RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 SNRPEP62304 92 aaKnown RBP6.52□□□□□ -1.37
SNRPD1-201ENST00000300413 EIF4EBP1Q13541 118 aaPredicted RBP6.52□□□□□ -1.37
SNRPD1-201ENST00000300413 ACTL10Q5JWF8 245 aa6.52□□□□□ -1.37
SNRPD1-201ENST00000300413 LINC01551Q86U37 167 aa6.52□□□□□ -1.37
SNRPD1-201ENST00000300413 DNAJC9-AS1A6NH13 148 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 VWC2LB2RUY7 222 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 DIRC3C9JPN6 131 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 NUDT3O95989 172 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 BLCAPP62952 87 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 C11orf52Q96A22 123 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 HSPB9Q9BQS6 159 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 RPLP1P05386 114 aaKnown RBP6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 SRIP30626 198 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 FOXI2Q6ZQN5 318 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 RNF152Q8N8N0 203 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 OR10D4PQ8NGN7 298 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 OR2K2Q8NGT1 345 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 GLMPQ8WWB7 406 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 TMEM101Q96IK0 257 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 GNB1LQ9BYB4 327 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 CDH23Q9H251 3354 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 ATP5LO75964 103 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 IGHG4P01861 327 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 TRGC2P03986 189 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 NUDT10Q8NFP7 164 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 NUDT11Q96G61 164 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 AP5S1Q9NUS5 200 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 TRBV24-1A0A075B6N3 115 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 TGIF2-C20orf24A0A0A6YYL0 155 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 CDX1P47902 265 aaPredicted RBP6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 NXT2Q9NPJ8 142 aaKnown RBP6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 NIT2Q9NQR4 276 aa6.51□□□□□ -1.37
SNRPD1-201ENST00000300413 RHODO00212 210 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 SLC17A3O00476 420 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 DEFA6Q01524 100 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 GRIFINA4D1Z8 144 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 PMCHL1Q16048 86 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 Q71RC1 249 aaPredicted RBP6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 OR8A1Q8NGG7 326 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 LEPROTL1O95214 131 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 FOLR2P14207 255 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 MUC21Q5SSG8 566 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 PACRGQ96M98 296 aaPredicted RBP6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 RCHY1Q96PM5 261 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 PRADC1Q9BSG0 188 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 RNASE7Q9H1E1 156 aaKnown RBP6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 FAM231DQ6ZW35 169 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 OR9G4Q8NGQ1 327 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 TMEM70Q9BUB7 260 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 ST20Q9HBF5 79 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 HIVEP2P31629 2446 aa6.5□□□□□ -1.37
SNRPD1-201ENST00000300413 XIRP2A4UGR9 3374 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 SH2D1AO60880 128 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 IGKV1-17P01599 117 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 CRYGBP07316 175 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 CTSGP08311 255 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 BTF3P20290 206 aaKnown RBP6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 SRSF2Q01130 221 aaKnown RBP6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 MORN3Q6PF18 240 aaPredicted RBP6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 TMEM256Q8N2U0 113 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 LAMTOR2Q9Y2Q5 125 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 FBLN7Q53RD9 439 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 NDUFA11Q86Y39 141 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 FXYD5Q96DB9 178 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 TMEM160Q9NX00 188 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 LOC389332A0A1B0GUA5 103 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 WI2-2373I1.2A0A1W2PRP0 233 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 PFN1P07737 140 aaKnown RBP6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 OR10J3Q5JRS4 329 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 Q6ZPA2 131 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 ZNF414Q96IQ9 312 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 RITA1Q96K30 269 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 C7orf71A4D174 169 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 PROP1O75360 226 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 SMIM6P0DI80 62 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 CDKN1BP46527 198 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 C16orf54Q6UWD8 224 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 COPS9Q8WXC6 57 aa6.49□□□□□ -1.37
SNRPD1-201ENST00000300413 RNASE1P07998 156 aaKnown RBP6.48□□□□□ -1.37
SNRPD1-201ENST00000300413 ORMDL2Q53FV1 153 aa6.48□□□□□ -1.37
SNRPD1-201ENST00000300413 BBC3Q96PG8 261 aaPredicted RBP6.48□□□□□ -1.37
SNRPD1-201ENST00000300413 DPH3P1Q9H4G8 78 aa6.48□□□□□ -1.37
SNRPD1-201ENST00000300413 CBLN1P23435 193 aa6.48□□□□□ -1.37
SNRPD1-201ENST00000300413 Q8N6K4 173 aa6.48□□□□□ -1.37
SNRPD1-201ENST00000300413 KIAA1549Q9HCM3 1950 aa6.48□□□□□ -1.37
SNRPD1-201ENST00000300413 TEX48A0A1B0GUV7 120 aa6.48□□□□□ -1.37
SNRPD1-201ENST00000300413 PKIAP61925 76 aa6.48□□□□□ -1.37
SNRPD1-201ENST00000300413 SPXQ9BT56 116 aa6.48□□□□□ -1.37
SNRPD1-201ENST00000300413 M0R3E3 92 aa6.47□□□□□ -1.37
SNRPD1-201ENST00000300413 FAM90A2PQ658T7 463 aa6.47□□□□□ -1.37
SNRPD1-201ENST00000300413 BCL6BQ8N143 479 aaPredicted RBP6.47□□□□□ -1.37
SNRPD1-201ENST00000300413 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
SNRPD1-201ENST00000300413 NAV2Q8IVL1 2488 aa6.47□□□□□ -1.37
SNRPD1-201ENST00000300413 ZNF295-AS1Q8N0V1 137 aa6.47□□□□□ -1.37
SNRPD1-201ENST00000300413 H3BVH4 76 aa6.47□□□□□ -1.37
SNRPD1-201ENST00000300413 LGALS9O00182 355 aa6.47□□□□□ -1.37
SNRPD1-201ENST00000300413 OR4C5Q8NGB2 326 aa6.47□□□□□ -1.37
SNRPD1-201ENST00000300413 TMEM170AQ8WVE7 144 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms