RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 WFDC3Q8IUB2 231 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 PXMP4Q9Y6I8 212 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 TRBV24-1A0A075B6N3 115 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 LINC00587B1AMM8 73 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST1H2BKO60814 126 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HYPMO75409 117 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST1H2BJP06899 126 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST1H2BOP23527 126 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST1H2BBP33778 126 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST1H2BDP58876 126 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST1H2BCP62807 126 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 PRR20EP86478 221 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 PRR20CP86479 221 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 PRR20DP86480 221 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 PRR20BP86481 221 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 PRR20AP86496 221 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST2H2BEQ16778 126 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.73□□□□□ -0.21
SDF4-201ENST00000263741 MRAPQ8TCY5 172 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST1H2BHQ93079 126 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 GRAMD2BQ96HH9 432 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST1H2BNQ99877 126 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 HIST1H2BMQ99879 126 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 TRGC2P03986 189 aa13.72□□□□□ -0.21
SDF4-201ENST00000263741 TMEM241Q24JQ0 296 aa13.72□□□□□ -0.21
SDF4-201ENST00000263741 FFAR4Q5NUL3 377 aa13.72□□□□□ -0.21
SDF4-201ENST00000263741 STXBP6Q8NFX7 210 aa13.72□□□□□ -0.21
SDF4-201ENST00000263741 OR10G9Q8NGN4 311 aa13.72□□□□□ -0.21
SDF4-201ENST00000263741 OR10G7Q8NGN6 311 aa13.72□□□□□ -0.21
SDF4-201ENST00000263741 HIGD1AQ9Y241 93 aa13.72□□□□□ -0.21
SDF4-201ENST00000263741 TRAV25A0A0B4J276 109 aa13.71□□□□□ -0.21
SDF4-201ENST00000263741 ADIRFQ15847 76 aa13.71□□□□□ -0.21
SDF4-201ENST00000263741 GCSAMLQ5JQS6 135 aa13.71□□□□□ -0.21
SDF4-201ENST00000263741 GTSCR1Q86UQ5 136 aa13.71□□□□□ -0.21
SDF4-201ENST00000263741 Q8N1Y9 231 aa13.71□□□□□ -0.21
SDF4-201ENST00000263741 RPP25LQ8N5L8 163 aaKnown RBP13.71□□□□□ -0.21
SDF4-201ENST00000263741 SPAG8Q99932 426 aaPredicted RBP13.71□□□□□ -0.21
SDF4-201ENST00000263741 SLC25A39Q9BZJ4 359 aaPredicted RBP13.71□□□□□ -0.21
SDF4-201ENST00000263741 MS4A6AQ9H2W1 248 aa13.71□□□□□ -0.21
SDF4-201ENST00000263741 COX7A2P2O60397 106 aa13.71□□□□□ -0.21
SDF4-201ENST00000263741 PLP1P60201 277 aa13.71□□□□□ -0.21
SDF4-201ENST00000263741 MORN5Q5VZ52 161 aa13.71□□□□□ -0.21
SDF4-201ENST00000263741 TMEM37Q8WXS4 190 aa13.71□□□□□ -0.21
SDF4-201ENST00000263741 H3BRN7 92 aa13.7□□□□□ -0.22
SDF4-201ENST00000263741 MPDU1O75352 247 aa13.7□□□□□ -0.22
SDF4-201ENST00000263741 RPL29P47914 159 aaKnown RBP13.7□□□□□ -0.22
SDF4-201ENST00000263741 ACOT6Q3I5F7 207 aaPredicted RBP13.7□□□□□ -0.22
SDF4-201ENST00000263741 SIGLEC15Q6ZMC9 328 aa13.7□□□□□ -0.22
SDF4-201ENST00000263741 DEFB121Q5J5C9 76 aa13.7□□□□□ -0.22
SDF4-201ENST00000263741 OR8I2Q8N0Y5 310 aa13.7□□□□□ -0.22
SDF4-201ENST00000263741 AGRNO00468 2067 aa13.69□□□□□ -0.22
SDF4-201ENST00000263741 LINC00305Q7Z4B0 112 aa13.69□□□□□ -0.22
SDF4-201ENST00000263741 SHANK2-AS3Q9BTD1 123 aa13.69□□□□□ -0.22
SDF4-201ENST00000263741 H7BYZ3 331 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 TRGC1P0CF51 173 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 DNLZQ5SXM8 178 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 RPUSD4Q96CM3 377 aaKnown RBP13.68□□□□□ -0.22
SDF4-201ENST00000263741 PFDN5Q99471 154 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 OR4C46A6NHA9 309 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 ZNF124Q15973 351 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 ODF3L2Q3SX64 289 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 C10orf113Q5VZT2 155 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 HIST3H2BBQ8N257 126 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 DEFB125Q8N687 156 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 SRD5A3Q9H8P0 318 aa13.68□□□□□ -0.22
SDF4-201ENST00000263741 HELTA6NFD8 242 aa13.67□□□□□ -0.22
SDF4-201ENST00000263741 CDC34P49427 236 aaPredicted RBP13.67□□□□□ -0.22
SDF4-201ENST00000263741 ANAPC16Q96DE5 110 aa13.67□□□□□ -0.22
SDF4-201ENST00000263741 IFITM10A6NMD0 228 aa13.67□□□□□ -0.22
SDF4-201ENST00000263741 SNRPCP09234 159 aaKnown RBP13.67□□□□□ -0.22
SDF4-201ENST00000263741 DCANP1Q8TF63 244 aa13.67□□□□□ -0.22
SDF4-201ENST00000263741 FRZBQ92765 325 aa13.67□□□□□ -0.22
SDF4-201ENST00000263741 PARLQ9H300 379 aa13.67□□□□□ -0.22
SDF4-201ENST00000263741 C19orf73Q9NVV2 129 aa13.67□□□□□ -0.22
SDF4-201ENST00000263741 TRAV5A0A0B4J249 113 aa13.66□□□□□ -0.22
SDF4-201ENST00000263741 OR11H12B2RN74 326 aa13.66□□□□□ -0.22
SDF4-201ENST00000263741 IGHV4-30-4P0DP06 118 aa13.66□□□□□ -0.22
SDF4-201ENST00000263741 OR10D4PQ8NGN7 298 aa13.66□□□□□ -0.22
SDF4-201ENST00000263741 RAB24Q969Q5 203 aa13.66□□□□□ -0.22
SDF4-201ENST00000263741 DNAJC4Q9NNZ3 241 aa13.66□□□□□ -0.22
SDF4-201ENST00000263741 SMAD5-AS1Q9Y6J3 95 aa13.66□□□□□ -0.22
SDF4-201ENST00000263741 GALR1P47211 349 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 RPL23P62829 140 aaKnown RBP13.65□□□□□ -0.22
SDF4-201ENST00000263741 PAFAH1B2P68402 229 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 PYY3Q5JQD4 70 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 C1orf194Q5T5A4 169 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 SPATA31B1PQ5VZV4 182 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 APRG1Q8IVJ8 170 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 NRN1Q9NPD7 142 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 KCNIP2Q9NS61 270 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 K7EQG2 157 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 ZNF688P0C7X2 276 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 OR1L4Q8NGR5 311 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 BTF3L4Q96K17 158 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 C17orf77Q96MU5 243 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 MAP6D1Q9H9H5 199 aa13.65□□□□□ -0.22
SDF4-201ENST00000263741 HMGB3O15347 200 aaKnown RBP13.64□□□□□ -0.23
SDF4-201ENST00000263741 PDE6DO43924 150 aa13.64□□□□□ -0.23
SDF4-201ENST00000263741 TGP01266 2768 aa13.64□□□□□ -0.23
SDF4-201ENST00000263741 KCNIP4Q6PIL6 250 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms