RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 LYPD2Q6UXB3 125 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 GTSCR1Q86UQ5 136 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 EVI2AP22794 236 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 LCNL1Q6ZST4 164 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 TMEM189A5PLL7 270 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 CRYGCP07315 174 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 FCER1GP30273 86 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 FAM104BQ5XKR9 115 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 IGFL4Q6B9Z1 124 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 ZNF474Q6S9Z5 364 aaPredicted RBP7.63□□□□□ -1.19
PTPRA-202ENST00000318266 Q8TAT8 98 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 IGFBPL1Q8WX77 278 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 NGBQ9NPG2 151 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 MSRB1Q9NZV6 116 aa7.63□□□□□ -1.19
PTPRA-202ENST00000318266 MALRD1Q5VYJ5 2156 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 K7EQM0 130 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 MRGPRG-AS1Q2M3A8 158 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 ETDBQ3ZM63 59 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 TMEM75Q8N9X5 138 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 CHAC1Q9BUX1 264 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 FBXL15Q9H469 300 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 TRBV19A0A075B6N1 114 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 IGKV2-40A0A087WW87 121 aaPredicted RBP7.62□□□□□ -1.19
PTPRA-202ENST00000318266 H3BMG7 143 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.62□□□□□ -1.19
PTPRA-202ENST00000318266 IGKV2D-40P01614 121 aaPredicted RBP7.62□□□□□ -1.19
PTPRA-202ENST00000318266 FAM27E3Q08E93 113 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 PLGLAQ15195 96 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 ARPC1AQ92747 370 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 SIGMAR1Q99720 223 aa7.62□□□□□ -1.19
PTPRA-202ENST00000318266 INS-IGF2F8WCM5 200 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 IGHG3P01860 377 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 IL4P05112 153 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 PPIFP30405 207 aaKnown RBP7.61□□□□□ -1.19
PTPRA-202ENST00000318266 SEM1Q6ZVN7 128 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 LINC00574Q9H8X3 128 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 IGLV3-9A0A075B6K5 115 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 IGHV3OR16-8A0A075B7F1 116 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 SPAARA0A1B0GVQ0 90 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 GATA1P15976 413 aaPredicted RBP7.61□□□□□ -1.19
PTPRA-202ENST00000318266 GATA4P43694 442 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 KLF17Q5JT82 389 aaPredicted RBP7.61□□□□□ -1.19
PTPRA-202ENST00000318266 C16orf54Q6UWD8 224 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 SIGLEC15Q6ZMC9 328 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 VGLL1Q99990 258 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 PKD1L2Q7Z442 2459 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 NPIPB5A8MRT5 1133 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 SH2D1AO60880 128 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 IGKV1-17P01599 117 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 LEPP41159 167 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 DPF1Q92782 380 aa7.61□□□□□ -1.19
PTPRA-202ENST00000318266 GAGE12HA6NDE8 117 aa7.6□□□□□ -1.19
PTPRA-202ENST00000318266 TNFRSF14Q92956 283 aa7.6□□□□□ -1.19
PTPRA-202ENST00000318266 FOXC2Q99958 501 aa7.6□□□□□ -1.19
PTPRA-202ENST00000318266 TMEM160Q9NX00 188 aa7.6□□□□□ -1.19
PTPRA-202ENST00000318266 AGRNO00468 2067 aa7.6□□□□□ -1.19
PTPRA-202ENST00000318266 WI2-2373I1.2A0A1W2PRP0 233 aa7.6□□□□□ -1.19
PTPRA-202ENST00000318266 INSL3P51460 131 aa7.6□□□□□ -1.19
PTPRA-202ENST00000318266 ZC2HC1BQ5TFG8 222 aa7.6□□□□□ -1.19
PTPRA-202ENST00000318266 ZNF843Q8N446 348 aa7.6□□□□□ -1.19
PTPRA-202ENST00000318266 TRBV25-1A0A075B6N4 114 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 CNIH1O95406 144 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 SMIM17P0DL12 118 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 ATP5G2Q06055 141 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 SFTA2Q6UW10 78 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 SIVA1O15304 175 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 NDUFB3O43676 98 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 COX7A1P24310 79 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 RAXQ9Y2V3 346 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 SIGLEC9Q9Y336 463 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 IGHV3-35A0A0C4DH35 117 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 EGR2P11161 476 aaPredicted RBP7.59□□□□□ -1.19
PTPRA-202ENST00000318266 HOXB4P17483 251 aaPredicted RBP7.59□□□□□ -1.19
PTPRA-202ENST00000318266 ZNF493Q6ZR52 646 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 PPP1R27Q86WC6 154 aa7.59□□□□□ -1.19
PTPRA-202ENST00000318266 MED13LQ71F56 2210 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 PIEZO2Q9H5I5 2752 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 SVEP1Q4LDE5 3571 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 A0A1B0GW15 77 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 C16orf97H3BN30 126 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 ORM1P02763 201 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 ZNF562Q6V9R5 426 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 ZNF479Q96JC4 524 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 CTSZQ9UBR2 303 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 CEP295Q9C0D2 2601 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 IGHV3-23P01764 117 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 MC5RP33032 325 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 ODF1Q14990 250 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 CD300EQ496F6 205 aaPredicted RBP7.58□□□□□ -1.2
PTPRA-202ENST00000318266 TEX36Q5VZQ5 186 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 Q6AWC8 147 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 SHANK2-AS3Q9BTD1 123 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 AAMDCQ9H7C9 122 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 TMEM14CQ9P0S9 112 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 HHLA3Q9XRX5 114 aa7.58□□□□□ -1.2
PTPRA-202ENST00000318266 TRAV40A0A0B4J280 105 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 TEX22C9J3V5 150 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 HLA-DMBP28068 263 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 ZNF80P51504 273 aaPredicted RBP7.57□□□□□ -1.2
PTPRA-202ENST00000318266 TMEM30BQ3MIR4 351 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms