RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 RPP25LQ8N5L8 163 aaKnown RBP8.68□□□□□ -1.02
SCFD1-201ENST00000311943 OR51M1Q9H341 326 aa8.68□□□□□ -1.02
SCFD1-201ENST00000311943 IGKV2-40A0A087WW87 121 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-201ENST00000311943 C17orf112F2Z3M2 114 aa8.67□□□□□ -1.02
SCFD1-201ENST00000311943 OR7C2O60412 319 aa8.67□□□□□ -1.02
SCFD1-201ENST00000311943 IGKV2D-40P01614 121 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-201ENST00000311943 CXCL2P19875 107 aa8.67□□□□□ -1.02
SCFD1-201ENST00000311943 AZU1P20160 251 aa8.67□□□□□ -1.02
SCFD1-201ENST00000311943 ICAM4Q14773 271 aa8.67□□□□□ -1.02
SCFD1-201ENST00000311943 RNF141Q8WVD5 230 aa8.67□□□□□ -1.02
SCFD1-201ENST00000311943 A8MTW9 85 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 ZNF705GA8MUZ8 300 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-201ENST00000311943 NBEAP1P0C6P0 100 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 CT45A10P0DMU9 189 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 HIST1H1EP10412 219 aaKnown RBP8.66□□□□□ -1.02
SCFD1-201ENST00000311943 RANP62826 216 aaKnown RBP8.66□□□□□ -1.02
SCFD1-201ENST00000311943 ZNF705AQ6ZN79 300 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-201ENST00000311943 ST6GAL2Q96JF0 529 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 PAXXQ9BUH6 204 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 DYNC2H1Q8NCM8 4307 aaKnown RBP8.66□□□□□ -1.02
SCFD1-201ENST00000311943 CXorf65A6NEN9 183 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 HTN1P15515 57 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 ZNF726P1Q15940 193 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 INO80EQ8NBZ0 244 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-201ENST00000311943 OR10G4Q8NGN3 311 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 OR10G9Q8NGN4 311 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 OR10G7Q8NGN6 311 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 VGLL1Q99990 258 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 TMEM14CQ9P0S9 112 aa8.66□□□□□ -1.02
SCFD1-201ENST00000311943 C3orf84H3BNL1 204 aa8.65□□□□□ -1.02
SCFD1-201ENST00000311943 Q6ZNX1 250 aa8.65□□□□□ -1.02
SCFD1-201ENST00000311943 Q8TAT8 98 aa8.65□□□□□ -1.02
SCFD1-201ENST00000311943 TIMM9Q9Y5J7 89 aa8.65□□□□□ -1.02
SCFD1-201ENST00000311943 M6PRP20645 277 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 FHITP49789 147 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 NUTF2P61970 127 aaKnown RBP8.64□□□□□ -1.03
SCFD1-201ENST00000311943 UBE2L3P68036 154 aaKnown RBP8.64□□□□□ -1.03
SCFD1-201ENST00000311943 SGK494Q96LW2 274 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 HYLS1Q96M11 299 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 SLC50A1Q9BRV3 221 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 PRR9Q5T870 116 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 Q6ZTC4 211 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 C11orf45Q8TAV5 145 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 RAB24Q969Q5 203 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 AGPAT4-IT1Q9H0P7 198 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 TMPRSS5Q9H3S3 457 aa8.64□□□□□ -1.03
SCFD1-201ENST00000311943 BOLA2-SMG1P6H3BVE0 249 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 ARL14EPLP0DKL9 152 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 S100A7P31151 101 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 GNG5P63218 68 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 MRPL32Q9BYC8 188 aaKnown RBP8.63□□□□□ -1.03
SCFD1-201ENST00000311943 Q9H3A6 140 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 RPH3ALQ9UNE2 315 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 FGF8P55075 233 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-201ENST00000311943 ZNF266Q14584 549 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 ACOT6Q3I5F7 207 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-201ENST00000311943 GFI1BQ5VTD9 330 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 S100A7AQ86SG5 101 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 IGF2BP2-AS1Q96M15 143 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 CLUHP3Q96NS8 147 aa8.63□□□□□ -1.03
SCFD1-201ENST00000311943 GUK1Q16774 197 aa8.62□□□□□ -1.03
SCFD1-201ENST00000311943 OR2G3Q8NGZ4 309 aa8.62□□□□□ -1.03
SCFD1-201ENST00000311943 PHLDA1Q8WV24 401 aaPredicted RBP8.62□□□□□ -1.03
SCFD1-201ENST00000311943 TRAV8-1A0A0A6YYK1 113 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 TRAV12-3A0A0B4J271 114 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 A0A1W2PPV4 95 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 PLAC8L1A1L4L8 177 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 NPIPB6E9PJ23 425 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 DUSP14O95147 198 aaKnown RBP8.61□□□□□ -1.03
SCFD1-201ENST00000311943 MIFP14174 115 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 CDC34P49427 236 aaPredicted RBP8.61□□□□□ -1.03
SCFD1-201ENST00000311943 BTN1A1Q13410 526 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 C12orf74Q32Q52 190 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 SAMD13Q5VXD3 122 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 TMEM208Q9BTX3 173 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 C1QTNF4Q9BXJ3 329 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 C11orf68Q9H3H3 251 aaKnown RBP8.61□□□□□ -1.03
SCFD1-201ENST00000311943 KCNIP2Q9NS61 270 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 YTHDF2Q9Y5A9 579 aaKnown RBP8.61□□□□□ -1.03
SCFD1-201ENST00000311943 KCNRGQ8N5I3 272 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 OR10J6PQ8NGY7 276 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 ASB13Q8WXK3 278 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 PPP1R14DQ9NXH3 145 aa8.61□□□□□ -1.03
SCFD1-201ENST00000311943 LOC102723971A0A1B0GUV8 181 aa8.6□□□□□ -1.03
SCFD1-201ENST00000311943 A0A1B0GV50 99 aa8.6□□□□□ -1.03
SCFD1-201ENST00000311943 PGPA6NDG6 321 aa8.6□□□□□ -1.03
SCFD1-201ENST00000311943 CDKN1BP46527 198 aa8.6□□□□□ -1.03
SCFD1-201ENST00000311943 KHDC3LQ587J8 217 aa8.6□□□□□ -1.03
SCFD1-201ENST00000311943 FAM222AQ5U5X8 452 aa8.6□□□□□ -1.03
SCFD1-201ENST00000311943 LINC01587Q99440 93 aa8.6□□□□□ -1.03
SCFD1-201ENST00000311943 PSMG3Q9BT73 122 aaPredicted RBP8.6□□□□□ -1.03
SCFD1-201ENST00000311943 ZNF253O75346 499 aa8.59□□□□□ -1.03
SCFD1-201ENST00000311943 STAG3L2P0CL84 134 aa8.59□□□□□ -1.03
SCFD1-201ENST00000311943 STAG3L3P0CL85 134 aa8.59□□□□□ -1.03
SCFD1-201ENST00000311943 LGALSLQ3ZCW2 172 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-201ENST00000311943 IQCF2Q8IXL9 164 aa8.59□□□□□ -1.03
SCFD1-201ENST00000311943 TP53TG3Q9ULZ0 132 aa8.59□□□□□ -1.03
SCFD1-201ENST00000311943 INSP01308 110 aa8.59□□□□□ -1.03
SCFD1-201ENST00000311943 PDE6HQ13956 83 aa8.59□□□□□ -1.03
SCFD1-201ENST00000311943 TMEM41BQ5BJD5 291 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms