RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PDE6HQ13956 83 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 Q6ZSR3 168 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 CHCHD5Q9BSY4 110 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 IGKV3D-20A0A0C4DH25 116 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 COX6CP09669 75 aa10.93□□□□□ -0.66
NPC1-201ENST00000269228 NDUFA3O95167 84 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 ZNF415Q09FC8 603 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 MSMPQ1L6U9 139 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 DEFB104AQ8WTQ1 72 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 NXT2Q9NPJ8 142 aaKnown RBP10.92□□□□□ -0.66
NPC1-201ENST00000269228 CEP192Q8TEP8 1941 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 ATP5L2Q7Z4Y8 100 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 C8orf31Q8N9H6 132 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 SMIM12Q96EX1 92 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 PMCHL2Q9BQD1 86 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 LINC00614P0C842 121 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 FBXL19-AS1Q494R0 122 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 OR11H6Q8NGC7 330 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 CYSLTR1Q9Y271 337 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 H3BRM9 83 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 SNAI2O43623 268 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 TCTEX1D4Q5JR98 221 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 VPREB3Q9UKI3 123 aa10.92□□□□□ -0.66
NPC1-201ENST00000269228 TLN1Q9Y490 2541 aaKnown RBP10.92□□□□□ -0.66
NPC1-201ENST00000269228 Q86TA4 180 aa10.91□□□□□ -0.66
NPC1-201ENST00000269228 C14orf144Q96I85 54 aa10.91□□□□□ -0.66
NPC1-201ENST00000269228 POU2AF1Q16633 256 aa10.91□□□□□ -0.66
NPC1-201ENST00000269228 CXCL1P09341 107 aa10.91□□□□□ -0.66
NPC1-201ENST00000269228 TMEM242Q9NWH2 141 aa10.91□□□□□ -0.66
NPC1-201ENST00000269228 XCL2Q9UBD3 114 aa10.91□□□□□ -0.66
NPC1-201ENST00000269228 HBDP02042 147 aa10.91□□□□□ -0.66
NPC1-201ENST00000269228 OR13C6PQ8NH95 151 aa10.91□□□□□ -0.66
NPC1-201ENST00000269228 CYYR1Q96J86 154 aa10.91□□□□□ -0.66
NPC1-201ENST00000269228 PTPRSQ13332 1948 aa10.91□□□□□ -0.66
NPC1-201ENST00000269228 NDUFA4O00483 81 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HAPLN4Q86UW8 402 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 ST6GALNAC6Q969X2 333 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 PRDM13Q9H4Q3 707 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 NAV2Q8IVL1 2488 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 MYO18BQ8IUG5 2567 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 FOXL1Q12952 345 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 CENPVL3A0A0U1RRI6 287 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 JOSD1Q15040 202 aaPredicted RBP10.9□□□□□ -0.66
NPC1-201ENST00000269228 TRBV24-1A0A075B6N3 115 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST1H2BKO60814 126 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST1H2BJP06899 126 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 ELANEP08246 267 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST1H2BOP23527 126 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST1H2BBP33778 126 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST1H2BDP58876 126 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST1H2BCP62807 126 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST2H2BEQ16778 126 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 ORMDL2Q53FV1 153 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.9□□□□□ -0.66
NPC1-201ENST00000269228 COPS9Q8WXC6 57 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST1H2BHQ93079 126 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST1H2BNQ99877 126 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 HIST1H2BMQ99879 126 aa10.9□□□□□ -0.66
NPC1-201ENST00000269228 PCNX3Q9H6A9 2034 aa10.9□□□□□ -0.67
NPC1-201ENST00000269228 D6R8Y8 96 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 C14orf178Q8N769 122 aaPredicted RBP10.89□□□□□ -0.67
NPC1-201ENST00000269228 PRADC1Q9BSG0 188 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 LY96Q9Y6Y9 160 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 TMEM95Q3KNT9 176 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 ZNF876PQ49A33 203 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 NIT1Q86X76 327 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 NUP35Q8NFH5 326 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 LURAP1LQ8IV03 231 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 OR9G4Q8NGQ1 327 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 TRBV19A0A075B6N1 114 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 IGLC1P0CG04 106 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 FABP2P12104 132 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 SPINK13Q1W4C9 94 aa10.89□□□□□ -0.67
NPC1-201ENST00000269228 COLCA2A8K830 154 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 DEFB130BP0DP73 79 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 DEFB130AP0DP74 79 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 CD28P10747 220 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 DTX2Q86UW9 622 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 LYPD6Q86Y78 171 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 SLC25A2Q9BXI2 301 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 C1orf194Q5T5A4 169 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 FAM90A2PQ658T7 463 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 CFAP161Q6P656 301 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 C8orf86Q6ZUL3 223 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 TTC9CQ8N5M4 171 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 IGLC7A0M8Q6 106 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 MALP21145 153 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 RPL36AP83881 106 aaKnown RBP10.88□□□□□ -0.67
NPC1-201ENST00000269228 RPL36ALQ969Q0 106 aaKnown RBP10.88□□□□□ -0.67
NPC1-201ENST00000269228 DPH3P1Q9H4G8 78 aa10.88□□□□□ -0.67
NPC1-201ENST00000269228 RNASE1P07998 156 aaKnown RBP10.87□□□□□ -0.67
NPC1-201ENST00000269228 MUC22E2RYF6 1773 aaPredicted RBP10.87□□□□□ -0.67
NPC1-201ENST00000269228 A0A087WWL8 130 aa10.87□□□□□ -0.67
NPC1-201ENST00000269228 A0A087WX48 190 aa10.87□□□□□ -0.67
NPC1-201ENST00000269228 ZFP36P26651 326 aaKnown RBP10.87□□□□□ -0.67
NPC1-201ENST00000269228 MST1LQ2TV78 715 aa10.87□□□□□ -0.67
NPC1-201ENST00000269228 FNDC4Q9H6D8 234 aaPredicted RBP10.87□□□□□ -0.67
NPC1-201ENST00000269228 MED12LQ86YW9 2145 aa10.87□□□□□ -0.67
NPC1-201ENST00000269228 CRPP02741 224 aa10.86□□□□□ -0.67
NPC1-201ENST00000269228 ARMS2P0C7Q2 107 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms