RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 A0A087WW49 117 aa15.82■□□□□ 0.12
SMCO4-201ENST00000298966 ZNF320A2RRD8 509 aa15.82■□□□□ 0.12
SMCO4-201ENST00000298966 LEMD1Q68G75 181 aa15.82■□□□□ 0.12
SMCO4-201ENST00000298966 C16orf54Q6UWD8 224 aa15.82■□□□□ 0.12
SMCO4-201ENST00000298966 UNQ9165/PRO28630Q6UXU0 137 aa15.82■□□□□ 0.12
SMCO4-201ENST00000298966 RPUSD4Q96CM3 377 aaKnown RBP15.82■□□□□ 0.12
SMCO4-201ENST00000298966 IGHV7-4-1A0A0J9YVY3 117 aa15.81■□□□□ 0.12
SMCO4-201ENST00000298966 ATF4P18848 351 aaPredicted RBP15.81■□□□□ 0.12
SMCO4-201ENST00000298966 CEBPGP53567 150 aa15.81■□□□□ 0.12
SMCO4-201ENST00000298966 SLURP1P55000 103 aa15.81■□□□□ 0.12
SMCO4-201ENST00000298966 PSG9Q00887 426 aa15.81■□□□□ 0.12
SMCO4-201ENST00000298966 ARL6IP6Q8N6S5 226 aa15.81■□□□□ 0.12
SMCO4-201ENST00000298966 NIPSNAP3BQ9BS92 247 aa15.81■□□□□ 0.12
SMCO4-201ENST00000298966 TRBV19A0A075B6N1 114 aa15.8■□□□□ 0.12
SMCO4-201ENST00000298966 HELTA6NFD8 242 aa15.8■□□□□ 0.12
SMCO4-201ENST00000298966 GGTLC3B5MD39 225 aa15.8■□□□□ 0.12
SMCO4-201ENST00000298966 SAMD13Q5VXD3 122 aa15.8■□□□□ 0.12
SMCO4-201ENST00000298966 CLRN3Q8NCR9 226 aa15.8■□□□□ 0.12
SMCO4-201ENST00000298966 OTORQ9NRC9 128 aa15.8■□□□□ 0.12
SMCO4-201ENST00000298966 C19orf73Q9NVV2 129 aa15.8■□□□□ 0.12
SMCO4-201ENST00000298966 ZNF586Q9NXT0 402 aa15.8■□□□□ 0.12
SMCO4-201ENST00000298966 CLEC5AQ9NY25 188 aa15.8■□□□□ 0.12
SMCO4-201ENST00000298966 PEMTQ9UBM1 199 aa15.8■□□□□ 0.12
SMCO4-201ENST00000298966 A8MZ25 164 aa15.79■□□□□ 0.12
SMCO4-201ENST00000298966 H3BQ15 152 aa15.79■□□□□ 0.12
SMCO4-201ENST00000298966 KLF5Q13887 457 aaPredicted RBP15.79■□□□□ 0.12
SMCO4-201ENST00000298966 GLMPQ8WWB7 406 aa15.79■□□□□ 0.12
SMCO4-201ENST00000298966 SMIM7Q9BQ49 75 aa15.79■□□□□ 0.12
SMCO4-201ENST00000298966 SLC50A1Q9BRV3 221 aa15.79■□□□□ 0.12
SMCO4-201ENST00000298966 PARLQ9H300 379 aa15.79■□□□□ 0.12
SMCO4-201ENST00000298966 SMPXQ9UHP9 88 aa15.79■□□□□ 0.12
SMCO4-201ENST00000298966 ZNF727A8MUV8 499 aa15.78■□□□□ 0.12
SMCO4-201ENST00000298966 PNRC1Q12796 327 aaPredicted RBP15.78■□□□□ 0.12
SMCO4-201ENST00000298966 SIGLEC15Q6ZMC9 328 aa15.78■□□□□ 0.12
SMCO4-201ENST00000298966 Q8N1Y9 231 aa15.78■□□□□ 0.12
SMCO4-201ENST00000298966 C5orf17Q8NAS9 161 aa15.78■□□□□ 0.12
SMCO4-201ENST00000298966 IL17DQ8TAD2 202 aa15.78■□□□□ 0.12
SMCO4-201ENST00000298966 BLNKQ8WV28 456 aa15.78■□□□□ 0.12
SMCO4-201ENST00000298966 HIST1H2BAQ96A08 127 aa15.78■□□□□ 0.12
SMCO4-201ENST00000298966 TVP23CQ96ET8 276 aa15.78■□□□□ 0.12
SMCO4-201ENST00000298966 AAMDCQ9H7C9 122 aa15.78■□□□□ 0.12
SMCO4-201ENST00000298966 IGHV3OR16-8A0A075B7F1 116 aa15.77■□□□□ 0.12
SMCO4-201ENST00000298966 SCO2A0A1W2PP80 73 aa15.77■□□□□ 0.12
SMCO4-201ENST00000298966 SUMO1P63165 101 aaKnown RBP15.77■□□□□ 0.12
SMCO4-201ENST00000298966 ATRAIDQ6UW56 229 aa15.77■□□□□ 0.12
SMCO4-201ENST00000298966 NAT8Q9UHE5 227 aa15.77■□□□□ 0.12
SMCO4-201ENST00000298966 ZNF785A8K8V0 405 aa15.76■□□□□ 0.11
SMCO4-201ENST00000298966 ZNF207O43670 478 aaKnown RBP15.76■□□□□ 0.11
SMCO4-201ENST00000298966 RANP62826 216 aaKnown RBP15.76■□□□□ 0.11
SMCO4-201ENST00000298966 RHEBQ15382 184 aa15.76■□□□□ 0.11
SMCO4-201ENST00000298966 Q9H3A6 140 aa15.76■□□□□ 0.11
SMCO4-201ENST00000298966 PRELID1Q9Y255 219 aa15.76■□□□□ 0.11
SMCO4-201ENST00000298966 SERTM2A0A1B0GWG4 89 aa15.75■□□□□ 0.11
SMCO4-201ENST00000298966 TMEM213A2RRL7 107 aa15.75■□□□□ 0.11
SMCO4-201ENST00000298966 CHEK1O14757 476 aa15.75■□□□□ 0.11
SMCO4-201ENST00000298966 NDUFB4O95168 129 aa15.75■□□□□ 0.11
SMCO4-201ENST00000298966 SYNJ2BPP57105 145 aa15.75■□□□□ 0.11
SMCO4-201ENST00000298966 TMEM241Q24JQ0 296 aa15.75■□□□□ 0.11
SMCO4-201ENST00000298966 TM4SF20Q53R12 229 aa15.75■□□□□ 0.11
SMCO4-201ENST00000298966 RHPN1-AS1Q9BWJ2 59 aa15.75■□□□□ 0.11
SMCO4-201ENST00000298966 SDF2L1Q9HCN8 221 aa15.75■□□□□ 0.11
SMCO4-201ENST00000298966 PGPA6NDG6 321 aa15.74■□□□□ 0.11
SMCO4-201ENST00000298966 B4DEV8 164 aa15.74■□□□□ 0.11
SMCO4-201ENST00000298966 M0R036 132 aa15.74■□□□□ 0.11
SMCO4-201ENST00000298966 APOHP02749 345 aaPredicted RBP15.74■□□□□ 0.11
SMCO4-201ENST00000298966 S100A9P06702 114 aaKnown RBP15.74■□□□□ 0.11
SMCO4-201ENST00000298966 ZNF674Q2M3X9 581 aa15.74■□□□□ 0.11
SMCO4-201ENST00000298966 CMTM2Q8TAZ6 248 aa15.74■□□□□ 0.11
SMCO4-201ENST00000298966 SCO1O75880 301 aa15.73■□□□□ 0.11
SMCO4-201ENST00000298966 SLC25A5P05141 298 aaKnown RBP15.73■□□□□ 0.11
SMCO4-201ENST00000298966 C2CD4CQ8TF44 421 aa15.73■□□□□ 0.11
SMCO4-201ENST00000298966 MRPL53Q96EL3 112 aaKnown RBP15.73■□□□□ 0.11
SMCO4-201ENST00000298966 EPDR1Q9UM22 224 aa15.73■□□□□ 0.11
SMCO4-201ENST00000298966 FBLL1A6NHQ2 334 aaKnown RBP15.72■□□□□ 0.11
SMCO4-201ENST00000298966 C2orf70A6NJV1 201 aa15.72■□□□□ 0.11
SMCO4-201ENST00000298966 C9JCJ5 164 aa15.72■□□□□ 0.11
SMCO4-201ENST00000298966 CSN1S1P47710 185 aa15.72■□□□□ 0.11
SMCO4-201ENST00000298966 OR9G4Q8NGQ1 327 aa15.72■□□□□ 0.11
SMCO4-201ENST00000298966 ATG101Q9BSB4 218 aa15.72■□□□□ 0.11
SMCO4-201ENST00000298966 ZNF331Q9NQX6 463 aaPredicted RBP15.72■□□□□ 0.11
SMCO4-201ENST00000298966 C7orf77A4D0Y5 90 aa15.71■□□□□ 0.11
SMCO4-201ENST00000298966 K7EQM0 130 aa15.71■□□□□ 0.11
SMCO4-201ENST00000298966 PEX7O00628 323 aa15.71■□□□□ 0.11
SMCO4-201ENST00000298966 IGLV1-51P01701 117 aa15.71■□□□□ 0.11
SMCO4-201ENST00000298966 CBLN1P23435 193 aa15.71■□□□□ 0.11
SMCO4-201ENST00000298966 CNN1P51911 297 aaKnown RBP15.71■□□□□ 0.11
SMCO4-201ENST00000298966 TAS2R60P59551 318 aa15.71■□□□□ 0.11
SMCO4-201ENST00000298966 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.71■□□□□ 0.11
SMCO4-201ENST00000298966 LY96Q9Y6Y9 160 aa15.71■□□□□ 0.11
SMCO4-201ENST00000298966 IGHV3OR16-13A0A075B7E8 117 aa15.7■□□□□ 0.1
SMCO4-201ENST00000298966 A0A087WWC5 75 aa15.7■□□□□ 0.1
SMCO4-201ENST00000298966 IGHV3-49A0A0A0MS15 119 aa15.7■□□□□ 0.1
SMCO4-201ENST00000298966 IGHV3-74A0A0B4J1X5 117 aa15.7■□□□□ 0.1
SMCO4-201ENST00000298966 IGHV3-66A0A0C4DH42 116 aa15.7■□□□□ 0.1
SMCO4-201ENST00000298966 AKR1C3P42330 323 aa15.7■□□□□ 0.1
SMCO4-201ENST00000298966 DERL1Q9BUN8 251 aa15.7■□□□□ 0.1
SMCO4-201ENST00000298966 TUBA4BQ9H853 241 aa15.7■□□□□ 0.1
SMCO4-201ENST00000298966 NRN1Q9NPD7 142 aa15.7■□□□□ 0.1
SMCO4-201ENST00000298966 SIGLEC8Q9NYZ4 499 aa15.7■□□□□ 0.1
SMCO4-201ENST00000298966 H3BTX0 84 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms