RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SPINK8P0C7L1 97 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 C2orf82Q6UX34 121 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 RNF144BQ7Z419 303 aa9.6□□□□□ -0.87
SYNGAP1-201ENST00000293748 IGHV1-18A0A0C4DH31 117 aa9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 IGHV3-11P01762 117 aa9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 YPEL3P61236 119 aaPredicted RBP9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 ZNF672Q499Z4 452 aaPredicted RBP9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 TMEM155Q4W5P6 130 aa9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 C18orf32Q8TCD1 76 aa9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 TRGV2A0A075B6R0 118 aa9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 ZNF138P52744 262 aa9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 ANAPC10Q9UM13 185 aa9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 IGKV2-40A0A087WW87 121 aaPredicted RBP9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 IGKV2D-40P01614 121 aaPredicted RBP9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 GLMPQ8WWB7 406 aa9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 DPH3P1Q9H4G8 78 aa9.59□□□□□ -0.87
SYNGAP1-201ENST00000293748 LAMA1P25391 3075 aa9.59□□□□□ -0.88
SYNGAP1-201ENST00000293748 TRAV3A0A0B4J244 114 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 LINC00473A8K010 186 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 IGHV1-46P01743 117 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 LGALS1P09382 135 aaKnown RBP9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 FOXG1P55316 489 aaPredicted RBP9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 CT83Q5H943 113 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 Q6P435 159 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 TMEM158Q8WZ71 300 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 RSPO3Q9BXY4 272 aaPredicted RBP9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 SELENOKQ9Y6D0 94 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 IGKV3D-20A0A0C4DH25 116 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 VCYO14598 125 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 KIAA2026Q5HYC2 2103 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 C5orf63A6NC05 138 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 DSCR9P59020 149 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 PAX8Q06710 450 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 MAJINQ3KP22 176 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 FOXL2NBQ6ZUU3 175 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 PEMTQ9UBM1 199 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 USP34Q70CQ2 3546 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 E9PQ18 207 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 SH2D1AO60880 128 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 CDKN1AP38936 164 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 S100A7L2Q5SY68 101 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 C9orf139Q6ZV77 190 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 ZNF492Q9P255 531 aa9.58□□□□□ -0.88
SYNGAP1-201ENST00000293748 SIGLEC15Q6ZMC9 328 aa9.57□□□□□ -0.88
SYNGAP1-201ENST00000293748 PHF3Q92576 2039 aaKnown RBP9.57□□□□□ -0.88
SYNGAP1-201ENST00000293748 HIVEP3Q5T1R4 2406 aa9.57□□□□□ -0.88
SYNGAP1-201ENST00000293748 LILRA1O75019 489 aa9.57□□□□□ -0.88
SYNGAP1-201ENST00000293748 CRPP02741 224 aa9.57□□□□□ -0.88
SYNGAP1-201ENST00000293748 Q86TA4 180 aa9.57□□□□□ -0.88
SYNGAP1-201ENST00000293748 NPSP0C0P6 89 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 RNASE2P10153 161 aaKnown RBP9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 ZNF329Q86UD4 541 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 LIME1Q9H400 295 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 NCOR1P1Q9H4R4 102 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 OOSP1A8MZH6 123 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 TNFRSF6BO95407 300 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 FHL1Q13642 323 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 CDSNQ15517 529 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 DOCK7Q96N67 2140 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 MYO18BQ8IUG5 2567 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 CADP27708 2225 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 THBDP07204 575 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 AMN1Q8IY45 258 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 CD177Q8N6Q3 437 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 ZNF562Q6V9R5 426 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 OVOL2Q9BRP0 275 aa9.56□□□□□ -0.88
SYNGAP1-201ENST00000293748 C9orf118A6NHY6 69 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 SELLP14151 372 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 PDE6HQ13956 83 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 FRYLO94915 3013 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 IGHV3-64A0A075B6Q5 118 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 LINC00477Q96M19 166 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 MYO15AQ9UKN7 3530 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 TRBV20-1A0A075B6N2 111 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 IGHV2-26A0A0B4J1V2 119 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 A0A0U1RRA0 63 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 H0YJW9 148 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 MLNRO43193 412 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 IGHV1-8P0DP01 117 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 CD24P25063 80 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 ZNF876PQ49A33 203 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 Q6ZWC4 215 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 C7orf69Q9H7B7 122 aa9.55□□□□□ -0.88
SYNGAP1-201ENST00000293748 NOTCH3Q9UM47 2321 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 BPTFQ12830 3046 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 DOCK11Q5JSL3 2073 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 A0A1B0GUS0 222 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 FXYD7P58549 80 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 HIST2H2BCQ6DN03 193 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 TEX43Q6ZNM6 134 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 C5orf24Q7Z6I8 188 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 RASL10AQ92737 203 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 HEATR1Q9H583 2144 aaKnown RBP9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 HAX1O00165 279 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 IGLV1-44P01699 117 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 MALP21145 153 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 RPL15P61313 204 aaKnown RBP9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 C15orf32Q32M92 178 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 FAM231DQ6ZW35 169 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 STPG4Q8N801 248 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms