RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 MIR17HGQ75NE6 70 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 C11orf52Q96A22 123 aa13.53□□□□□ -0.24
CCDC78-201ENST00000293889 H3BRN7 92 aa13.52□□□□□ -0.25
CCDC78-201ENST00000293889 GATCO43716 136 aaKnown RBP13.52□□□□□ -0.25
CCDC78-201ENST00000293889 PF4P02776 101 aa13.52□□□□□ -0.25
CCDC78-201ENST00000293889 ATP5G3P48201 142 aa13.52□□□□□ -0.25
CCDC78-201ENST00000293889 RHOBP62745 196 aa13.52□□□□□ -0.25
CCDC78-201ENST00000293889 OR9G4Q8NGQ1 327 aa13.52□□□□□ -0.25
CCDC78-201ENST00000293889 RNF2Q99496 336 aa13.52□□□□□ -0.25
CCDC78-201ENST00000293889 SHANK2-AS3Q9BTD1 123 aa13.52□□□□□ -0.25
CCDC78-201ENST00000293889 FUT9Q9Y231 359 aa13.52□□□□□ -0.25
CCDC78-201ENST00000293889 U3KQE9 123 aa13.52□□□□□ -0.25
CCDC78-201ENST00000293889 PKD1L1Q8TDX9 2849 aa13.52□□□□□ -0.25
CCDC78-201ENST00000293889 TRAV9-1A0A075B6T8 112 aa13.51□□□□□ -0.25
CCDC78-201ENST00000293889 IGHV3OR16-13A0A075B7E8 117 aa13.51□□□□□ -0.25
CCDC78-201ENST00000293889 IGHV3-74A0A0B4J1X5 117 aa13.51□□□□□ -0.25
CCDC78-201ENST00000293889 TRAV5A0A0B4J249 113 aa13.51□□□□□ -0.25
CCDC78-201ENST00000293889 LEMD1Q68G75 181 aa13.51□□□□□ -0.25
CCDC78-201ENST00000293889 ELOVL1Q9BW60 279 aa13.51□□□□□ -0.25
CCDC78-201ENST00000293889 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
CCDC78-201ENST00000293889 IGHV3-66A0A0C4DH42 116 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 IGHV7-4-1A0A0J9YVY3 117 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 C2orf70A6NJV1 201 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 OVOL1O14753 267 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 ARL14EPLP0DKL9 152 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 S100A7AQ86SG5 101 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 PACRGQ96M98 296 aaPredicted RBP13.5□□□□□ -0.25
CCDC78-201ENST00000293889 C9JCJ5 164 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 M0QZ24 198 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 BUB3O43684 328 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 NDUFB4O95168 129 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 GCHFRP30047 84 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 JOSD1Q15040 202 aaPredicted RBP13.5□□□□□ -0.25
CCDC78-201ENST00000293889 LINC00482Q8N8I6 264 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 PEMTQ9UBM1 199 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 SMPXQ9UHP9 88 aa13.5□□□□□ -0.25
CCDC78-201ENST00000293889 FABP4P15090 132 aa13.49□□□□□ -0.25
CCDC78-201ENST00000293889 CBLN1P23435 193 aa13.49□□□□□ -0.25
CCDC78-201ENST00000293889 S100A7P31151 101 aa13.49□□□□□ -0.25
CCDC78-201ENST00000293889 CST9LP1Q5W188 147 aa13.49□□□□□ -0.25
CCDC78-201ENST00000293889 ADAMTSL5Q6ZMM2 481 aa13.49□□□□□ -0.25
CCDC78-201ENST00000293889 FAM167A-AS1Q96KT0 104 aa13.49□□□□□ -0.25
CCDC78-201ENST00000293889 RHPN1-AS1Q9BWJ2 59 aa13.49□□□□□ -0.25
CCDC78-201ENST00000293889 SLC25A2Q9BXI2 301 aa13.49□□□□□ -0.25
CCDC78-201ENST00000293889 A0A1W2PPQ1 181 aa13.48□□□□□ -0.25
CCDC78-201ENST00000293889 CHEK1O14757 476 aa13.48□□□□□ -0.25
CCDC78-201ENST00000293889 AMBPP02760 352 aa13.48□□□□□ -0.25
CCDC78-201ENST00000293889 CSN3P07498 182 aa13.48□□□□□ -0.25
CCDC78-201ENST00000293889 C8orf88P0DMB2 117 aa13.48□□□□□ -0.25
CCDC78-201ENST00000293889 TECRQ9NZ01 308 aaKnown RBP13.48□□□□□ -0.25
CCDC78-201ENST00000293889 A0A1W2PS18 150 aa13.47□□□□□ -0.25
CCDC78-201ENST00000293889 C16orf54Q6UWD8 224 aa13.47□□□□□ -0.25
CCDC78-201ENST00000293889 SFRP2Q96HF1 295 aa13.47□□□□□ -0.25
CCDC78-201ENST00000293889 TRBV20OR9-2A0A075B6H5 130 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 XKRY2A2RUG3 117 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 GCGP01275 180 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 TAS2R45P59539 299 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 UBE2G2P60604 165 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 PKIAP61925 76 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 PRR31Q5SQ13 230 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 C1orf194Q5T5A4 169 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 CDPF1Q6NVV7 123 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 OR8I2Q8N0Y5 310 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 YTHDF2Q9Y5A9 579 aaKnown RBP13.46□□□□□ -0.25
CCDC78-201ENST00000293889 SELENOKQ9Y6D0 94 aa13.46□□□□□ -0.25
CCDC78-201ENST00000293889 GLMPQ8WWB7 406 aa13.46□□□□□ -0.26
CCDC78-201ENST00000293889 ZNF503Q96F45 646 aa13.46□□□□□ -0.26
CCDC78-201ENST00000293889 DERL1Q9BUN8 251 aa13.46□□□□□ -0.26
CCDC78-201ENST00000293889 TMEM167BQ9NRX6 74 aa13.46□□□□□ -0.26
CCDC78-201ENST00000293889 PDZD11Q5EBL8 140 aa13.45□□□□□ -0.26
CCDC78-201ENST00000293889 GRAMD2BQ96HH9 432 aa13.45□□□□□ -0.26
CCDC78-201ENST00000293889 RNF24Q9Y225 148 aa13.45□□□□□ -0.26
CCDC78-201ENST00000293889 SCO2A0A1W2PP80 73 aa13.44□□□□□ -0.26
CCDC78-201ENST00000293889 MRPS12O15235 138 aaKnown RBP13.44□□□□□ -0.26
CCDC78-201ENST00000293889 OR7C2O60412 319 aa13.44□□□□□ -0.26
CCDC78-201ENST00000293889 PYYP10082 97 aa13.44□□□□□ -0.26
CCDC78-201ENST00000293889 GP9P14770 177 aa13.44□□□□□ -0.26
CCDC78-201ENST00000293889 BMI1P35226 326 aa13.44□□□□□ -0.26
CCDC78-201ENST00000293889 OR10G8Q8NGN5 311 aa13.44□□□□□ -0.26
CCDC78-201ENST00000293889 PAXXQ9BUH6 204 aa13.44□□□□□ -0.26
CCDC78-201ENST00000293889 TMEM14CQ9P0S9 112 aa13.44□□□□□ -0.26
CCDC78-201ENST00000293889 CMYA5Q8N3K9 4069 aa13.43□□□□□ -0.26
CCDC78-201ENST00000293889 OR10J4P0C629 311 aa13.43□□□□□ -0.26
CCDC78-201ENST00000293889 RPL7P18124 248 aaKnown RBP13.43□□□□□ -0.26
CCDC78-201ENST00000293889 CNN1P51911 297 aaKnown RBP13.43□□□□□ -0.26
CCDC78-201ENST00000293889 PQLC2Q6ZP29 291 aa13.43□□□□□ -0.26
CCDC78-201ENST00000293889 BPIFA4PQ86YQ2 179 aa13.43□□□□□ -0.26
CCDC78-201ENST00000293889 STXBP6Q8NFX7 210 aa13.43□□□□□ -0.26
CCDC78-201ENST00000293889 OCC1Q8TAD7 63 aa13.43□□□□□ -0.26
CCDC78-201ENST00000293889 GPR82Q96P67 336 aa13.43□□□□□ -0.26
CCDC78-201ENST00000293889 SIGLEC8Q9NYZ4 499 aa13.43□□□□□ -0.26
CCDC78-201ENST00000293889 ZMAT5Q9UDW3 170 aaKnown RBP13.43□□□□□ -0.26
CCDC78-201ENST00000293889 SMAD5-AS1Q9Y6J3 95 aa13.43□□□□□ -0.26
CCDC78-201ENST00000293889 SNRPCP09234 159 aaKnown RBP13.42□□□□□ -0.26
CCDC78-201ENST00000293889 GZMBP10144 247 aa13.42□□□□□ -0.26
CCDC78-201ENST00000293889 SIGLEC15Q6ZMC9 328 aa13.42□□□□□ -0.26
CCDC78-201ENST00000293889 FXYD5Q96DB9 178 aa13.42□□□□□ -0.26
CCDC78-201ENST00000293889 IL36BQ9NZH7 164 aa13.42□□□□□ -0.26
CCDC78-201ENST00000293889 TCF24Q7RTU0 167 aa13.42□□□□□ -0.26
CCDC78-201ENST00000293889 TMEM18Q96B42 140 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms