RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 FXYD7P58549 80 aa10.78□□□□□ -0.68
UPK3A-201ENST00000216211 LYZP61626 148 aa10.78□□□□□ -0.68
UPK3A-201ENST00000216211 ZNF726P1Q15940 193 aa10.78□□□□□ -0.68
UPK3A-201ENST00000216211 ACOT6Q3I5F7 207 aaPredicted RBP10.78□□□□□ -0.68
UPK3A-201ENST00000216211 LINC00052Q96N35 136 aa10.78□□□□□ -0.68
UPK3A-201ENST00000216211 TMEM218A2RU14 115 aa10.77□□□□□ -0.69
UPK3A-201ENST00000216211 AGPAT2O15120 278 aa10.77□□□□□ -0.69
UPK3A-201ENST00000216211 M6PRP20645 277 aa10.77□□□□□ -0.69
UPK3A-201ENST00000216211 RPL29P47914 159 aaKnown RBP10.77□□□□□ -0.69
UPK3A-201ENST00000216211 SRSF3P84103 164 aaKnown RBP10.77□□□□□ -0.69
UPK3A-201ENST00000216211 AKR1C1Q04828 323 aa10.77□□□□□ -0.69
UPK3A-201ENST00000216211 PEA15Q15121 130 aa10.77□□□□□ -0.69
UPK3A-201ENST00000216211 SFT2D1Q8WV19 159 aa10.77□□□□□ -0.69
UPK3A-201ENST00000216211 ACTR3CQ9C0K3 210 aaPredicted RBP10.77□□□□□ -0.69
UPK3A-201ENST00000216211 SAV1Q9H4B6 383 aaPredicted RBP10.77□□□□□ -0.69
UPK3A-201ENST00000216211 SMDT1Q9H4I9 107 aa10.77□□□□□ -0.69
UPK3A-201ENST00000216211 CTXND1A0A1B0GTU2 59 aa10.76□□□□□ -0.69
UPK3A-201ENST00000216211 CCL20P78556 96 aa10.76□□□□□ -0.69
UPK3A-201ENST00000216211 GUK1Q16774 197 aa10.76□□□□□ -0.69
UPK3A-201ENST00000216211 ZNF705AQ6ZN79 300 aaPredicted RBP10.76□□□□□ -0.69
UPK3A-201ENST00000216211 OR10G4Q8NGN3 311 aa10.76□□□□□ -0.69
UPK3A-201ENST00000216211 OR10G9Q8NGN4 311 aa10.76□□□□□ -0.69
UPK3A-201ENST00000216211 OR10G7Q8NGN6 311 aa10.76□□□□□ -0.69
UPK3A-201ENST00000216211 TREM1Q9NP99 234 aa10.76□□□□□ -0.69
UPK3A-201ENST00000216211 SLC39A9Q9NUM3 307 aa10.76□□□□□ -0.69
UPK3A-201ENST00000216211 SLC45A2Q9UMX9 530 aa10.76□□□□□ -0.69
UPK3A-201ENST00000216211 PXMP4Q9Y6I8 212 aa10.76□□□□□ -0.69
UPK3A-201ENST00000216211 IGHV3OR16-12A0A075B7B8 117 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 IGKV1OR2-108A0A075B7D4 117 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 SOCS3O14543 225 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 AMBPP02760 352 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 FABP1P07148 127 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 ID1P41134 155 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 C10orf91Q5T1B1 145 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 MIC13Q5XKP0 118 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 FOXI2Q6ZQN5 318 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 SSX7Q7RTT5 188 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 THAP8Q8NA92 274 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 OR4B1Q8NGF8 309 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 NEU1Q99519 415 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 TRGV9Q99603 122 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 KRTAP17-1Q9BYP8 105 aa10.75□□□□□ -0.69
UPK3A-201ENST00000216211 MAP1LC3B2A6NCE7 125 aa10.74□□□□□ -0.69
UPK3A-201ENST00000216211 RBFOX3A6NFN3 312 aa10.74□□□□□ -0.69
UPK3A-201ENST00000216211 ZNF705FA8MVS1 300 aaPredicted RBP10.74□□□□□ -0.69
UPK3A-201ENST00000216211 LINC00869P0C866 280 aa10.74□□□□□ -0.69
UPK3A-201ENST00000216211 ZNF705DP0CH99 300 aaPredicted RBP10.74□□□□□ -0.69
UPK3A-201ENST00000216211 ZNF705BP0CI00 300 aaPredicted RBP10.74□□□□□ -0.69
UPK3A-201ENST00000216211 PSMB3P49720 205 aa10.74□□□□□ -0.69
UPK3A-201ENST00000216211 EMP1P54849 157 aa10.74□□□□□ -0.69
UPK3A-201ENST00000216211 C1orf194Q5T5A4 169 aa10.74□□□□□ -0.69
UPK3A-201ENST00000216211 LCN15Q6UWW0 184 aa10.74□□□□□ -0.69
UPK3A-201ENST00000216211 MAP1LC3BQ9GZQ8 125 aa10.74□□□□□ -0.69
UPK3A-201ENST00000216211 F6UB75 175 aa10.73□□□□□ -0.69
UPK3A-201ENST00000216211 B2MP61769 119 aa10.73□□□□□ -0.69
UPK3A-201ENST00000216211 ZNF506Q5JVG8 444 aa10.73□□□□□ -0.69
UPK3A-201ENST00000216211 FAM122CQ6P4D5 195 aa10.73□□□□□ -0.69
UPK3A-201ENST00000216211 OR8I2Q8N0Y5 310 aa10.73□□□□□ -0.69
UPK3A-201ENST00000216211 RAB24Q969Q5 203 aa10.73□□□□□ -0.69
UPK3A-201ENST00000216211 NDUFAF3Q9BU61 184 aa10.73□□□□□ -0.69
UPK3A-201ENST00000216211 SLC35B3Q9H1N7 401 aa10.73□□□□□ -0.69
UPK3A-201ENST00000216211 PKHD1P08F94 4074 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 KIAA1109Q2LD37 5005 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 A0A1B0GV50 99 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 SMIM9A6NGZ8 99 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 C9JQL5 133 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 SPART-AS1P0CW21 52 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 CDC34P49427 236 aaPredicted RBP10.72□□□□□ -0.69
UPK3A-201ENST00000216211 CYP2G1PQ6ZSU1 146 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 CCDC28AQ8IWP9 274 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 C20orf173Q96LM9 149 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 SEC11CQ9BY50 192 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 EIF5A2Q9GZV4 153 aaKnown RBP10.72□□□□□ -0.69
UPK3A-201ENST00000216211 SLC25A22Q9H936 323 aa10.72□□□□□ -0.69
UPK3A-201ENST00000216211 CARHSP1Q9Y2V2 147 aaKnown RBP10.72□□□□□ -0.69
UPK3A-201ENST00000216211 A0A0J9YX75 114 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 LOC102723971A0A1B0GUV8 181 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 A0A1W2PPV4 95 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 TMEM189A5PLL7 270 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 ISLRO14498 428 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 P0DMU3 169 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 FAM231AP0DMU4 169 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 FAM231CP0DMU5 169 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 GATA2P23769 480 aaPredicted RBP10.71□□□□□ -0.69
UPK3A-201ENST00000216211 FGF8P55075 233 aaPredicted RBP10.71□□□□□ -0.69
UPK3A-201ENST00000216211 PSG9Q00887 426 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 KHDC3LQ587J8 217 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 GCSAMLQ5JQS6 135 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 FAM78BQ5VT40 261 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 EBLN2Q6P2I7 272 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 POM121L12Q8N7R1 296 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 C16orf92Q96LL3 132 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 CLUHP3Q96NS8 147 aa10.71□□□□□ -0.69
UPK3A-201ENST00000216211 PKD1P98161 4303 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 F8W036 122 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 NDUFS6O75380 124 aaKnown RBP10.7□□□□□ -0.7
UPK3A-201ENST00000216211 IFNA1P01562 189 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 SFTA3P0C7M3 94 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 ADCYAP1P18509 176 aa10.7□□□□□ -0.7
UPK3A-201ENST00000216211 TAGLN2P37802 199 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms