RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 UBE2CO00762 179 aa10.06□□□□□ -0.8
UPK1A-201ENST00000222275 ARL14EPLP0DKL9 152 aa10.06□□□□□ -0.8
UPK1A-201ENST00000222275 HLA-DRB4P13762 266 aa10.06□□□□□ -0.8
UPK1A-201ENST00000222275 CSN1S1P47710 185 aa10.06□□□□□ -0.8
UPK1A-201ENST00000222275 NKX2-5P52952 324 aaPredicted RBP10.06□□□□□ -0.8
UPK1A-201ENST00000222275 ACTL10Q5JWF8 245 aa10.06□□□□□ -0.8
UPK1A-201ENST00000222275 MORN3Q6PF18 240 aaPredicted RBP10.06□□□□□ -0.8
UPK1A-201ENST00000222275 RXFP4Q8TDU9 374 aa10.06□□□□□ -0.8
UPK1A-201ENST00000222275 ZNF503Q96F45 646 aa10.06□□□□□ -0.8
UPK1A-201ENST00000222275 CLUHP3Q96NS8 147 aa10.06□□□□□ -0.8
UPK1A-201ENST00000222275 HLA-DRB4X5D2U9 266 aa10.06□□□□□ -0.8
UPK1A-201ENST00000222275 MAP1LC3B2A6NCE7 125 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 HMGB3O15347 200 aaKnown RBP10.05□□□□□ -0.8
UPK1A-201ENST00000222275 NDUFB4O95168 129 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 SNRPCP09234 159 aaKnown RBP10.05□□□□□ -0.8
UPK1A-201ENST00000222275 H2AFB1P0C5Y9 115 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 GCHFRP30047 84 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 SULT1A2P50226 295 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 CASC10Q5T4H9 136 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 MUC7Q8TAX7 377 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 FAM213BQ8TBF2 198 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 SUN5Q8TC36 379 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 MBD3L1Q8WWY6 194 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 RPUSD4Q96CM3 377 aaKnown RBP10.05□□□□□ -0.8
UPK1A-201ENST00000222275 CITED4Q96RK1 184 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 NKX6-2Q9C056 277 aaPredicted RBP10.05□□□□□ -0.8
UPK1A-201ENST00000222275 MAP1LC3BQ9GZQ8 125 aa10.05□□□□□ -0.8
UPK1A-201ENST00000222275 A0A0J9YX75 114 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 H3BMM0 161 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 C3orf84H3BNL1 204 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 H3BTX0 84 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 SLC17A3O00476 420 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 PPT1P50897 306 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 RANP62826 216 aaKnown RBP10.04□□□□□ -0.8
UPK1A-201ENST00000222275 TRPT1Q86TN4 253 aaKnown RBP10.04□□□□□ -0.8
UPK1A-201ENST00000222275 IQCF2Q8IXL9 164 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 OR10J6PQ8NGY7 276 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 CMTM2Q8TAZ6 248 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 SFT2D1Q8WV19 159 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 C20orf173Q96LM9 149 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 C1QTNF4Q9BXJ3 329 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 CSTL1Q9H114 145 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 ZMAT4Q9H898 229 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 OTORQ9NRC9 128 aa10.04□□□□□ -0.8
UPK1A-201ENST00000222275 A0A1W2PRE2 83 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 KNCNA6PVL3 124 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 HBE1P02100 147 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 ICAM4Q14773 271 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 ZNF726P1Q15940 193 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 ZNF124Q15973 351 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 IGFL4Q6B9Z1 124 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 OR8A1Q8NGG7 326 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 Q9H3A6 140 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 PPP1R14DQ9NXH3 145 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 EPPK1P58107 5090 aaKnown RBP10.03□□□□□ -0.8
UPK1A-201ENST00000222275 ALMS1Q8TCU4 4167 aa10.03□□□□□ -0.8
UPK1A-201ENST00000222275 RPL35AP18077 110 aaKnown RBP10.02□□□□□ -0.81
UPK1A-201ENST00000222275 ZFAND6Q6FIF0 208 aa10.02□□□□□ -0.81
UPK1A-201ENST00000222275 Q6ZWC4 215 aa10.02□□□□□ -0.81
UPK1A-201ENST00000222275 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.81
UPK1A-201ENST00000222275 OR4B1Q8NGF8 309 aa10.02□□□□□ -0.81
UPK1A-201ENST00000222275 ARL2-SNX15V9GYD0 113 aa10.02□□□□□ -0.81
UPK1A-201ENST00000222275 TRAV1-1A0A0B4J248 108 aa10.01□□□□□ -0.81
UPK1A-201ENST00000222275 SERTM2A0A1B0GWG4 89 aa10.01□□□□□ -0.81
UPK1A-201ENST00000222275 PGPA6NDG6 321 aa10.01□□□□□ -0.81
UPK1A-201ENST00000222275 EIF3GO75821 320 aaKnown RBP eCLIP10.01□□□□□ -0.81
UPK1A-201ENST00000222275 AMBPP02760 352 aa10.01□□□□□ -0.81
UPK1A-201ENST00000222275 HLA-DMBP28068 263 aa10.01□□□□□ -0.81
UPK1A-201ENST00000222275 FHITP49789 147 aa10.01□□□□□ -0.81
UPK1A-201ENST00000222275 BLOC1S1P78537 153 aa10.01□□□□□ -0.81
UPK1A-201ENST00000222275 HIST1H1AQ02539 215 aaPredicted RBP10.01□□□□□ -0.81
UPK1A-201ENST00000222275 SSX7Q7RTT5 188 aa10.01□□□□□ -0.81
UPK1A-201ENST00000222275 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
UPK1A-201ENST00000222275 PLA2G2EQ9NZK7 142 aa10.01□□□□□ -0.81
UPK1A-201ENST00000222275 RBAKDNA6NC62 111 aa10□□□□□ -0.81
UPK1A-201ENST00000222275 A8MTW9 85 aa10□□□□□ -0.81
UPK1A-201ENST00000222275 ZNF705FA8MVS1 300 aaPredicted RBP10□□□□□ -0.81
UPK1A-201ENST00000222275 ZNF705EA8MWA4 302 aaPredicted RBP10□□□□□ -0.81
UPK1A-201ENST00000222275 F6UB75 175 aa10□□□□□ -0.81
UPK1A-201ENST00000222275 BOLA2-SMG1P6H3BVE0 249 aa10□□□□□ -0.81
UPK1A-201ENST00000222275 K7EQM0 130 aa10□□□□□ -0.81
UPK1A-201ENST00000222275 SLC25A5P05141 298 aaKnown RBP10□□□□□ -0.81
UPK1A-201ENST00000222275 TSPOP30536 169 aa10□□□□□ -0.81
UPK1A-201ENST00000222275 CNN1P51911 297 aaKnown RBP10□□□□□ -0.81
UPK1A-201ENST00000222275 FGF8P55075 233 aaPredicted RBP10□□□□□ -0.81
UPK1A-201ENST00000222275 ALKAL2Q6UX46 152 aa10□□□□□ -0.81
UPK1A-201ENST00000222275 LINC00477Q96M19 166 aa10□□□□□ -0.81
UPK1A-201ENST00000222275 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
UPK1A-201ENST00000222275 BOLA1Q9Y3E2 137 aa10□□□□□ -0.81
UPK1A-201ENST00000222275 M0R3E3 92 aa9.99□□□□□ -0.81
UPK1A-201ENST00000222275 CA1P00915 261 aaPredicted RBP9.99□□□□□ -0.81
UPK1A-201ENST00000222275 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
UPK1A-201ENST00000222275 C5orf17Q8NAS9 161 aa9.99□□□□□ -0.81
UPK1A-201ENST00000222275 ODF3Q96PU9 254 aa9.99□□□□□ -0.81
UPK1A-201ENST00000222275 TP53TG1Q9Y2A0 90 aa9.99□□□□□ -0.81
UPK1A-201ENST00000222275 FBLL1A6NHQ2 334 aaKnown RBP9.98□□□□□ -0.81
UPK1A-201ENST00000222275 NPIPB6E9PJ23 425 aa9.98□□□□□ -0.81
UPK1A-201ENST00000222275 F6UZH7 168 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms