RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 GFRALQ6UXV0 394 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 NABP2Q9BQ15 211 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 AGRNO00468 2067 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 FAM90A18PA6NE21 464 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 FAM90A16PA6NEW6 464 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 FAM90A8PA6NJQ4 464 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 FAM90A9PA6NNJ1 464 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 NPFFO15130 113 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 SNCGO76070 127 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 FAM27E3Q08E93 113 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 CHAC1Q9BUX1 264 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 USP24Q9UPU5 2620 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 ZNF688P0C7X2 276 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 PYYP10082 97 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 BRWD1-AS2P59051 145 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 POU2AF1Q16633 256 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 PPP1R27Q86WC6 154 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 OR13A1Q8NGR1 328 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 RFESDQ8TAC1 157 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 PPDPFLQ8WWR9 84 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 ZNF503Q96F45 646 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 C1orf159Q96HA4 380 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 CHCHD5Q9BSY4 110 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 FBXL15Q9H469 300 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 MYO18BQ8IUG5 2567 aa8.23□□□□□ -1.09
SF3B2-201ENST00000322535 CSMD1Q96PZ7 3565 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 TRAV3A0A0B4J244 114 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 A0A1W2PPI3 338 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 TCRBV4S1A1TA0A5B7 111 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 NPIPB6E9PJ23 425 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.22□□□□□ -1.09
SF3B2-201ENST00000322535 J3KT08 172 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 FCGR3BO75015 233 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 SS18L1O75177 396 aaPredicted RBP8.22□□□□□ -1.09
SF3B2-201ENST00000322535 IGLC6P0CF74 106 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 PCBD1P61457 104 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 C4orf26Q17RF5 130 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 DUX4L9Q6RFH8 374 aaPredicted RBP8.22□□□□□ -1.09
SF3B2-201ENST00000322535 DKK2Q9UBU2 259 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 LINC00473A8K010 186 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
SF3B2-201ENST00000322535 HRCT1Q6UXD1 115 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 OR13C6PQ8NH95 151 aa8.22□□□□□ -1.09
SF3B2-201ENST00000322535 IGKV2D-26A0A0A0MRZ7 120 aa8.21□□□□□ -1.09
SF3B2-201ENST00000322535 A0A1B0GXF2 115 aa8.21□□□□□ -1.09
SF3B2-201ENST00000322535 PLAUP00749 431 aa8.21□□□□□ -1.09
SF3B2-201ENST00000322535 IFI27P40305 119 aaPredicted RBP8.21□□□□□ -1.09
SF3B2-201ENST00000322535 RBPMS2Q6ZRY4 209 aaKnown RBP8.21□□□□□ -1.09
SF3B2-201ENST00000322535 Q6ZSR3 168 aa8.21□□□□□ -1.09
SF3B2-201ENST00000322535 ZNF414Q96IQ9 312 aa8.21□□□□□ -1.09
SF3B2-201ENST00000322535 LINC00477Q96M19 166 aa8.21□□□□□ -1.09
SF3B2-201ENST00000322535 RASL11BQ9BPW5 248 aa8.21□□□□□ -1.09
SF3B2-201ENST00000322535 MORN5Q5VZ52 161 aa8.21□□□□□ -1.1
SF3B2-201ENST00000322535 Q6ZT83 130 aa8.21□□□□□ -1.1
SF3B2-201ENST00000322535 PRADC1Q9BSG0 188 aa8.21□□□□□ -1.1
SF3B2-201ENST00000322535 PROCRQ9UNN8 238 aa8.21□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A10PA6NDY2 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A20PA6NIJ5 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A7PA6NKC0 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A22PA8MWA6 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A12PA8MX19 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A5PA8MXJ8 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A23PA8MXZ1 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A15PP0C7V4 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A13PP0C7W8 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A14PP0C7W9 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 FAM90A24PP0C7X0 464 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 LINC00322Q6ZN03 302 aaPredicted RBP8.2□□□□□ -1.1
SF3B2-201ENST00000322535 LRRC75A-AS1Q8N1F1 130 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 SSUH2Q9Y2M2 353 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 TRGV8A0A0C4DH27 118 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 H3BTX0 84 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 H3BVH4 76 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 P01737 135 aa8.2□□□□□ -1.1
SF3B2-201ENST00000322535 ANKHD1Q8IWZ3 2542 aaKnown RBP8.2□□□□□ -1.1
SF3B2-201ENST00000322535 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 C15orf65H3BRN8 121 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 TFF1P04155 84 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 P0C879 139 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 MLANAQ16655 118 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 C12orf74Q32Q52 190 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 ATP5L2Q7Z4Y8 100 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 TNCP24821 2201 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 HRNRQ86YZ3 2850 aaPredicted RBP8.19□□□□□ -1.1
SF3B2-201ENST00000322535 A0A0G2JNJ9 132 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 PEX7O00628 323 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 RRN3P1Q2M238 152 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 MRAPQ8TCY5 172 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 FLYWCH2Q96CP2 140 aaKnown RBP8.19□□□□□ -1.1
SF3B2-201ENST00000322535 RPP21Q9H633 154 aaKnown RBP8.19□□□□□ -1.1
SF3B2-201ENST00000322535 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 Q9UFV3 132 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 TCF19Q9Y242 345 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 M0R1B8 84 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 PSMB2P49721 201 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 HERVK_113P63121 156 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 ZNF672Q499Z4 452 aaPredicted RBP8.19□□□□□ -1.1
SF3B2-201ENST00000322535 GTSCR1Q86UQ5 136 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 TEN1Q86WV5 123 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms