RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 IGFL4Q6B9Z1 124 aa12.77□□□□□ -0.37
CLCF1-201ENST00000312438 ZNF492Q9P255 531 aa12.77□□□□□ -0.37
CLCF1-201ENST00000312438 SRD5A1P18405 259 aa12.76□□□□□ -0.37
CLCF1-201ENST00000312438 C8orf86Q6ZUL3 223 aa12.76□□□□□ -0.37
CLCF1-201ENST00000312438 RHPN1-AS1Q9BWJ2 59 aa12.76□□□□□ -0.37
CLCF1-201ENST00000312438 SMPXQ9UHP9 88 aa12.76□□□□□ -0.37
CLCF1-201ENST00000312438 HLA-DMBP28068 263 aa12.76□□□□□ -0.37
CLCF1-201ENST00000312438 ZNF418Q8TF45 676 aaPredicted RBP12.76□□□□□ -0.37
CLCF1-201ENST00000312438 DAZAP1Q96EP5 407 aaKnown RBP12.76□□□□□ -0.37
CLCF1-201ENST00000312438 SMR3AQ99954 134 aa12.76□□□□□ -0.37
CLCF1-201ENST00000312438 FLNAP21333 2647 aaKnown RBP12.76□□□□□ -0.37
CLCF1-201ENST00000312438 ZNF469Q96JG9 3925 aaPredicted RBP12.75□□□□□ -0.37
CLCF1-201ENST00000312438 SMIM27A0A1W2PRY6 76 aa12.75□□□□□ -0.37
CLCF1-201ENST00000312438 ZNF705FA8MVS1 300 aaPredicted RBP12.75□□□□□ -0.37
CLCF1-201ENST00000312438 CDX1P47902 265 aaPredicted RBP12.75□□□□□ -0.37
CLCF1-201ENST00000312438 SAPCD1Q5SSQ6 148 aa12.75□□□□□ -0.37
CLCF1-201ENST00000312438 MRPL53Q96EL3 112 aaKnown RBP12.75□□□□□ -0.37
CLCF1-201ENST00000312438 TRAV8-2A0A0B4J237 113 aa12.74□□□□□ -0.37
CLCF1-201ENST00000312438 C19orf71A6NCJ1 209 aa12.74□□□□□ -0.37
CLCF1-201ENST00000312438 LY6G6DO95868 133 aa12.74□□□□□ -0.37
CLCF1-201ENST00000312438 RNASE1P07998 156 aaKnown RBP12.74□□□□□ -0.37
CLCF1-201ENST00000312438 BMI1P35226 326 aa12.74□□□□□ -0.37
CLCF1-201ENST00000312438 RPL19P84098 196 aaKnown RBP12.74□□□□□ -0.37
CLCF1-201ENST00000312438 LINC00322Q6ZN03 302 aaPredicted RBP12.74□□□□□ -0.37
CLCF1-201ENST00000312438 C16orf92Q96LL3 132 aa12.74□□□□□ -0.37
CLCF1-201ENST00000312438 HECTD1Q9ULT8 2610 aa12.74□□□□□ -0.37
CLCF1-201ENST00000312438 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
CLCF1-201ENST00000312438 IGKV2-40A0A087WW87 121 aaPredicted RBP12.74□□□□□ -0.37
CLCF1-201ENST00000312438 RBAKDNA6NC62 111 aa12.74□□□□□ -0.37
CLCF1-201ENST00000312438 LGALS9O00182 355 aa12.74□□□□□ -0.37
CLCF1-201ENST00000312438 IGKV2D-40P01614 121 aaPredicted RBP12.74□□□□□ -0.37
CLCF1-201ENST00000312438 FASNP49327 2511 aaKnown RBP12.74□□□□□ -0.37
CLCF1-201ENST00000312438 IGHV4OR15-8A0A075B7B6 117 aa12.73□□□□□ -0.37
CLCF1-201ENST00000312438 A0A087WW49 117 aa12.73□□□□□ -0.37
CLCF1-201ENST00000312438 P01737 135 aa12.73□□□□□ -0.37
CLCF1-201ENST00000312438 S100A6P06703 90 aa12.73□□□□□ -0.37
CLCF1-201ENST00000312438 PRB4P10163 310 aaPredicted RBP12.73□□□□□ -0.37
CLCF1-201ENST00000312438 REC114Q7Z4M0 266 aa12.73□□□□□ -0.37
CLCF1-201ENST00000312438 RNF182Q8N6D2 247 aa12.73□□□□□ -0.37
CLCF1-201ENST00000312438 HILS1P60008 231 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 RPL11P62913 178 aaKnown RBP12.72□□□□□ -0.37
CLCF1-201ENST00000312438 CT83Q5H943 113 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 TSKUQ8WUA8 353 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 VGLL1Q99990 258 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 RPP21Q9H633 154 aaKnown RBP12.72□□□□□ -0.37
CLCF1-201ENST00000312438 NRN1Q9NPD7 142 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 PHOX2AO14813 284 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 CA1P00915 261 aaPredicted RBP12.72□□□□□ -0.37
CLCF1-201ENST00000312438 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 COX8CQ7Z4L0 72 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 ZC2HC1AQ96GY0 325 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 PRR25Q96S07 402 aa12.72□□□□□ -0.37
CLCF1-201ENST00000312438 TLN2Q9Y4G6 2542 aa12.71□□□□□ -0.37
CLCF1-201ENST00000312438 A8MWL6 223 aa12.71□□□□□ -0.38
CLCF1-201ENST00000312438 A8MWP6 167 aa12.71□□□□□ -0.38
CLCF1-201ENST00000312438 NPIPB6E9PJ23 425 aa12.71□□□□□ -0.38
CLCF1-201ENST00000312438 CT45A10P0DMU9 189 aa12.71□□□□□ -0.38
CLCF1-201ENST00000312438 HOXD3P31249 432 aaPredicted RBP12.71□□□□□ -0.38
CLCF1-201ENST00000312438 OR4B1Q8NGF8 309 aa12.71□□□□□ -0.38
CLCF1-201ENST00000312438 WFDC12Q8WWY7 111 aa12.71□□□□□ -0.38
CLCF1-201ENST00000312438 FRZBQ92765 325 aa12.71□□□□□ -0.38
CLCF1-201ENST00000312438 C16orf95Q9H693 158 aa12.71□□□□□ -0.38
CLCF1-201ENST00000312438 NAT8BQ9UHF3 227 aa12.71□□□□□ -0.38
CLCF1-201ENST00000312438 TMEM213A2RRL7 107 aa12.7□□□□□ -0.38
CLCF1-201ENST00000312438 IZUMO1RA6ND01 250 aa12.7□□□□□ -0.38
CLCF1-201ENST00000312438 PRAC2D3DTV9 90 aa12.7□□□□□ -0.38
CLCF1-201ENST00000312438 TCL1AP56279 114 aa12.7□□□□□ -0.38
CLCF1-201ENST00000312438 SYNJ2BPP57105 145 aa12.7□□□□□ -0.38
CLCF1-201ENST00000312438 C4orf3Q8WVX3 66 aa12.7□□□□□ -0.38
CLCF1-201ENST00000312438 JMJD8Q96S16 334 aa12.7□□□□□ -0.38
CLCF1-201ENST00000312438 SOCS3O14543 225 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST1H2BKO60814 126 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST1H2BJP06899 126 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 TRGC1P0CF51 173 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST1H2BOP23527 126 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST1H2BBP33778 126 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST1H2BDP58876 126 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 SNRPEP62304 92 aaKnown RBP12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST1H2BCP62807 126 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 KLF5Q13887 457 aaPredicted RBP12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST2H2BEQ16778 126 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 ACTL10Q5JWF8 245 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST1H2BHQ93079 126 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 C8orf49Q96NF6 230 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST1H2BNQ99877 126 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 HIST1H2BMQ99879 126 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 ASCL2Q99929 193 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 TRAPPC1Q9Y5R8 145 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 CRIP1P50238 77 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 COX19Q49B96 90 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 C18orf65Q6ZTR6 163 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 Q71RC1 249 aaPredicted RBP12.69□□□□□ -0.38
CLCF1-201ENST00000312438 TCF24Q7RTU0 167 aa12.69□□□□□ -0.38
CLCF1-201ENST00000312438 WIPF2Q8TF74 440 aaPredicted RBP12.69□□□□□ -0.38
CLCF1-201ENST00000312438 SONP18583 2426 aaKnown RBP12.68□□□□□ -0.38
CLCF1-201ENST00000312438 FAM231BA6NCW3 169 aa12.68□□□□□ -0.38
CLCF1-201ENST00000312438 C5orf52A6NGY3 159 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms