RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 LINC00862A6NCI5 91 aa11.68□□□□□ -0.54
GYPC-201ENST00000259254 M0R3E3 92 aa11.68□□□□□ -0.54
GYPC-201ENST00000259254 PRB4P10163 310 aaPredicted RBP11.68□□□□□ -0.54
GYPC-201ENST00000259254 GNG5P63218 68 aa11.68□□□□□ -0.54
GYPC-201ENST00000259254 PEA15Q15121 130 aa11.68□□□□□ -0.54
GYPC-201ENST00000259254 PSG3Q16557 428 aa11.68□□□□□ -0.54
GYPC-201ENST00000259254 FAM24BQ8N5W8 94 aa11.68□□□□□ -0.54
GYPC-201ENST00000259254 TXNDC17Q9BRA2 123 aa11.68□□□□□ -0.54
GYPC-201ENST00000259254 TREM1Q9NP99 234 aa11.68□□□□□ -0.54
GYPC-201ENST00000259254 RAB19A4D1S5 217 aa11.67□□□□□ -0.54
GYPC-201ENST00000259254 C5orf17Q8NAS9 161 aa11.67□□□□□ -0.54
GYPC-201ENST00000259254 C20orf173Q96LM9 149 aa11.67□□□□□ -0.54
GYPC-201ENST00000259254 MED9Q9NWA0 146 aa11.67□□□□□ -0.54
GYPC-201ENST00000259254 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
GYPC-201ENST00000259254 F6UZH7 168 aa11.66□□□□□ -0.54
GYPC-201ENST00000259254 CEBPGP53567 150 aa11.66□□□□□ -0.54
GYPC-201ENST00000259254 CD81P60033 236 aa11.66□□□□□ -0.54
GYPC-201ENST00000259254 SRSF3P84103 164 aaKnown RBP11.66□□□□□ -0.54
GYPC-201ENST00000259254 OXLD1Q5BKU9 147 aa11.66□□□□□ -0.54
GYPC-201ENST00000259254 RPUSD4Q96CM3 377 aaKnown RBP11.66□□□□□ -0.54
GYPC-201ENST00000259254 MRPL53Q96EL3 112 aaKnown RBP11.66□□□□□ -0.54
GYPC-201ENST00000259254 EPDR1Q9UM22 224 aa11.66□□□□□ -0.54
GYPC-201ENST00000259254 SCO2A0A1W2PP80 73 aa11.65□□□□□ -0.54
GYPC-201ENST00000259254 PEX7O00628 323 aa11.65□□□□□ -0.54
GYPC-201ENST00000259254 PDE6DO43924 150 aa11.65□□□□□ -0.54
GYPC-201ENST00000259254 DEFB131AP59861 70 aa11.65□□□□□ -0.54
GYPC-201ENST00000259254 GOLT1AQ6ZVE7 132 aa11.65□□□□□ -0.54
GYPC-201ENST00000259254 CCDC28AQ8IWP9 274 aa11.65□□□□□ -0.54
GYPC-201ENST00000259254 TCEAL7Q9BRU2 100 aa11.65□□□□□ -0.54
GYPC-201ENST00000259254 MAP6D1Q9H9H5 199 aa11.65□□□□□ -0.54
GYPC-201ENST00000259254 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
GYPC-201ENST00000259254 PRAC2D3DTV9 90 aa11.64□□□□□ -0.55
GYPC-201ENST00000259254 TCRAP04437 139 aa11.64□□□□□ -0.55
GYPC-201ENST00000259254 AKR1C3P42330 323 aa11.64□□□□□ -0.55
GYPC-201ENST00000259254 CMC4P56277 68 aaPredicted RBP11.64□□□□□ -0.55
GYPC-201ENST00000259254 HIST1H2BAQ96A08 127 aa11.64□□□□□ -0.55
GYPC-201ENST00000259254 ATG101Q9BSB4 218 aa11.64□□□□□ -0.55
GYPC-201ENST00000259254 IGKV2-40A0A087WW87 121 aaPredicted RBP11.63□□□□□ -0.55
GYPC-201ENST00000259254 OR11H12B2RN74 326 aa11.63□□□□□ -0.55
GYPC-201ENST00000259254 DIRC3C9JPN6 131 aa11.63□□□□□ -0.55
GYPC-201ENST00000259254 K7EQM0 130 aa11.63□□□□□ -0.55
GYPC-201ENST00000259254 IGKV2D-40P01614 121 aaPredicted RBP11.63□□□□□ -0.55
GYPC-201ENST00000259254 DEFB1P60022 68 aa11.63□□□□□ -0.55
GYPC-201ENST00000259254 NDUFA5Q16718 116 aa11.63□□□□□ -0.55
GYPC-201ENST00000259254 BEAN1Q3B7T3 259 aa11.63□□□□□ -0.55
GYPC-201ENST00000259254 EBLN2Q6P2I7 272 aa11.63□□□□□ -0.55
GYPC-201ENST00000259254 GTSCR1Q86UQ5 136 aa11.63□□□□□ -0.55
GYPC-201ENST00000259254 CYB561D1Q8N8Q1 229 aa11.63□□□□□ -0.55
GYPC-201ENST00000259254 NOTCH1P46531 2555 aa11.62□□□□□ -0.55
GYPC-201ENST00000259254 F6UB75 175 aa11.62□□□□□ -0.55
GYPC-201ENST00000259254 SRP19P09132 144 aaKnown RBP11.62□□□□□ -0.55
GYPC-201ENST00000259254 CD7P09564 240 aa11.62□□□□□ -0.55
GYPC-201ENST00000259254 CNN1P51911 297 aaKnown RBP11.62□□□□□ -0.55
GYPC-201ENST00000259254 HIST1H1AQ02539 215 aaPredicted RBP11.62□□□□□ -0.55
GYPC-201ENST00000259254 ZNF674Q2M3X9 581 aa11.62□□□□□ -0.55
GYPC-201ENST00000259254 ODF3L2Q3SX64 289 aa11.62□□□□□ -0.55
GYPC-201ENST00000259254 UQCC3Q6UW78 93 aa11.62□□□□□ -0.55
GYPC-201ENST00000259254 OR10J6PQ8NGY7 276 aa11.62□□□□□ -0.55
GYPC-201ENST00000259254 CITED4Q96RK1 184 aa11.62□□□□□ -0.55
GYPC-201ENST00000259254 SMDT1Q9H4I9 107 aa11.62□□□□□ -0.55
GYPC-201ENST00000259254 ZMAT5Q9UDW3 170 aaKnown RBP11.62□□□□□ -0.55
GYPC-201ENST00000259254 SERTM2A0A1B0GWG4 89 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 KNCNA6PVL3 124 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 C9JQL5 133 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 G3V4G9 280 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 TMEM250H0YL14 139 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 ZNF705DP0CH99 300 aaPredicted RBP11.61□□□□□ -0.55
GYPC-201ENST00000259254 ZNF705BP0CI00 300 aaPredicted RBP11.61□□□□□ -0.55
GYPC-201ENST00000259254 UBE2G1P62253 170 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 APRG1Q8IVJ8 170 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 SLC7A5P1Q8MH63 180 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 ARL6IP6Q8N6S5 226 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 OR8A1Q8NGG7 326 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 C11orf52Q96A22 123 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 SGK494Q96LW2 274 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 SLC35B3Q9H1N7 401 aa11.61□□□□□ -0.55
GYPC-201ENST00000259254 TRAV34A0A0B4J273 112 aa11.6□□□□□ -0.55
GYPC-201ENST00000259254 ERCC8Q13216 396 aa11.6□□□□□ -0.55
GYPC-201ENST00000259254 ZNF124Q15973 351 aa11.6□□□□□ -0.55
GYPC-201ENST00000259254 ACTL10Q5JWF8 245 aa11.6□□□□□ -0.55
GYPC-201ENST00000259254 SAMD5Q5TGI4 173 aa11.6□□□□□ -0.55
GYPC-201ENST00000259254 FOXI2Q6ZQN5 318 aa11.6□□□□□ -0.55
GYPC-201ENST00000259254 LINC00479Q96M42 142 aa11.6□□□□□ -0.55
GYPC-201ENST00000259254 TRAV8-1A0A0A6YYK1 113 aa11.59□□□□□ -0.55
GYPC-201ENST00000259254 SFTA3P0C7M3 94 aa11.59□□□□□ -0.55
GYPC-201ENST00000259254 TMEM78Q5T7P6 136 aa11.59□□□□□ -0.55
GYPC-201ENST00000259254 EIF4E3Q8N5X7 224 aaKnown RBP11.59□□□□□ -0.55
GYPC-201ENST00000259254 OR4B1Q8NGF8 309 aa11.59□□□□□ -0.55
GYPC-201ENST00000259254 PRR25Q96S07 402 aa11.59□□□□□ -0.55
GYPC-201ENST00000259254 VGLL1Q99990 258 aa11.59□□□□□ -0.55
GYPC-201ENST00000259254 SAV1Q9H4B6 383 aaPredicted RBP11.59□□□□□ -0.55
GYPC-201ENST00000259254 PPP1R14DQ9NXH3 145 aa11.59□□□□□ -0.55
GYPC-201ENST00000259254 PRKDCP78527 4128 aaKnown RBP11.59□□□□□ -0.55
GYPC-201ENST00000259254 A0A0J9YX75 114 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 RBAKDNA6NC62 111 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 NDUFS6O75380 124 aaKnown RBP11.58□□□□□ -0.56
GYPC-201ENST00000259254 DUSP14O95147 198 aaKnown RBP11.58□□□□□ -0.56
GYPC-201ENST00000259254 IGKV3-20P01619 116 aa11.58□□□□□ -0.56
GYPC-201ENST00000259254 RPL35P42766 123 aaKnown RBP11.58□□□□□ -0.56
GYPC-201ENST00000259254 KPRPQ5T749 579 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms