RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 MRPL16Q9NX20 251 aaKnown RBP10.41□□□□□ -0.74
TRIM35-201ENST00000305364 CEP192Q8TEP8 1941 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 MRPL51Q4U2R6 128 aaKnown RBP10.41□□□□□ -0.74
TRIM35-201ENST00000305364 AMTNQ6UX39 209 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 LCNL1Q6ZST4 164 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 ZNF833PQ6ZTB9 187 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 Q8TAT8 98 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 VGLL1Q99990 258 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 PLSCR4Q9NRQ2 329 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 RALYQ9UKM9 306 aaKnown RBP10.41□□□□□ -0.74
TRIM35-201ENST00000305364 ZGRF1Q86YA3 2104 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 SZT2Q5T011 3432 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 SH2D1AO60880 128 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 SMIM17P0DL12 118 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 S100A4P26447 101 aaKnown RBP10.41□□□□□ -0.74
TRIM35-201ENST00000305364 ZNF502Q8TBZ5 544 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 MLST8Q9BVC4 326 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 MALRD1Q5VYJ5 2156 aa10.4□□□□□ -0.74
TRIM35-201ENST00000305364 H3BMG7 143 aa10.4□□□□□ -0.74
TRIM35-201ENST00000305364 BOD1L2Q8IYS8 172 aa10.4□□□□□ -0.74
TRIM35-201ENST00000305364 CDX4O14627 284 aaPredicted RBP10.4□□□□□ -0.74
TRIM35-201ENST00000305364 NPYP01303 97 aa10.4□□□□□ -0.74
TRIM35-201ENST00000305364 IGHV3-23P01764 117 aa10.4□□□□□ -0.74
TRIM35-201ENST00000305364 APOMO95445 188 aa10.4□□□□□ -0.75
TRIM35-201ENST00000305364 GP9P14770 177 aa10.4□□□□□ -0.75
TRIM35-201ENST00000305364 CD300EQ496F6 205 aaPredicted RBP10.4□□□□□ -0.75
TRIM35-201ENST00000305364 NDUFS7O75251 213 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 ATP5LO75964 103 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 FXYD2P54710 66 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 IGKV1D-37A0A075B6S9 117 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 NPIPB6E9PJ23 425 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 RPL7P18124 248 aaKnown RBP10.39□□□□□ -0.75
TRIM35-201ENST00000305364 CNTFRP26992 372 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 ASCL5Q7RTU5 278 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 SIVA1O15304 175 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 CD40P25942 277 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 RPL11P62913 178 aaKnown RBP10.39□□□□□ -0.75
TRIM35-201ENST00000305364 PSMG4Q5JS54 123 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 SH2D6Q7Z4S9 175 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 ARPC1AQ92747 370 aa10.39□□□□□ -0.75
TRIM35-201ENST00000305364 NXT2Q9NPJ8 142 aaKnown RBP10.39□□□□□ -0.75
TRIM35-201ENST00000305364 NDUFS8O00217 210 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 CEACAM3P40198 252 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 DLX1P56177 255 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 WFDC12Q8WWY7 111 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 TMEM158Q8WZ71 300 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 MSMPQ1L6U9 139 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 CR1LQ2VPA4 569 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 KLF17Q5JT82 389 aaPredicted RBP10.38□□□□□ -0.75
TRIM35-201ENST00000305364 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 TRBV19A0A075B6N1 114 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 TRAV40A0A0B4J280 105 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 IGLV1-44P01699 117 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 MFAP4P55083 255 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 CHTOPQ9Y3Y2 248 aaKnown RBP10.38□□□□□ -0.75
TRIM35-201ENST00000305364 LYRM7Q5U5X0 104 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 ATP6V0BQ99437 205 aa10.38□□□□□ -0.75
TRIM35-201ENST00000305364 IGHV3OR16-13A0A075B7E8 117 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 IGHV3-74A0A0B4J1X5 117 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 TMEM238LA0A1B0GVL6 79 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 A6NJY4 79 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 TGFAP01135 160 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 CLEC3BP05452 202 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 CGB3P0DN86 165 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 CGB7P0DN87 165 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 PSMB2P49721 201 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 WFDC2Q14508 124 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 C17orf100A8MU93 164 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 RAB9AP51151 201 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 TMEM8BA6NDV4 472 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 TMEM75Q8N9X5 138 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 SIGLEC9Q9Y336 463 aa10.37□□□□□ -0.75
TRIM35-201ENST00000305364 Q1RN00 199 aa10.36□□□□□ -0.75
TRIM35-201ENST00000305364 CYSLTR1Q9Y271 337 aa10.36□□□□□ -0.75
TRIM35-201ENST00000305364 TLN1Q9Y490 2541 aaKnown RBP10.36□□□□□ -0.75
TRIM35-201ENST00000305364 WISP2O76076 250 aa10.36□□□□□ -0.75
TRIM35-201ENST00000305364 APOBEC3AP31941 199 aaPredicted RBP10.36□□□□□ -0.75
TRIM35-201ENST00000305364 LYPD2Q6UXB3 125 aa10.36□□□□□ -0.75
TRIM35-201ENST00000305364 DPF1Q92782 380 aa10.36□□□□□ -0.75
TRIM35-201ENST00000305364 FABP5P3A8MUU1 101 aa10.35□□□□□ -0.75
TRIM35-201ENST00000305364 LHBP01229 141 aa10.35□□□□□ -0.75
TRIM35-201ENST00000305364 KHDC1LQ5JSQ8 128 aa10.35□□□□□ -0.75
TRIM35-201ENST00000305364 PVRIGQ6DKI7 326 aa10.35□□□□□ -0.75
TRIM35-201ENST00000305364 SHANK2-AS3Q9BTD1 123 aa10.35□□□□□ -0.75
TRIM35-201ENST00000305364 F8W1H4 67 aa10.35□□□□□ -0.75
TRIM35-201ENST00000305364 RITA1Q96K30 269 aa10.35□□□□□ -0.75
TRIM35-201ENST00000305364 MGPP08493 103 aa10.35□□□□□ -0.75
TRIM35-201ENST00000305364 ABHD17AQ96GS6 310 aa10.35□□□□□ -0.75
TRIM35-201ENST00000305364 C7orf69Q9H7B7 122 aa10.35□□□□□ -0.75
TRIM35-201ENST00000305364 FASNP49327 2511 aaKnown RBP10.35□□□□□ -0.75
TRIM35-201ENST00000305364 TRBV25-1A0A075B6N4 114 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.34□□□□□ -0.75
TRIM35-201ENST00000305364 HOXA3O43365 443 aaPredicted RBP10.34□□□□□ -0.75
TRIM35-201ENST00000305364 TNFRSF6BO95407 300 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 MYCNOSP40205 109 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 VKORC1Q9BQB6 163 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 IGHV3-66A0A0C4DH42 116 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 UBTD1Q9HAC8 227 aa10.34□□□□□ -0.75
TRIM35-201ENST00000305364 SMPXQ9UHP9 88 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms