RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TMEM249Q2WGJ8 235 aa11.21□□□□□ -0.61
CDH3-201ENST00000264012 SPCS1Q9Y6A9 102 aa11.21□□□□□ -0.61
CDH3-201ENST00000264012 DNAL4O96015 105 aa11.21□□□□□ -0.62
CDH3-201ENST00000264012 PFN1P07737 140 aaKnown RBP11.2□□□□□ -0.62
CDH3-201ENST00000264012 KRTAP27-1Q3LI81 207 aa11.2□□□□□ -0.62
CDH3-201ENST00000264012 MS4A6AQ9H2W1 248 aa11.2□□□□□ -0.62
CDH3-201ENST00000264012 POU2AF1Q16633 256 aa11.2□□□□□ -0.62
CDH3-201ENST00000264012 DPH3P1Q9H4G8 78 aa11.2□□□□□ -0.62
CDH3-201ENST00000264012 Q6ZSR3 168 aa11.2□□□□□ -0.62
CDH3-201ENST00000264012 LTBP2Q14767 1821 aa11.2□□□□□ -0.62
CDH3-201ENST00000264012 SEC11AP67812 179 aa11.2□□□□□ -0.62
CDH3-201ENST00000264012 CYYR1Q96J86 154 aa11.2□□□□□ -0.62
CDH3-201ENST00000264012 CTSZQ9UBR2 303 aa11.2□□□□□ -0.62
CDH3-201ENST00000264012 C22orf46C9J442 243 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 FXYD7P58549 80 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 C14orf178Q8N769 122 aaPredicted RBP11.19□□□□□ -0.62
CDH3-201ENST00000264012 TRBV19A0A075B6N1 114 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 LINC01549A6NIU2 74 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 LYPD6Q86Y78 171 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 SLC25A2Q9BXI2 301 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 AMN1Q8IY45 258 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 GGTLC3B5MD39 225 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 SCGB1A1P11684 91 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 ZNF876PQ49A33 203 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
CDH3-201ENST00000264012 IGHV3-73A0A0B4J1V6 119 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 NDUFS7O75251 213 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 TDGF1P3P51864 188 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 RNF182Q8N6D2 247 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 SPRNQ5BIV9 151 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 DMRTC2Q8IXT2 367 aaPredicted RBP11.18□□□□□ -0.62
CDH3-201ENST00000264012 NHP2Q9NX24 153 aaKnown RBP11.18□□□□□ -0.62
CDH3-201ENST00000264012 MRPL27Q9P0M9 148 aaKnown RBP11.18□□□□□ -0.62
CDH3-201ENST00000264012 SMPXQ9UHP9 88 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 CD300EQ496F6 205 aaPredicted RBP11.18□□□□□ -0.62
CDH3-201ENST00000264012 FREM1Q5H8C1 2179 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 OR5A1Q8NGJ0 315 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 CHCHD5Q9BSY4 110 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
CDH3-201ENST00000264012 ARMS2P0C7Q2 107 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 C3orf79P0CE67 100 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 ZNF415Q09FC8 603 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 DEFB104AQ8WTQ1 72 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 TRGV1A0A0A0MS02 117 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 H3BUT2 72 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 TMEM75Q8N9X5 138 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 COL4A3Q01955 1670 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 ZNF815PA8K554 130 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 CFAP161Q6P656 301 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 ZNF492Q9P255 531 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 SMKR1H3BMG3 65 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 IL17RELQ6ZVW7 336 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 ORAOV1Q8WV07 137 aa11.17□□□□□ -0.62
CDH3-201ENST00000264012 TYMSP04818 313 aa11.16□□□□□ -0.62
CDH3-201ENST00000264012 LYPD6BQ8NI32 183 aa11.16□□□□□ -0.62
CDH3-201ENST00000264012 Q96MF0 132 aa11.16□□□□□ -0.62
CDH3-201ENST00000264012 LHBP01229 141 aa11.16□□□□□ -0.62
CDH3-201ENST00000264012 RPL35AP18077 110 aaKnown RBP11.16□□□□□ -0.62
CDH3-201ENST00000264012 DEFB131AP59861 70 aa11.16□□□□□ -0.62
CDH3-201ENST00000264012 Q0VG73 95 aa11.16□□□□□ -0.62
CDH3-201ENST00000264012 A0A1B0GWB2 263 aa11.16□□□□□ -0.62
CDH3-201ENST00000264012 IGLC1P0CG04 106 aa11.16□□□□□ -0.62
CDH3-201ENST00000264012 UBE2E2Q96LR5 201 aa11.16□□□□□ -0.62
CDH3-201ENST00000264012 VCYO14598 125 aa11.15□□□□□ -0.62
CDH3-201ENST00000264012 C8orf31Q8N9H6 132 aa11.15□□□□□ -0.62
CDH3-201ENST00000264012 OTOGLQ3ZCN5 2332 aa11.15□□□□□ -0.62
CDH3-201ENST00000264012 CR1LQ2VPA4 569 aa11.15□□□□□ -0.62
CDH3-201ENST00000264012 C3orf56Q8N813 242 aa11.15□□□□□ -0.62
CDH3-201ENST00000264012 EREGO14944 169 aa11.15□□□□□ -0.62
CDH3-201ENST00000264012 INSP01308 110 aa11.15□□□□□ -0.62
CDH3-201ENST00000264012 RPL36AP83881 106 aaKnown RBP11.14□□□□□ -0.63
CDH3-201ENST00000264012 UBE2V1Q13404 147 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 RPL36ALQ969Q0 106 aaKnown RBP11.14□□□□□ -0.63
CDH3-201ENST00000264012 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 J3QKU1 62 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 DEFB121Q5J5C9 76 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 H3BRN7 92 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 MALP21145 153 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 CSTL1Q9H114 145 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 CSPG4Q6UVK1 2322 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 A0A087WWL8 130 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 HSD52Q0P140 79 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 CT83Q5H943 113 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 SFTA2Q6UW10 78 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 C1orf122Q6ZSJ8 110 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 THAP8Q8NA92 274 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 C8orf49Q96NF6 230 aa11.14□□□□□ -0.63
CDH3-201ENST00000264012 IGHV3-64A0A075B6Q5 118 aa11.13□□□□□ -0.63
CDH3-201ENST00000264012 TRBV7-9A0A0J9YWB2 115 aa11.13□□□□□ -0.63
CDH3-201ENST00000264012 PRR20EP86478 221 aa11.13□□□□□ -0.63
CDH3-201ENST00000264012 PRR20CP86479 221 aa11.13□□□□□ -0.63
CDH3-201ENST00000264012 PRR20DP86480 221 aa11.13□□□□□ -0.63
CDH3-201ENST00000264012 PRR20BP86481 221 aa11.13□□□□□ -0.63
CDH3-201ENST00000264012 PRR20AP86496 221 aa11.13□□□□□ -0.63
CDH3-201ENST00000264012 OR9G4Q8NGQ1 327 aa11.13□□□□□ -0.63
CDH3-201ENST00000264012 TMEM158Q8WZ71 300 aa11.13□□□□□ -0.63
CDH3-201ENST00000264012 TMEM14CQ9P0S9 112 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms