RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 FAM106CPP0CH98 169 aa10.67□□□□□ -0.7
SCAF4-201ENST00000286835 FAM106AQ4KMX7 169 aa10.67□□□□□ -0.7
SCAF4-201ENST00000286835 TNRC6BQ9UPQ9 1833 aaKnown RBP10.67□□□□□ -0.7
SCAF4-201ENST00000286835 IGKV3-7A0A075B6H7 116 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 A0A0G2JLM5 398 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 FAM120AOSQ5T036 256 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 USP9XQ93008 2570 aaPredicted RBP10.66□□□□□ -0.7
SCAF4-201ENST00000286835 IGHV3OR16-10A0A075B7F0 116 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 MGAQ8IWI9 3026 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 LOC400499M0QZD8 3231 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 IGHV1-3A0A0C4DH29 117 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 TIMM23O14925 209 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 HBDP02042 147 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 ECSCRQ19T08 205 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 CLEC2AQ6UVW9 174 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 ARL6IP6Q8N6S5 226 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 PCSK5Q92824 1860 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 THAP8Q8NA92 274 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 FOXC2Q99958 501 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 MAP1LC3AQ9H492 121 aa10.66□□□□□ -0.7
SCAF4-201ENST00000286835 A0A1B0GXF2 115 aa10.65□□□□□ -0.7
SCAF4-201ENST00000286835 ZNF207O43670 478 aaKnown RBP10.65□□□□□ -0.7
SCAF4-201ENST00000286835 COX6B1P14854 86 aa10.65□□□□□ -0.7
SCAF4-201ENST00000286835 FER1L6-AS1Q8NA97 138 aa10.65□□□□□ -0.7
SCAF4-201ENST00000286835 URB1-AS1Q96HZ7 61 aa10.65□□□□□ -0.7
SCAF4-201ENST00000286835 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
SCAF4-201ENST00000286835 GP9P14770 177 aa10.65□□□□□ -0.7
SCAF4-201ENST00000286835 LOXL1Q08397 574 aaPredicted RBP10.65□□□□□ -0.7
SCAF4-201ENST00000286835 ZNF747Q9BV97 191 aa10.65□□□□□ -0.7
SCAF4-201ENST00000286835 ZNF492Q9P255 531 aa10.65□□□□□ -0.7
SCAF4-201ENST00000286835 CTSZQ9UBR2 303 aa10.65□□□□□ -0.7
SCAF4-201ENST00000286835 DSCAML1Q8TD84 2053 aa10.65□□□□□ -0.7
SCAF4-201ENST00000286835 DMDP11532 3685 aa10.65□□□□□ -0.71
SCAF4-201ENST00000286835 COX8AP10176 69 aa10.65□□□□□ -0.71
SCAF4-201ENST00000286835 LEPP41159 167 aa10.65□□□□□ -0.71
SCAF4-201ENST00000286835 RHOGP84095 191 aa10.65□□□□□ -0.71
SCAF4-201ENST00000286835 WNK1Q9H4A3 2382 aa10.65□□□□□ -0.71
SCAF4-201ENST00000286835 LOXP28300 417 aaPredicted RBP10.64□□□□□ -0.71
SCAF4-201ENST00000286835 TMEM75Q8N9X5 138 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 SCRT2Q9NQ03 307 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 SEC11AP67812 179 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 SIGLEC8Q9NYZ4 499 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 K7EMI3 77 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 IGLC1P0CG04 106 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 MFAP4P55083 255 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 PSG3Q16557 428 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 CT83Q5H943 113 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 NEU4Q8WWR8 484 aaPredicted RBP10.64□□□□□ -0.71
SCAF4-201ENST00000286835 SMIM12Q96EX1 92 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 TTTY13Q9BZ97 58 aa10.64□□□□□ -0.71
SCAF4-201ENST00000286835 HIVEP3Q5T1R4 2406 aa10.63□□□□□ -0.71
SCAF4-201ENST00000286835 PSMB11A5LHX3 300 aa10.63□□□□□ -0.71
SCAF4-201ENST00000286835 SH2D1AO60880 128 aa10.63□□□□□ -0.71
SCAF4-201ENST00000286835 CLEC3BP05452 202 aa10.63□□□□□ -0.71
SCAF4-201ENST00000286835 SMIM13P0DJ93 91 aa10.63□□□□□ -0.71
SCAF4-201ENST00000286835 GTSCR1Q86UQ5 136 aa10.63□□□□□ -0.71
SCAF4-201ENST00000286835 PCP2Q8IVA1 136 aa10.63□□□□□ -0.71
SCAF4-201ENST00000286835 GFRA4Q9GZZ7 299 aa10.63□□□□□ -0.71
SCAF4-201ENST00000286835 JKAMPQ9P055 326 aa10.63□□□□□ -0.71
SCAF4-201ENST00000286835 HAX1O00165 279 aa10.63□□□□□ -0.71
SCAF4-201ENST00000286835 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
SCAF4-201ENST00000286835 TRBV19A0A075B6N1 114 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 IGFL2Q6UWQ7 119 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 DEFB104AQ8WTQ1 72 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 NCOR1P1Q9H4R4 102 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 BMI1P35226 326 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 KLRD1Q13241 179 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 SPANXN1Q5VSR9 72 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 BCL6BQ8N143 479 aaPredicted RBP10.62□□□□□ -0.71
SCAF4-201ENST00000286835 MTURNQ8N3F0 131 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 FAM169BQ8N8A8 192 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 TEX36Q5VZQ5 186 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 DKK2Q9UBU2 259 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 ASPMQ8IZT6 3477 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 IGLV2-23P01705 113 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 MYOZ3Q8TDC0 251 aa10.62□□□□□ -0.71
SCAF4-201ENST00000286835 C19orf71A6NCJ1 209 aa10.61□□□□□ -0.71
SCAF4-201ENST00000286835 RPL7P18124 248 aaKnown RBP10.61□□□□□ -0.71
SCAF4-201ENST00000286835 MLST8Q9BVC4 326 aa10.61□□□□□ -0.71
SCAF4-201ENST00000286835 KLF12Q9Y4X4 402 aa10.61□□□□□ -0.71
SCAF4-201ENST00000286835 HSD52Q0P140 79 aa10.61□□□□□ -0.71
SCAF4-201ENST00000286835 HIST1H4GQ99525 98 aa10.61□□□□□ -0.71
SCAF4-201ENST00000286835 C21orf62Q9NYP8 219 aa10.61□□□□□ -0.71
SCAF4-201ENST00000286835 K7EP13 123 aa10.61□□□□□ -0.71
SCAF4-201ENST00000286835 SMAD7O15105 426 aaKnown RBP10.61□□□□□ -0.71
SCAF4-201ENST00000286835 GRNP28799 593 aaKnown RBP10.61□□□□□ -0.71
SCAF4-201ENST00000286835 Q6AWC8 147 aa10.61□□□□□ -0.71
SCAF4-201ENST00000286835 BUB1B-PAK6H3BSN5 160 aa10.6□□□□□ -0.71
SCAF4-201ENST00000286835 NPYP01303 97 aa10.6□□□□□ -0.71
SCAF4-201ENST00000286835 HLA-DMBP28068 263 aa10.6□□□□□ -0.71
SCAF4-201ENST00000286835 MRPL51Q4U2R6 128 aaKnown RBP10.6□□□□□ -0.71
SCAF4-201ENST00000286835 TMEM155Q4W5P6 130 aa10.6□□□□□ -0.71
SCAF4-201ENST00000286835 SHANK2-AS3Q9BTD1 123 aa10.6□□□□□ -0.71
SCAF4-201ENST00000286835 PRSS22Q9GZN4 317 aa10.6□□□□□ -0.71
SCAF4-201ENST00000286835 NDUFA3O95167 84 aa10.6□□□□□ -0.71
SCAF4-201ENST00000286835 SAMD5Q5TGI4 173 aa10.6□□□□□ -0.71
SCAF4-201ENST00000286835 LINC01545Q5VT33 79 aa10.6□□□□□ -0.71
SCAF4-201ENST00000286835 LCNL1Q6ZST4 164 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms