.4
USHBP1-202ENST00000324554 CCL25O15444 150 aa12.57□□□□□ -0.4
USHBP1-202ENST00000324554 CCDC144NLQ6NUI1 221 aa12.57□□□□□ -0.4
USHBP1-202ENST00000324554 TTC9CQ8N5M4 171 aa12.57□□□□□ -0.4
USHBP1-202ENST00000324554 Q8N6K4 173 aa12.57□□□□□ -0.4
USHBP1-202ENST00000324554 ST20Q9HBF5 79 aa12.57□□□□□ -0.4
USHBP1-202ENST00000324554 DOPEY1Q5JWR5 2465 aa12.57□□□□□ -0.4
USHBP1-202ENST00000324554 C1orf122Q6ZSJ8 110 aa12.57□□□□□ -0.4
USHBP1-202ENST00000324554 C8orf49Q96NF6 230 aa12.57□□□□□ -0.4
USHBP1-202ENST00000324554 COX11Q9Y6N1 276 aa12.57□□□□□ -0.4
USHBP1-202ENST00000324554 H0Y8G0 127 aa12.56□□□□□ -0.4
USHBP1-202ENST00000324554 ZFP36P26651 326 aaKnown RBP12.56□□□□□ -0.4
USHBP1-202ENST00000324554 TPPP3Q9BW30 176 aa12.56□□□□□ -0.4
USHBP1-202ENST00000324554 TIMM8BQ9Y5J9 83 aaPredicted RBP12.56□□□□□ -0.4
USHBP1-202ENST00000324554 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
USHBP1-202ENST00000324554 FAM208BQ5VWN6 2430 aa12.56□□□□□ -0.4
USHBP1-202ENST00000324554 OR5AL1P0C617 328 aa12.56□□□□□ -0.4
USHBP1-202ENST00000324554 PDE6HQ13956 83 aa12.56□□□□□ -0.4
USHBP1-202ENST00000324554 PMCHL2Q9BQD1 86 aa12.56□□□□□ -0.4
USHBP1-202ENST00000324554 MAP1LC3CQ9BXW4 147 aa12.56□□□□□ -0.4
USHBP1-202ENST00000324554 C21orf62Q9NYP8 219 aa12.56□□□□□ -0.4
USHBP1-202ENST00000324554 MPV17L2Q567V2 206 aa12.55□□□□□ -0.4
USHBP1-202ENST00000324554 S100A7AQ86SG5 101 aa12.55□□□□□ -0.4
USHBP1-202ENST00000324554 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
USHBP1-202ENST00000324554 CELSR2Q9HCU4 2923 aa12.55□□□□□ -0.4
USHBP1-202ENST00000324554 IGHV3-23P01764 117 aa12.54□□□□□ -0.4
USHBP1-202ENST00000324554 RIGQ13278 110 aa12.54□□□□□ -0.4
USHBP1-202ENST00000324554 EBI3Q14213 229 aa12.54□□□□□ -0.4
USHBP1-202ENST00000324554 GATD1Q8NB37 220 aa12.54□□□□□ -0.4
USHBP1-202ENST00000324554 CENPEQ02224 2701 aa12.54□□□□□ -0.4
USHBP1-202ENST00000324554 OOSP1A8MZH6 123 aa12.54□□□□□ -0.4
USHBP1-202ENST00000324554 MINOS1Q5TGZ0 78 aa12.54□□□□□ -0.4
USHBP1-202ENST00000324554 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
USHBP1-202ENST00000324554 MINOS1-NBL1R4GNA1 71 aa12.54□□□□□ -0.4
USHBP1-202ENST00000324554 PTTG1IPP53801 180 aa12.53□□□□□ -0.4
USHBP1-202ENST00000324554 PET117Q6UWS5 81 aa12.53□□□□□ -0.4
USHBP1-202ENST00000324554 ZNF843Q8N446 348 aa12.53□□□□□ -0.4
USHBP1-202ENST00000324554 ZNF738Q8NE65 137 aa12.53□□□□□ -0.4
USHBP1-202ENST00000324554 THYN1Q9P016 225 aa12.53□□□□□ -0.4
USHBP1-202ENST00000324554 TMEM11P17152 192 aa12.53□□□□□ -0.4
USHBP1-202ENST00000324554 AP5S1Q9NUS5 200 aa12.53□□□□□ -0.4
USHBP1-202ENST00000324554 PPP1R14DQ9NXH3 145 aa12.53□□□□□ -0.4
USHBP1-202ENST00000324554 HSPB8Q9UJY1 196 aa12.53□□□□□ -0.4
USHBP1-202ENST00000324554 OR2T8A6NH00 312 aa12.52□□□□□ -0.4
USHBP1-202ENST00000324554 FAM106CPP0CH98 169 aa12.52□□□□□ -0.4
USHBP1-202ENST00000324554 EGR2P11161 476 aaPredicted RBP12.52□□□□□ -0.4
USHBP1-202ENST00000324554 FAM106AQ4KMX7 169 aa12.52□□□□□ -0.4
USHBP1-202ENST00000324554 SCRT2Q9NQ03 307 aa12.52□□□□□ -0.4
USHBP1-202ENST00000324554 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.41
USHBP1-202ENST00000324554 IGHV7-81A0A0B4J1V7 117 aa12.52□□□□□ -0.41
USHBP1-202ENST00000324554 SLC25A34Q6PIV7 304 aa12.52□□□□□ -0.41
USHBP1-202ENST00000324554 NRGNQ92686 78 aa12.52□□□□□ -0.41
USHBP1-202ENST00000324554 SIRPDQ9H106 197 aa12.52□□□□□ -0.41
USHBP1-202ENST00000324554 LRRK2Q5S007 2527 aa12.52□□□□□ -0.41
USHBP1-202ENST00000324554 ZFHX3Q15911 3703 aa12.52□□□□□ -0.41
USHBP1-202ENST00000324554 A1L4Q6 167 aa12.51□□□□□ -0.41
USHBP1-202ENST00000324554 CTSGP08311 255 aa12.51□□□□□ -0.41
USHBP1-202ENST00000324554 LINC01545Q5VT33 79 aa12.51□□□□□ -0.41
USHBP1-202ENST00000324554 TMEM213A2RRL7 107 aa12.51□□□□□ -0.41
USHBP1-202ENST00000324554 NCR2O95944 276 aa12.51□□□□□ -0.41
USHBP1-202ENST00000324554 CT45A10P0DMU9 189 aa12.51□□□□□ -0.41
USHBP1-202ENST00000324554 UBE2V1Q13404 147 aa12.51□□□□□ -0.41
USHBP1-202ENST00000324554 ZNF747Q9BV97 191 aa12.51□□□□□ -0.41
USHBP1-202ENST00000324554 BPESC1Q9GZL8 116 aa12.51□□□□□ -0.41
USHBP1-202ENST00000324554 HSBP1L1C9JCN9 74 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 NUDT3O95989 172 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 EFNA4P52798 201 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 PSG9Q00887 426 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 LOXL1Q08397 574 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-202ENST00000324554 LYZL1Q6UWQ5 148 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 Q8N9W7 124 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 PRSS3P2Q8NHM4 247 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 IGKV2-40A0A087WW87 121 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-202ENST00000324554 A0A1B0GW15 77 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 SERTM2A0A1B0GWG4 89 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 IGKV2D-40P01614 121 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-202ENST00000324554 RPL7P18124 248 aaKnown RBP12.5□□□□□ -0.41
USHBP1-202ENST00000324554 IFI27P40305 119 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-202ENST00000324554 CSN1S1P47710 185 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 Q6AWC8 147 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 ZNF493Q6ZR52 646 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 ERASQ7Z444 233 aa12.5□□□□□ -0.41
USHBP1-202ENST00000324554 A0A096LNJ9 63 aa12.49□□□□□ -0.41
USHBP1-202ENST00000324554 MUC21A0A0G2JKD1 596 aa12.49□□□□□ -0.41
USHBP1-202ENST00000324554 MUC21A0A140T8X8 626 aa12.49□□□□□ -0.41
USHBP1-202ENST00000324554 SH2D1AO60880 128 aa12.49□□□□□ -0.41
USHBP1-202ENST00000324554 MUC21Q5SSG8 566 aa12.49□□□□□ -0.41
USHBP1-202ENST00000324554 BVES-AS1Q5T3Y7 98 aa12.49□□□□□ -0.41
USHBP1-202ENST00000324554 FA2HQ7L5A8 372 aa12.49□□□□□ -0.41
USHBP1-202ENST00000324554 D6R8Y8 96 aa12.49□□□□□ -0.41
USHBP1-202ENST00000324554 FOXE3Q13461 319 aa12.49□□□□□ -0.41
USHBP1-202ENST00000324554 LOC389332A0A1B0GUA5 103 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms