RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 TMEM158Q8WZ71 300 aa13.55□□□□□ -0.24
CROCCP3-201ENST00000263511 PRSS33Q8NF86 280 aa13.55□□□□□ -0.24
CROCCP3-201ENST00000263511 CREBBPQ92793 2442 aa13.55□□□□□ -0.24
CROCCP3-201ENST00000263511 GFRA4Q9GZZ7 299 aa13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 ZSWIM8A7E2V4 1837 aa13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 SIP14410 1827 aa13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 TRPT1Q86TN4 253 aaKnown RBP13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 C17orf58Q2M2W7 97 aa13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 AMN1Q8IY45 258 aa13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 LY6G5BQ8NDX9 201 aa13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 IGLV3-9A0A075B6K5 115 aa13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 A8MWV9 139 aa13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 NPC2P61916 151 aa13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 DMRTC2Q8IXT2 367 aaPredicted RBP13.54□□□□□ -0.24
CROCCP3-201ENST00000263511 DKK1O94907 266 aa13.53□□□□□ -0.24
CROCCP3-201ENST00000263511 DAD1P61803 113 aa13.53□□□□□ -0.24
CROCCP3-201ENST00000263511 TMEM75Q8N9X5 138 aa13.53□□□□□ -0.24
CROCCP3-201ENST00000263511 ZNF407Q9C0G0 2248 aa13.53□□□□□ -0.24
CROCCP3-201ENST00000263511 MYMXA0A1B0GTQ4 84 aa13.53□□□□□ -0.24
CROCCP3-201ENST00000263511 MST1LQ2TV78 715 aa13.53□□□□□ -0.24
CROCCP3-201ENST00000263511 WDR86Q86TI4 376 aa13.53□□□□□ -0.24
CROCCP3-201ENST00000263511 MCRIP2Q9BUT9 160 aaKnown RBP13.53□□□□□ -0.24
CROCCP3-201ENST00000263511 MRPL27Q9P0M9 148 aaKnown RBP13.53□□□□□ -0.24
CROCCP3-201ENST00000263511 NDUFA4O00483 81 aa13.52□□□□□ -0.24
CROCCP3-201ENST00000263511 SPINK13Q1W4C9 94 aa13.52□□□□□ -0.24
CROCCP3-201ENST00000263511 ZNF664Q8N3J9 261 aa13.52□□□□□ -0.24
CROCCP3-201ENST00000263511 ARTNQ5T4W7 220 aa13.52□□□□□ -0.24
CROCCP3-201ENST00000263511 DUX4L9Q6RFH8 374 aaPredicted RBP13.52□□□□□ -0.24
CROCCP3-201ENST00000263511 SIGMAR1Q99720 223 aa13.52□□□□□ -0.24
CROCCP3-201ENST00000263511 TP53BP1Q12888 1972 aaPredicted RBP13.52□□□□□ -0.25
CROCCP3-201ENST00000263511 F5H768 121 aa13.52□□□□□ -0.25
CROCCP3-201ENST00000263511 ARFGEF3Q5TH69 2177 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 NOTCH3Q9UM47 2321 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 PFN1P07737 140 aaKnown RBP13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 SMKR1H3BMG3 65 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 C1orf122Q6ZSJ8 110 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 LINC00479Q96M42 142 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 RLFQ13129 1914 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 TCTEX1D4Q5JR98 221 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 TIMM21Q9BVV7 248 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 ZNF503-AS2A6NEH8 195 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 SAMD5Q5TGI4 173 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 PRIMA1Q86XR5 153 aa13.51□□□□□ -0.25
CROCCP3-201ENST00000263511 GUSBP1Q15486 140 aa13.5□□□□□ -0.25
CROCCP3-201ENST00000263511 SLX1AQ9BQ83 275 aa13.5□□□□□ -0.25
CROCCP3-201ENST00000263511 F8WEM9 126 aa13.5□□□□□ -0.25
CROCCP3-201ENST00000263511 ZNF492Q9P255 531 aa13.5□□□□□ -0.25
CROCCP3-201ENST00000263511 KNCNA6PVL3 124 aa13.5□□□□□ -0.25
CROCCP3-201ENST00000263511 BCL6BQ8N143 479 aaPredicted RBP13.5□□□□□ -0.25
CROCCP3-201ENST00000263511 TMEM256Q8N2U0 113 aa13.5□□□□□ -0.25
CROCCP3-201ENST00000263511 TRBV19A0A075B6N1 114 aa13.5□□□□□ -0.25
CROCCP3-201ENST00000263511 DOCK10Q96BY6 2186 aa13.5□□□□□ -0.25
CROCCP3-201ENST00000263511 TRAV8-4A0A0B4J246 113 aa13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 LEPROTO15243 131 aa13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 SSBP2P81877 361 aaPredicted RBP13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 TNFRSF6BO95407 300 aa13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 APOC4P55056 127 aa13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 TICRRQ7Z2Z1 1910 aa13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 E9PQ18 207 aa13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 MRPL52Q86TS9 123 aaKnown RBP13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 LAMTOR3Q9UHA4 124 aa13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 FANCMQ8IYD8 2048 aa13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 Q71RC1 249 aaPredicted RBP13.49□□□□□ -0.25
CROCCP3-201ENST00000263511 GAGE12JA6NER3 117 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 CDK2AP2O75956 126 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 GAGE1Q13065 139 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 GAGE4Q13068 117 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 GAGE5Q13069 117 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 GAGE13Q4V321 117 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 C1orf147Q96MC9 270 aaPredicted RBP13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 KAAG1Q9UBP8 84 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 WISP1O95388 367 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 ELANEP08246 267 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 ZC2HC1BQ5TFG8 222 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 C8orf86Q6ZUL3 223 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 IGHV1OR15-1A0A075B7D0 117 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 SYS1-DBNDD2H3BUS1 97 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 SPXQ9BT56 116 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 FAM231BA6NCW3 169 aa13.48□□□□□ -0.25
CROCCP3-201ENST00000263511 KLK9Q9UKQ9 250 aa13.47□□□□□ -0.25
CROCCP3-201ENST00000263511 ANAPC10Q9UM13 185 aa13.47□□□□□ -0.25
CROCCP3-201ENST00000263511 EREGO14944 169 aa13.47□□□□□ -0.25
CROCCP3-201ENST00000263511 C3orf79P0CE67 100 aa13.47□□□□□ -0.25
CROCCP3-201ENST00000263511 TRBV25-1A0A075B6N4 114 aa13.47□□□□□ -0.25
CROCCP3-201ENST00000263511 INS-IGF2F8WCM5 200 aa13.46□□□□□ -0.25
CROCCP3-201ENST00000263511 C15orf65H3BRN8 121 aa13.46□□□□□ -0.25
CROCCP3-201ENST00000263511 CFHR3Q02985 330 aa13.46□□□□□ -0.25
CROCCP3-201ENST00000263511 AZU1P20160 251 aa13.46□□□□□ -0.25
CROCCP3-201ENST00000263511 UBE2V1Q13404 147 aa13.46□□□□□ -0.25
CROCCP3-201ENST00000263511 CDKN1BP46527 198 aa13.46□□□□□ -0.25
CROCCP3-201ENST00000263511 OVOL2Q9BRP0 275 aa13.46□□□□□ -0.25
CROCCP3-201ENST00000263511 A8MWP6 167 aa13.46□□□□□ -0.26
CROCCP3-201ENST00000263511 hDV102S1A0JD36 115 aa13.45□□□□□ -0.26
CROCCP3-201ENST00000263511 PRSS46E5RG02 174 aa13.45□□□□□ -0.26
CROCCP3-201ENST00000263511 CT83Q5H943 113 aa13.45□□□□□ -0.26
CROCCP3-201ENST00000263511 C8orf49Q96NF6 230 aa13.45□□□□□ -0.26
CROCCP3-201ENST00000263511 PCNX1Q96RV3 2341 aa13.45□□□□□ -0.26
CROCCP3-201ENST00000263511 ZNF561-AS1K7EIQ3 104 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms