RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ETDBQ3ZM63 59 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 DUX3Q96PT4 197 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 CKS2P33552 79 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 C10orf55Q5SWW7 151 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 ZNF295-AS1Q8N0V1 137 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 LINC01587Q99440 93 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 DKK4Q9UBT3 224 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
COPA-201ENST00000241704 KRTAP27-1Q3LI81 207 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 SCGB1D4Q6XE38 83 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 A0A1B0GW15 77 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 C2orf70A6NJV1 201 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.85□□□□□ -0.99
COPA-201ENST00000241704 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.85□□□□□ -0.99
COPA-201ENST00000241704 PAX8Q06710 450 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 VGLL1Q99990 258 aa8.85□□□□□ -0.99
COPA-201ENST00000241704 ZNF56Q15929 161 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 C19orf54Q5BKX5 351 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 FAM231DQ6ZW35 169 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 PRELID3AQ96N28 172 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 BEX4Q9NWD9 120 aaPredicted RBP8.84□□□□□ -0.99
COPA-201ENST00000241704 BUB1B-PAK6H3BSN5 160 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 PVRIGQ6DKI7 326 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 HBDP02042 147 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 C5orf64Q2M2E5 130 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 MYOZ3Q8TDC0 251 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 RNF125Q96EQ8 232 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 FMC1Q96HJ9 113 aa8.84□□□□□ -0.99
COPA-201ENST00000241704 TRGV2A0A075B6R0 118 aa8.84□□□□□ -1
COPA-201ENST00000241704 C15orf32Q32M92 178 aa8.84□□□□□ -1
COPA-201ENST00000241704 KLHL30-AS1Q8NEE0 82 aa8.84□□□□□ -1
COPA-201ENST00000241704 WFDC12Q8WWY7 111 aa8.84□□□□□ -1
COPA-201ENST00000241704 C22orf46C9J442 243 aa8.83□□□□□ -1
COPA-201ENST00000241704 TMEM262E9PQX1 116 aa8.83□□□□□ -1
COPA-201ENST00000241704 SIVA1O15304 175 aa8.83□□□□□ -1
COPA-201ENST00000241704 GRNP28799 593 aaKnown RBP8.83□□□□□ -1
COPA-201ENST00000241704 HERVK_113P61574 105 aa8.83□□□□□ -1
COPA-201ENST00000241704 CEP295Q9C0D2 2601 aa8.83□□□□□ -1
COPA-201ENST00000241704 TEX36Q5VZQ5 186 aa8.83□□□□□ -1
COPA-201ENST00000241704 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
COPA-201ENST00000241704 GNG5P63218 68 aa8.83□□□□□ -1
COPA-201ENST00000241704 EPDR1Q9UM22 224 aa8.83□□□□□ -1
COPA-201ENST00000241704 PIP4P2Q8N4L2 257 aa8.82□□□□□ -1
COPA-201ENST00000241704 OR5AN1Q8NGI8 311 aa8.82□□□□□ -1
COPA-201ENST00000241704 C18orf15Q96N68 181 aa8.82□□□□□ -1
COPA-201ENST00000241704 CRIP3Q6Q6R5 217 aa8.82□□□□□ -1
COPA-201ENST00000241704 LCNL1Q6ZST4 164 aa8.82□□□□□ -1
COPA-201ENST00000241704 KIR3DL3Q8N743 410 aa8.82□□□□□ -1
COPA-201ENST00000241704 MAP1LC3AQ9H492 121 aa8.82□□□□□ -1
COPA-201ENST00000241704 SS18L2Q9UHA2 77 aa8.82□□□□□ -1
COPA-201ENST00000241704 ARHGAP21Q5T5U3 1957 aa8.82□□□□□ -1
COPA-201ENST00000241704 TCTEX1D4Q5JR98 221 aa8.82□□□□□ -1
COPA-201ENST00000241704 RUSC1-AS1Q66K80 236 aa8.82□□□□□ -1
COPA-201ENST00000241704 IGKV1-16P04430 117 aa8.82□□□□□ -1
COPA-201ENST00000241704 PSMB2P49721 201 aa8.82□□□□□ -1
COPA-201ENST00000241704 LINC00173Q6ZV60 143 aa8.82□□□□□ -1
COPA-201ENST00000241704 SPATA12Q7Z6I5 190 aa8.82□□□□□ -1
COPA-201ENST00000241704 LINC00479Q96M42 142 aa8.82□□□□□ -1
COPA-201ENST00000241704 ZFYVE26Q68DK2 2539 aa8.82□□□□□ -1
COPA-201ENST00000241704 IGKV3OR2-268A0A0C4DH90 116 aa8.81□□□□□ -1
COPA-201ENST00000241704 PYYP10082 97 aa8.81□□□□□ -1
COPA-201ENST00000241704 UBE2E1P51965 193 aa8.81□□□□□ -1
COPA-201ENST00000241704 TP73-AS1Q9UF72 201 aa8.81□□□□□ -1
COPA-201ENST00000241704 ORMDL3Q8N138 153 aa8.81□□□□□ -1
COPA-201ENST00000241704 SIGLEC9Q9Y336 463 aa8.81□□□□□ -1
COPA-201ENST00000241704 PMS2P5A8MQ11 134 aa8.81□□□□□ -1
COPA-201ENST00000241704 GGTLC3B5MD39 225 aa8.81□□□□□ -1
COPA-201ENST00000241704 M0R381 172 aa8.81□□□□□ -1
COPA-201ENST00000241704 DUSP14O95147 198 aaKnown RBP8.81□□□□□ -1
COPA-201ENST00000241704 CHAC1Q9BUX1 264 aa8.81□□□□□ -1
COPA-201ENST00000241704 SPTBN4Q9H254 2564 aa8.81□□□□□ -1
COPA-201ENST00000241704 CRXO43186 299 aaPredicted RBP8.81□□□□□ -1
COPA-201ENST00000241704 C17orf58Q2M2W7 97 aa8.81□□□□□ -1
COPA-201ENST00000241704 Q9H3A6 140 aa8.81□□□□□ -1
COPA-201ENST00000241704 MYO9AB2RTY4 2548 aa8.81□□□□□ -1
COPA-201ENST00000241704 FREM1Q5H8C1 2179 aa8.8□□□□□ -1
COPA-201ENST00000241704 FASNP49327 2511 aaKnown RBP8.8□□□□□ -1
COPA-201ENST00000241704 TRAV5A0A0B4J249 113 aa8.8□□□□□ -1
COPA-201ENST00000241704 IGHV1-69DA0A0B4J2H0 117 aa8.8□□□□□ -1
COPA-201ENST00000241704 C15orf65H3BRN8 121 aa8.8□□□□□ -1
COPA-201ENST00000241704 IGHV1-69P01742 117 aa8.8□□□□□ -1
COPA-201ENST00000241704 DLX1P56177 255 aa8.8□□□□□ -1
COPA-201ENST00000241704 GAGE5Q13069 117 aa8.8□□□□□ -1
COPA-201ENST00000241704 GAGE6Q13070 117 aa8.8□□□□□ -1
COPA-201ENST00000241704 KLF17Q5JT82 389 aaPredicted RBP8.8□□□□□ -1
COPA-201ENST00000241704 Q6AWC8 147 aa8.8□□□□□ -1
COPA-201ENST00000241704 GLMPQ8WWB7 406 aa8.8□□□□□ -1
COPA-201ENST00000241704 SLC50A1Q9BRV3 221 aa8.8□□□□□ -1
COPA-201ENST00000241704 TMEM160Q9NX00 188 aa8.8□□□□□ -1
COPA-201ENST00000241704 ZNF462Q96JM2 2506 aa8.8□□□□□ -1
COPA-201ENST00000241704 NDUFS7O75251 213 aa8.8□□□□□ -1
COPA-201ENST00000241704 LINC01545Q5VT33 79 aa8.8□□□□□ -1
COPA-201ENST00000241704 C11orf53Q8IXP5 236 aa8.8□□□□□ -1
COPA-201ENST00000241704 DOPEY1Q5JWR5 2465 aa8.8□□□□□ -1
COPA-201ENST00000241704 GAGE2BQ13066 116 aa8.8□□□□□ -1
COPA-201ENST00000241704 GAGE2EQ4V326 116 aa8.8□□□□□ -1
COPA-201ENST00000241704 DUX4L9Q6RFH8 374 aaPredicted RBP8.8□□□□□ -1
COPA-201ENST00000241704 FGF23Q9GZV9 251 aaPredicted RBP8.8□□□□□ -1
COPA-201ENST00000241704 GAGE2DQ9UEU5 116 aa8.8□□□□□ -1
COPA-201ENST00000241704 JMJD1CQ15652 2540 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms