RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 GTF2H5Q6ZYL4 71 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 TMEM116Q8NCL8 245 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 TIMD4Q96H15 378 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 TPPP3Q9BW30 176 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 HILPDAQ9Y5L2 63 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 H3BUT2 72 aa13.55□□□□□ -0.24
SCAMP4-201ENST00000316097 IGLV2-11P01706 119 aa13.55□□□□□ -0.24
SCAMP4-201ENST00000316097 CRYGCP07315 174 aa13.55□□□□□ -0.24
SCAMP4-201ENST00000316097 RIGQ13278 110 aa13.55□□□□□ -0.24
SCAMP4-201ENST00000316097 C8orf46Q8TAG6 207 aa13.55□□□□□ -0.24
SCAMP4-201ENST00000316097 OTORQ9NRC9 128 aa13.55□□□□□ -0.24
SCAMP4-201ENST00000316097 A0A1W2PRD5 423 aa13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 A0A1W2PRF3 423 aa13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 A0A1W2PRM7 423 aa13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 C9orf118A6NHY6 69 aa13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 LYZP61626 148 aa13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 LOXL1Q08397 574 aaPredicted RBP13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 ABCA1O95477 2261 aa13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 LOC389332A0A1B0GUA5 103 aa13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 IFI27P40305 119 aaPredicted RBP13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 VMA21Q3ZAQ7 101 aa13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 HIGD1AQ9Y241 93 aa13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 CELSR2Q9HCU4 2923 aa13.54□□□□□ -0.24
SCAMP4-201ENST00000316097 A6NDN8 102 aa13.53□□□□□ -0.24
SCAMP4-201ENST00000316097 TMEM238C9JI98 176 aa13.53□□□□□ -0.24
SCAMP4-201ENST00000316097 H3BRM9 83 aa13.53□□□□□ -0.24
SCAMP4-201ENST00000316097 C16orf54Q6UWD8 224 aa13.53□□□□□ -0.24
SCAMP4-201ENST00000316097 CELSR1Q9NYQ6 3014 aa13.53□□□□□ -0.24
SCAMP4-201ENST00000316097 CENPEQ02224 2701 aa13.53□□□□□ -0.24
SCAMP4-201ENST00000316097 ZNF785A8K8V0 405 aa13.53□□□□□ -0.24
SCAMP4-201ENST00000316097 ENSAO43768 121 aaKnown RBP13.53□□□□□ -0.24
SCAMP4-201ENST00000316097 PIP4P2Q8N4L2 257 aa13.53□□□□□ -0.24
SCAMP4-201ENST00000316097 FAM208BQ5VWN6 2430 aa13.53□□□□□ -0.24
SCAMP4-201ENST00000316097 ZFP36P26651 326 aaKnown RBP13.52□□□□□ -0.24
SCAMP4-201ENST00000316097 ZNF843Q8N446 348 aa13.52□□□□□ -0.24
SCAMP4-201ENST00000316097 RAB37Q96AX2 223 aa13.52□□□□□ -0.24
SCAMP4-201ENST00000316097 ZFHX3Q15911 3703 aa13.52□□□□□ -0.24
SCAMP4-201ENST00000316097 A0A096LNJ9 63 aa13.52□□□□□ -0.25
SCAMP4-201ENST00000316097 KIR3DS1Q14943 382 aa13.52□□□□□ -0.25
SCAMP4-201ENST00000316097 THYN1Q9P016 225 aa13.52□□□□□ -0.25
SCAMP4-201ENST00000316097 K7EP34 96 aa13.51□□□□□ -0.25
SCAMP4-201ENST00000316097 FXYD7P58549 80 aa13.51□□□□□ -0.25
SCAMP4-201ENST00000316097 KLRD1Q13241 179 aa13.51□□□□□ -0.25
SCAMP4-201ENST00000316097 MRGPRG-AS1Q2M3A8 158 aa13.51□□□□□ -0.25
SCAMP4-201ENST00000316097 TMEM186Q96B77 213 aa13.51□□□□□ -0.25
SCAMP4-201ENST00000316097 LRRK2Q5S007 2527 aa13.51□□□□□ -0.25
SCAMP4-201ENST00000316097 WNK2Q9Y3S1 2297 aa13.51□□□□□ -0.25
SCAMP4-201ENST00000316097 A0A0G2JLM5 398 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 CACNG7P62955 275 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 PAX2Q02962 417 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 NRGNQ92686 78 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 SLC25A39Q9BZJ4 359 aaPredicted RBP13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 SERTM2A0A1B0GWG4 89 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 G3V4G9 280 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 IGLV1-47P01700 117 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 RPL27AP46776 148 aaKnown RBP13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 PLP1P60201 277 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 BOD1L2Q8IYS8 172 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 LINC00311Q8N616 119 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 OR2K2Q8NGT1 345 aa13.5□□□□□ -0.25
SCAMP4-201ENST00000316097 A1L4Q6 167 aa13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 D6R8Y8 96 aa13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 SMAD7O15105 426 aaKnown RBP13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 CNTFRP26992 372 aa13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 EFNA4P52798 201 aa13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 DPF1Q92782 380 aa13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 BPESC1Q9GZL8 116 aa13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 SIGLEC8Q9NYZ4 499 aa13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 HOXB4P17483 251 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 HSD52Q0P140 79 aa13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 LY6G5BQ8NDX9 201 aa13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 C17orf77Q96MU5 243 aa13.49□□□□□ -0.25
SCAMP4-201ENST00000316097 BUB1B-PAK6H3BSN5 160 aa13.48□□□□□ -0.25
SCAMP4-201ENST00000316097 GATD1Q8NB37 220 aa13.48□□□□□ -0.25
SCAMP4-201ENST00000316097 OR1N2Q8NGR9 330 aa13.48□□□□□ -0.25
SCAMP4-201ENST00000316097 LGALS9BQ3B8N2 356 aa13.48□□□□□ -0.25
SCAMP4-201ENST00000316097 LGALS9CQ6DKI2 356 aa13.48□□□□□ -0.25
SCAMP4-201ENST00000316097 IGHV4-39P01824 125 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 SRSF1Q07955 248 aaKnown RBP eCLIP13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 PSG8Q9UQ74 426 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 NMUP48645 174 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 CRIP1P50238 77 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 PVRIGQ6DKI7 326 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 PRSS57Q6UWY2 283 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 C8orf31Q8N9H6 132 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 TMEM14CQ9P0S9 112 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 TMSB15BA0A087X1C1 80 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 A0A1B0GW15 77 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 OR9G4Q8NGQ1 327 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 INSIG2Q9Y5U4 225 aa13.47□□□□□ -0.25
SCAMP4-201ENST00000316097 TMEM213A2RRL7 107 aa13.46□□□□□ -0.25
SCAMP4-201ENST00000316097 RBP4P02753 201 aa13.46□□□□□ -0.25
SCAMP4-201ENST00000316097 ADAMTSL5Q6ZMM2 481 aa13.46□□□□□ -0.25
SCAMP4-201ENST00000316097 PCP2Q8IVA1 136 aa13.46□□□□□ -0.25
SCAMP4-201ENST00000316097 AMN1Q8IY45 258 aa13.46□□□□□ -0.25
SCAMP4-201ENST00000316097 TMEM75Q8N9X5 138 aa13.46□□□□□ -0.25
SCAMP4-201ENST00000316097 PRELID3AQ96N28 172 aa13.46□□□□□ -0.25
SCAMP4-201ENST00000316097 SPCS1Q9Y6A9 102 aa13.46□□□□□ -0.25
SCAMP4-201ENST00000316097 FBN2P35556 2912 aa13.46□□□□□ -0.26
SCAMP4-201ENST00000316097 IGHV1-3A0A0C4DH29 117 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms