RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CDC34P49427 236 aaPredicted RBP9.95□□□□□ -0.82
DDX39A-201ENST00000242776 RAB5CP51148 216 aa9.95□□□□□ -0.82
DDX39A-201ENST00000242776 TAS2R45P59539 299 aa9.95□□□□□ -0.82
DDX39A-201ENST00000242776 FAM122CQ6P4D5 195 aa9.95□□□□□ -0.82
DDX39A-201ENST00000242776 DPPA3Q6W0C5 159 aa9.95□□□□□ -0.82
DDX39A-201ENST00000242776 ACTR3CQ9C0K3 210 aaPredicted RBP9.95□□□□□ -0.82
DDX39A-201ENST00000242776 VSIRQ9H7M9 311 aa9.95□□□□□ -0.82
DDX39A-201ENST00000242776 SLC25A22Q9H936 323 aa9.95□□□□□ -0.82
DDX39A-201ENST00000242776 HSPG2P98160 4391 aa9.94□□□□□ -0.82
DDX39A-201ENST00000242776 BUB3O43684 328 aa9.94□□□□□ -0.82
DDX39A-201ENST00000242776 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
DDX39A-201ENST00000242776 P0DMU3 169 aa9.94□□□□□ -0.82
DDX39A-201ENST00000242776 FAM231AP0DMU4 169 aa9.94□□□□□ -0.82
DDX39A-201ENST00000242776 FAM231CP0DMU5 169 aa9.94□□□□□ -0.82
DDX39A-201ENST00000242776 KHDC3LQ587J8 217 aa9.94□□□□□ -0.82
DDX39A-201ENST00000242776 C16orf54Q6UWD8 224 aa9.94□□□□□ -0.82
DDX39A-201ENST00000242776 UBE2DNLQ8IWF7 75 aa9.94□□□□□ -0.82
DDX39A-201ENST00000242776 OR8I2Q8N0Y5 310 aa9.94□□□□□ -0.82
DDX39A-201ENST00000242776 X6R8D5 127 aa9.94□□□□□ -0.82
DDX39A-201ENST00000242776 HELTA6NFD8 242 aa9.93□□□□□ -0.82
DDX39A-201ENST00000242776 MIFP14174 115 aa9.93□□□□□ -0.82
DDX39A-201ENST00000242776 RPL7P18124 248 aaKnown RBP9.93□□□□□ -0.82
DDX39A-201ENST00000242776 GALR1P47211 349 aa9.93□□□□□ -0.82
DDX39A-201ENST00000242776 SULT1A2P50226 295 aa9.93□□□□□ -0.82
DDX39A-201ENST00000242776 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
DDX39A-201ENST00000242776 ALKAL2Q6UX46 152 aa9.93□□□□□ -0.82
DDX39A-201ENST00000242776 SIGLEC15Q6ZMC9 328 aa9.93□□□□□ -0.82
DDX39A-201ENST00000242776 BPIFA4PQ86YQ2 179 aa9.93□□□□□ -0.82
DDX39A-201ENST00000242776 SEPSECSQ9HD40 501 aaKnown RBP9.93□□□□□ -0.82
DDX39A-201ENST00000242776 RPRMQ9NS64 109 aa9.93□□□□□ -0.82
DDX39A-201ENST00000242776 CTXND1A0A1B0GTU2 59 aa9.92□□□□□ -0.82
DDX39A-201ENST00000242776 IFNA7P01567 189 aa9.92□□□□□ -0.82
DDX39A-201ENST00000242776 MIR17HGQ75NE6 70 aa9.92□□□□□ -0.82
DDX39A-201ENST00000242776 STXBP6Q8NFX7 210 aa9.92□□□□□ -0.82
DDX39A-201ENST00000242776 FAM213BQ8TBF2 198 aa9.92□□□□□ -0.82
DDX39A-201ENST00000242776 RNF141Q8WVD5 230 aa9.92□□□□□ -0.82
DDX39A-201ENST00000242776 GLMPQ8WWB7 406 aa9.92□□□□□ -0.82
DDX39A-201ENST00000242776 NDUFAF3Q9BU61 184 aa9.92□□□□□ -0.82
DDX39A-201ENST00000242776 OR7C2O60412 319 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 AMBPP02760 352 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 ZNF688P0C7X2 276 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 ACTL10Q5JWF8 245 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 SPATA31B1PQ5VZV4 182 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 TEX261Q6UWH6 196 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 PQLC2Q6ZP29 291 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 TRPT1Q86TN4 253 aaKnown RBP9.91□□□□□ -0.82
DDX39A-201ENST00000242776 TEX46H3BTG2 121 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 MEOX2P50222 304 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 MORN5Q5VZ52 161 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 LRRC20Q8TCA0 184 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 RAB24Q969Q5 203 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 SLC25A2Q9BXI2 301 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 TMEM14CQ9P0S9 112 aa9.91□□□□□ -0.82
DDX39A-201ENST00000242776 TRAV5A0A0B4J249 113 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 ZNF705EA8MWA4 302 aaPredicted RBP9.9□□□□□ -0.83
DDX39A-201ENST00000242776 CXorf1O96002 111 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 STAG3L2P0CL84 134 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 STAG3L3P0CL85 134 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 EMP1P54849 157 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 LGALS9BQ3B8N2 356 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 FAM74A1Q5RGS3 127 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 SAMD13Q5VXD3 122 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 MAPKAPK5-AS1Q8N8E1 139 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 PAXXQ9BUH6 204 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 OR51M1Q9H341 326 aa9.9□□□□□ -0.83
DDX39A-201ENST00000242776 MAP1LC3B2A6NCE7 125 aa9.89□□□□□ -0.83
DDX39A-201ENST00000242776 UBE2L3P68036 154 aaKnown RBP9.89□□□□□ -0.83
DDX39A-201ENST00000242776 BLOC1S1P78537 153 aa9.89□□□□□ -0.83
DDX39A-201ENST00000242776 GUK1Q16774 197 aa9.89□□□□□ -0.83
DDX39A-201ENST00000242776 MORN3Q6PF18 240 aaPredicted RBP9.89□□□□□ -0.83
DDX39A-201ENST00000242776 ZNF680Q8NEM1 530 aa9.89□□□□□ -0.83
DDX39A-201ENST00000242776 MAP1LC3BQ9GZQ8 125 aa9.89□□□□□ -0.83
DDX39A-201ENST00000242776 A0A087X0K7 114 aa9.88□□□□□ -0.83
DDX39A-201ENST00000242776 HMGB3O15347 200 aaKnown RBP9.88□□□□□ -0.83
DDX39A-201ENST00000242776 HBE1P02100 147 aa9.88□□□□□ -0.83
DDX39A-201ENST00000242776 H2AFB1P0C5Y9 115 aa9.88□□□□□ -0.83
DDX39A-201ENST00000242776 ARL14EPLP0DKL9 152 aa9.88□□□□□ -0.83
DDX39A-201ENST00000242776 FHITP49789 147 aa9.88□□□□□ -0.83
DDX39A-201ENST00000242776 ZNF726P1Q15940 193 aa9.88□□□□□ -0.83
DDX39A-201ENST00000242776 LCN15Q6UWW0 184 aa9.88□□□□□ -0.83
DDX39A-201ENST00000242776 SAT2Q96F10 170 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-201ENST00000242776 FAM167A-AS1Q96KT0 104 aa9.88□□□□□ -0.83
DDX39A-201ENST00000242776 NRN1Q9NPD7 142 aa9.88□□□□□ -0.83
DDX39A-201ENST00000242776 NACAE9PAV3 2078 aa9.88□□□□□ -0.83
DDX39A-201ENST00000242776 TRAV2A0A0B4J234 112 aa9.87□□□□□ -0.83
DDX39A-201ENST00000242776 C16orf90A8MZG2 172 aa9.87□□□□□ -0.83
DDX39A-201ENST00000242776 MRPS12O15235 138 aaKnown RBP9.87□□□□□ -0.83
DDX39A-201ENST00000242776 PYYP10082 97 aa9.87□□□□□ -0.83
DDX39A-201ENST00000242776 HIST1H1EP10412 219 aaKnown RBP9.87□□□□□ -0.83
DDX39A-201ENST00000242776 HTN3P15516 51 aa9.87□□□□□ -0.83
DDX39A-201ENST00000242776 SSX7Q7RTT5 188 aa9.87□□□□□ -0.83
DDX39A-201ENST00000242776 IQCF2Q8IXL9 164 aa9.87□□□□□ -0.83
DDX39A-201ENST00000242776 SFT2D1Q8WV19 159 aa9.87□□□□□ -0.83
DDX39A-201ENST00000242776 MBD3L1Q8WWY6 194 aa9.87□□□□□ -0.83
DDX39A-201ENST00000242776 TMEM167BQ9NRX6 74 aa9.87□□□□□ -0.83
DDX39A-201ENST00000242776 XCL2Q9UBD3 114 aa9.87□□□□□ -0.83
DDX39A-201ENST00000242776 K7EQG2 157 aa9.86□□□□□ -0.83
DDX39A-201ENST00000242776 IGLC2P0DOY2 106 aa9.86□□□□□ -0.83
DDX39A-201ENST00000242776 PDE6HQ13956 83 aa9.86□□□□□ -0.83
DDX39A-201ENST00000242776 SOHLH1Q5JUK2 328 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms